RNA–Protein interactions for RNA: ENST00000498347.1

FAM3D-205, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 2

Gene FAM3D, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-205ENST00000498347 NFE4Q86UQ8 179 aa6.21□□□□□ -1.42
FAM3D-205ENST00000498347 C14orf178Q8N769 122 aaPredicted RBP6.21□□□□□ -1.42
FAM3D-205ENST00000498347 RPL39LQ96EH5 51 aaKnown RBP6.21□□□□□ -1.42
FAM3D-205ENST00000498347 MRPL16Q9NX20 251 aaKnown RBP6.21□□□□□ -1.42
FAM3D-205ENST00000498347 IGLV4-69A0A075B6H9 119 aa6.2□□□□□ -1.42
FAM3D-205ENST00000498347 IGHV3OR16-12A0A075B7B8 117 aa6.2□□□□□ -1.42
FAM3D-205ENST00000498347 A0A0J9YX75 114 aa6.2□□□□□ -1.42
FAM3D-205ENST00000498347 A0A0J9YY99 117 aa6.2□□□□□ -1.42
FAM3D-205ENST00000498347 CRYGDP07320 174 aa6.2□□□□□ -1.42
FAM3D-205ENST00000498347 RNASE4P34096 147 aaKnown RBP6.2□□□□□ -1.42
FAM3D-205ENST00000498347 CRYBA4P53673 196 aa6.2□□□□□ -1.42
FAM3D-205ENST00000498347 SRSF9Q13242 221 aaKnown RBP eCLIP6.2□□□□□ -1.42
FAM3D-205ENST00000498347 ZNF876PQ49A33 203 aa6.2□□□□□ -1.42
FAM3D-205ENST00000498347 SLC25A29Q8N8R3 303 aa6.2□□□□□ -1.42
FAM3D-205ENST00000498347 C9orf85Q96MD7 179 aa6.2□□□□□ -1.42
FAM3D-205ENST00000498347 LINC01600Q96MT4 127 aa6.2□□□□□ -1.42
FAM3D-205ENST00000498347 LRP1Q07954 4544 aaKnown RBP6.2□□□□□ -1.42
FAM3D-205ENST00000498347 F5H768 121 aa6.19□□□□□ -1.42
FAM3D-205ENST00000498347 APOMO95445 188 aa6.19□□□□□ -1.42
FAM3D-205ENST00000498347 TSPAN13O95857 204 aa6.19□□□□□ -1.42
FAM3D-205ENST00000498347 FOXI1Q12951 378 aa6.19□□□□□ -1.42
FAM3D-205ENST00000498347 ETDBQ3ZM63 59 aa6.19□□□□□ -1.42
FAM3D-205ENST00000498347 SUMO4Q6EEV6 95 aa6.19□□□□□ -1.42
FAM3D-205ENST00000498347 FAM159AQ6UWV7 190 aa6.19□□□□□ -1.42
FAM3D-205ENST00000498347 PPDPFLQ8WWR9 84 aa6.19□□□□□ -1.42
FAM3D-205ENST00000498347 H3BMM0 161 aa6.18□□□□□ -1.42
FAM3D-205ENST00000498347 LEPROTO15243 131 aa6.18□□□□□ -1.42
FAM3D-205ENST00000498347 DUSP14O95147 198 aaKnown RBP6.18□□□□□ -1.42
FAM3D-205ENST00000498347 TSHBP01222 138 aa6.18□□□□□ -1.42
FAM3D-205ENST00000498347 IGHV3-30P01768 117 aa6.18□□□□□ -1.42
FAM3D-205ENST00000498347 IGHV3-30-5P0DP03 117 aa6.18□□□□□ -1.42
FAM3D-205ENST00000498347 Q6ZQT7 251 aa6.18□□□□□ -1.42
FAM3D-205ENST00000498347 C10orf126Q8N4M7 172 aa6.18□□□□□ -1.42
FAM3D-205ENST00000498347 PLEKHB2Q96CS7 222 aa6.18□□□□□ -1.42
FAM3D-205ENST00000498347 UPK3BQ9BT76 320 aa6.18□□□□□ -1.42
FAM3D-205ENST00000498347 A0A087WTM6 91 aa6.17□□□□□ -1.42
FAM3D-205ENST00000498347 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.17□□□□□ -1.42
FAM3D-205ENST00000498347 A0A0B4J2C4 111 aa6.17□□□□□ -1.42
FAM3D-205ENST00000498347 SDHAF1A6NFY7 115 aa6.17□□□□□ -1.42
FAM3D-205ENST00000498347 TMEM262E9PQX1 116 aa6.17□□□□□ -1.42
FAM3D-205ENST00000498347 GNRH2O43555 120 aa6.17□□□□□ -1.42
FAM3D-205ENST00000498347 LGALS3P17931 250 aaKnown RBP6.17□□□□□ -1.42
FAM3D-205ENST00000498347 PIK3CD-AS1Q5SR53 167 aa6.17□□□□□ -1.42
FAM3D-205ENST00000498347 TEN1Q86WV5 123 aa6.17□□□□□ -1.42
FAM3D-205ENST00000498347 GTSF1LQ9H1H1 148 aa6.17□□□□□ -1.42
FAM3D-205ENST00000498347 TRGV11A0A075B6L2 103 aa6.16□□□□□ -1.42
FAM3D-205ENST00000498347 IGHV3-16A0A0C4DH30 117 aa6.16□□□□□ -1.42
FAM3D-205ENST00000498347 TMEM223A0PJW6 202 aa6.16□□□□□ -1.42
FAM3D-205ENST00000498347 A8MWV9 139 aa6.16□□□□□ -1.42
FAM3D-205ENST00000498347 J3QQQ9 107 aa6.16□□□□□ -1.42
FAM3D-205ENST00000498347 AMTNQ6UX39 209 aa6.16□□□□□ -1.42
FAM3D-205ENST00000498347 SH2D6Q7Z4S9 175 aa6.16□□□□□ -1.42
FAM3D-205ENST00000498347 DCANP1Q8TF63 244 aa6.16□□□□□ -1.42
FAM3D-205ENST00000498347 PTH2Q96A98 100 aa6.16□□□□□ -1.42
FAM3D-205ENST00000498347 AMELXQ99217 191 aa6.16□□□□□ -1.42
FAM3D-205ENST00000498347 PRO1854Q9UHT4 67 aa6.16□□□□□ -1.42
FAM3D-205ENST00000498347 PYGO1Q9Y3Y4 419 aa6.16□□□□□ -1.42
FAM3D-205ENST00000498347 LYRM9A8MSI8 78 aa6.15□□□□□ -1.42
FAM3D-205ENST00000498347 DEFB130BP0DP73 79 aa6.15□□□□□ -1.42
FAM3D-205ENST00000498347 DEFB130AP0DP74 79 aa6.15□□□□□ -1.42
FAM3D-205ENST00000498347 SMCPP49901 116 aaPredicted RBP6.15□□□□□ -1.42
FAM3D-205ENST00000498347 SMAGPQ0VAQ4 97 aa6.15□□□□□ -1.42
FAM3D-205ENST00000498347 ESRGQ1W209 222 aa6.15□□□□□ -1.42
FAM3D-205ENST00000498347 LINC00528Q8N1L1 170 aa6.15□□□□□ -1.42
FAM3D-205ENST00000498347 LRP2P98164 4655 aa6.14□□□□□ -1.43
FAM3D-205ENST00000498347 IGHV1OR15-1A0A075B7D0 117 aa6.14□□□□□ -1.43
FAM3D-205ENST00000498347 LOC107984156A0A0G2JMH3 177 aa6.14□□□□□ -1.43
FAM3D-205ENST00000498347 I3L3M4 83 aa6.14□□□□□ -1.43
FAM3D-205ENST00000498347 J3KRW8 73 aa6.14□□□□□ -1.43
FAM3D-205ENST00000498347 M0QY20 66 aa6.14□□□□□ -1.43
FAM3D-205ENST00000498347 ATP5G1P05496 136 aa6.14□□□□□ -1.43
FAM3D-205ENST00000498347 CFC1BP0CG36 223 aa6.14□□□□□ -1.43
FAM3D-205ENST00000498347 CFC1P0CG37 223 aa6.14□□□□□ -1.43
FAM3D-205ENST00000498347 PSMB2P49721 201 aa6.14□□□□□ -1.43
FAM3D-205ENST00000498347 SNRPD3P62318 126 aaKnown RBP6.14□□□□□ -1.43
FAM3D-205ENST00000498347 ARL17AQ8IVW1 177 aa6.14□□□□□ -1.43
FAM3D-205ENST00000498347 C20orf203Q8NBC4 194 aa6.14□□□□□ -1.43
FAM3D-205ENST00000498347 F5H697 171 aa6.13□□□□□ -1.43
FAM3D-205ENST00000498347 F6UB75 175 aa6.13□□□□□ -1.43
FAM3D-205ENST00000498347 M0R2P5 195 aa6.13□□□□□ -1.43
FAM3D-205ENST00000498347 TCL1BO95988 128 aa6.13□□□□□ -1.43
FAM3D-205ENST00000498347 DNAH10OSP0CZ25 163 aa6.13□□□□□ -1.43
FAM3D-205ENST00000498347 TMEM170BQ5T4T1 132 aa6.13□□□□□ -1.43
FAM3D-205ENST00000498347 C1orf158Q8N1D5 194 aa6.13□□□□□ -1.43
FAM3D-205ENST00000498347 CDIP1Q9H305 208 aa6.13□□□□□ -1.43
FAM3D-205ENST00000498347 FAM30AQ9NZY2 134 aa6.13□□□□□ -1.43
FAM3D-205ENST00000498347 FAT3Q8TDW7 4589 aa6.12□□□□□ -1.43
FAM3D-205ENST00000498347 A8MTW9 85 aa6.12□□□□□ -1.43
FAM3D-205ENST00000498347 RHODO00212 210 aa6.12□□□□□ -1.43
FAM3D-205ENST00000498347 IGKV3-20P01619 116 aa6.12□□□□□ -1.43
FAM3D-205ENST00000498347 IGHV3-33P01772 117 aa6.12□□□□□ -1.43
FAM3D-205ENST00000498347 ZNF22P17026 224 aaPredicted RBP6.12□□□□□ -1.43
FAM3D-205ENST00000498347 TSPEAR-AS2P59090 65 aa6.12□□□□□ -1.43
FAM3D-205ENST00000498347 ZNF56Q15929 161 aa6.12□□□□□ -1.43
FAM3D-205ENST00000498347 TMEM263Q8WUH6 116 aaKnown RBP6.12□□□□□ -1.43
FAM3D-205ENST00000498347 CLUHP3Q96NS8 147 aa6.12□□□□□ -1.43
FAM3D-205ENST00000498347 ERG28Q9UKR5 140 aa6.12□□□□□ -1.43
FAM3D-205ENST00000498347 TNFRSF18Q9Y5U5 241 aa6.12□□□□□ -1.43
FAM3D-205ENST00000498347 IGLV5-52A0A0A0MRZ9 124 aa6.11□□□□□ -1.43
FAM3D-205ENST00000498347 TRAV12-3A0A0B4J271 114 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms