RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 IGKV3OR2-268A0A0C4DH90 116 aa5.81□□□□□ -1.48
SF3A1-210ENST00000498259 APOMO95445 188 aa5.81□□□□□ -1.48
SF3A1-210ENST00000498259 TAL2Q16559 108 aa5.81□□□□□ -1.48
SF3A1-210ENST00000498259 MIAQ16674 131 aa5.81□□□□□ -1.48
SF3A1-210ENST00000498259 ESRGQ1W209 222 aa5.81□□□□□ -1.48
SF3A1-210ENST00000498259 LINC01556Q5JQF7 62 aa5.81□□□□□ -1.48
SF3A1-210ENST00000498259 CD164L2Q6UWJ8 174 aa5.81□□□□□ -1.48
SF3A1-210ENST00000498259 C10orf126Q8N4M7 172 aa5.81□□□□□ -1.48
SF3A1-210ENST00000498259 CDKN2A-AS1Q9UH64 79 aa5.81□□□□□ -1.48
SF3A1-210ENST00000498259 DNAH3Q8TD57 4116 aa5.8□□□□□ -1.48
SF3A1-210ENST00000498259 A0A087WZ39 114 aa5.8□□□□□ -1.48
SF3A1-210ENST00000498259 PRSS2P07478 247 aa5.8□□□□□ -1.48
SF3A1-210ENST00000498259 IGHV3-30-3P0DP02 117 aa5.8□□□□□ -1.48
SF3A1-210ENST00000498259 MALP21145 153 aa5.8□□□□□ -1.48
SF3A1-210ENST00000498259 HERV-K104P63124 156 aa5.8□□□□□ -1.48
SF3A1-210ENST00000498259 CTAG1AP78358 180 aa5.8□□□□□ -1.48
SF3A1-210ENST00000498259 HSD52Q0P140 79 aa5.8□□□□□ -1.48
SF3A1-210ENST00000498259 PCP2Q8IVA1 136 aa5.8□□□□□ -1.48
SF3A1-210ENST00000498259 RMI2Q96E14 147 aa5.8□□□□□ -1.48
SF3A1-210ENST00000498259 PRR34Q9NV39 138 aa5.8□□□□□ -1.48
SF3A1-210ENST00000498259 IGKV2D-26A0A0A0MRZ7 120 aa5.79□□□□□ -1.48
SF3A1-210ENST00000498259 TRAV8-3A0A0A6YYJ7 113 aa5.79□□□□□ -1.48
SF3A1-210ENST00000498259 TMEM238LA0A1B0GVL6 79 aa5.79□□□□□ -1.48
SF3A1-210ENST00000498259 A6NJY4 79 aa5.79□□□□□ -1.48
SF3A1-210ENST00000498259 TMEM238C9JI98 176 aa5.79□□□□□ -1.48
SF3A1-210ENST00000498259 COX7A2LO14548 114 aa5.79□□□□□ -1.48
SF3A1-210ENST00000498259 SRSF9Q13242 221 aaKnown RBP eCLIP5.79□□□□□ -1.48
SF3A1-210ENST00000498259 Q6ZVH6 145 aa5.79□□□□□ -1.48
SF3A1-210ENST00000498259 UPK3BQ9BT76 320 aa5.79□□□□□ -1.48
SF3A1-210ENST00000498259 KLK12Q9UKR0 248 aa5.79□□□□□ -1.48
SF3A1-210ENST00000498259 IGHV3OR16-9A0A0B4J2B5 98 aa5.78□□□□□ -1.48
SF3A1-210ENST00000498259 IGLV5-39A0A0G2JS06 123 aa5.78□□□□□ -1.48
SF3A1-210ENST00000498259 A6NDN8 102 aa5.78□□□□□ -1.48
SF3A1-210ENST00000498259 SPINK8P0C7L1 97 aa5.78□□□□□ -1.48
SF3A1-210ENST00000498259 DNAH10OSP0CZ25 163 aa5.78□□□□□ -1.48
SF3A1-210ENST00000498259 CXCL5P42830 114 aa5.78□□□□□ -1.48
SF3A1-210ENST00000498259 XCL1P47992 114 aa5.78□□□□□ -1.48
SF3A1-210ENST00000498259 ZFAND6Q6FIF0 208 aa5.78□□□□□ -1.48
SF3A1-210ENST00000498259 UBE2DNLQ8IWF7 75 aa5.78□□□□□ -1.48
SF3A1-210ENST00000498259 CHCHD10Q8WYQ3 142 aaPredicted RBP5.78□□□□□ -1.48
SF3A1-210ENST00000498259 HIST1H4GQ99525 98 aa5.78□□□□□ -1.48
SF3A1-210ENST00000498259 NDUFA12Q9UI09 145 aa5.78□□□□□ -1.48
SF3A1-210ENST00000498259 COX11Q9Y6N1 276 aa5.78□□□□□ -1.48
SF3A1-210ENST00000498259 IGHV3-64A0A075B6Q5 118 aa5.77□□□□□ -1.49
SF3A1-210ENST00000498259 SMIM1B2RUZ4 78 aa5.77□□□□□ -1.49
SF3A1-210ENST00000498259 NDUFA1O15239 70 aa5.77□□□□□ -1.49
SF3A1-210ENST00000498259 IGHV3-30P01768 117 aa5.77□□□□□ -1.49
SF3A1-210ENST00000498259 IGHV3-33P01772 117 aa5.77□□□□□ -1.49
SF3A1-210ENST00000498259 IGHV3-30-5P0DP03 117 aa5.77□□□□□ -1.49
SF3A1-210ENST00000498259 COX6A2Q02221 97 aa5.77□□□□□ -1.49
SF3A1-210ENST00000498259 C6orf226Q5I0X4 101 aa5.77□□□□□ -1.49
SF3A1-210ENST00000498259 COL5A1-AS1Q5SY13 56 aa5.77□□□□□ -1.49
SF3A1-210ENST00000498259 UBE2WQ96B02 151 aa5.77□□□□□ -1.49
SF3A1-210ENST00000498259 C1orf43Q9BWL3 253 aa5.77□□□□□ -1.49
SF3A1-210ENST00000498259 TIMM17BO60830 172 aa5.76□□□□□ -1.49
SF3A1-210ENST00000498259 PTTG1IPP53801 180 aa5.76□□□□□ -1.49
SF3A1-210ENST00000498259 CKS1BP61024 79 aa5.76□□□□□ -1.49
SF3A1-210ENST00000498259 CFAP161Q6P656 301 aa5.76□□□□□ -1.49
SF3A1-210ENST00000498259 WFDC10BQ8IUB3 73 aa5.76□□□□□ -1.49
SF3A1-210ENST00000498259 MAPKAPK5-AS1Q8N8E1 139 aa5.76□□□□□ -1.49
SF3A1-210ENST00000498259 COX7B2Q8TF08 81 aa5.76□□□□□ -1.49
SF3A1-210ENST00000498259 SPANXB1Q9NS25 103 aaPredicted RBP5.76□□□□□ -1.49
SF3A1-210ENST00000498259 F8WDY8 70 aa5.75□□□□□ -1.49
SF3A1-210ENST00000498259 RPL24P83731 157 aaKnown RBP5.75□□□□□ -1.49
SF3A1-210ENST00000498259 BATFQ16520 125 aa5.75□□□□□ -1.49
SF3A1-210ENST00000498259 CLPSL2Q6UWE3 100 aa5.75□□□□□ -1.49
SF3A1-210ENST00000498259 C2orf91Q6ZV80 131 aa5.75□□□□□ -1.49
SF3A1-210ENST00000498259 C5orf38Q86SI9 138 aa5.75□□□□□ -1.49
SF3A1-210ENST00000498259 Q8IZM0 81 aa5.75□□□□□ -1.49
SF3A1-210ENST00000498259 Q9H8V8 135 aa5.75□□□□□ -1.49
SF3A1-210ENST00000498259 TOMM7Q9P0U1 55 aa5.75□□□□□ -1.49
SF3A1-210ENST00000498259 LINC00588Q9Y4M8 146 aa5.75□□□□□ -1.49
SF3A1-210ENST00000498259 A0A0J9YXY3 114 aa5.74□□□□□ -1.49
SF3A1-210ENST00000498259 GAGE12HA6NDE8 117 aa5.74□□□□□ -1.49
SF3A1-210ENST00000498259 IFITM1P13164 125 aa5.74□□□□□ -1.49
SF3A1-210ENST00000498259 HINT1P49773 126 aaPredicted RBP5.74□□□□□ -1.49
SF3A1-210ENST00000498259 TTC32Q5I0X7 151 aa5.74□□□□□ -1.49
SF3A1-210ENST00000498259 ENHOQ6UWT2 76 aa5.74□□□□□ -1.49
SF3A1-210ENST00000498259 CEND1Q8N111 149 aa5.74□□□□□ -1.49
SF3A1-210ENST00000498259 MUC7Q8TAX7 377 aa5.74□□□□□ -1.49
SF3A1-210ENST00000498259 ORAOV1Q8WV07 137 aa5.74□□□□□ -1.49
SF3A1-210ENST00000498259 TM2D2Q9BX73 214 aa5.74□□□□□ -1.49
SF3A1-210ENST00000498259 TP73-AS1Q9UF72 201 aa5.74□□□□□ -1.49
SF3A1-210ENST00000498259 IGLV10-54A0A075B6I4 117 aa5.73□□□□□ -1.49
SF3A1-210ENST00000498259 IBA57-AS1B1ANH7 110 aa5.73□□□□□ -1.49
SF3A1-210ENST00000498259 MEIG1Q5JSS6 88 aa5.73□□□□□ -1.49
SF3A1-210ENST00000498259 BVES-AS1Q5T3Y7 98 aa5.73□□□□□ -1.49
SF3A1-210ENST00000498259 SNHG12Q9BXW3 62 aa5.73□□□□□ -1.49
SF3A1-210ENST00000498259 TTTY13Q9BZ97 58 aa5.73□□□□□ -1.49
SF3A1-210ENST00000498259 APLNQ9ULZ1 77 aa5.73□□□□□ -1.49
SF3A1-210ENST00000498259 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.72□□□□□ -1.49
SF3A1-210ENST00000498259 J3QL48 77 aa5.72□□□□□ -1.49
SF3A1-210ENST00000498259 ZNF561-AS1K7EIQ3 104 aa5.72□□□□□ -1.49
SF3A1-210ENST00000498259 TSPEAR-AS2P59090 65 aa5.72□□□□□ -1.49
SF3A1-210ENST00000498259 FOXI1Q12951 378 aa5.72□□□□□ -1.49
SF3A1-210ENST00000498259 COX17Q14061 63 aa5.72□□□□□ -1.49
SF3A1-210ENST00000498259 SPANXDQ9BXN6 97 aa5.72□□□□□ -1.49
SF3A1-210ENST00000498259 PPDPFQ9H3Y8 114 aa5.72□□□□□ -1.49
SF3A1-210ENST00000498259 SPANXCQ9NY87 97 aa5.72□□□□□ -1.49
SF3A1-210ENST00000498259 IGKV2D-24A0A075B6R9 120 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms