RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 IGHV1-58A0A0C4DH39 117 aa10.52□□□□□ -0.73
FAM3A-220ENST00000497506 HBDP02042 147 aa10.52□□□□□ -0.73
FAM3A-220ENST00000497506 S100A1P23297 94 aa10.52□□□□□ -0.73
FAM3A-220ENST00000497506 COX6A2Q02221 97 aa10.52□□□□□ -0.73
FAM3A-220ENST00000497506 LINC01620Q4KN68 170 aa10.52□□□□□ -0.73
FAM3A-220ENST00000497506 C5orf38Q86SI9 138 aa10.52□□□□□ -0.73
FAM3A-220ENST00000497506 CHCHD1Q96BP2 118 aaKnown RBP10.52□□□□□ -0.73
FAM3A-220ENST00000497506 CNBPP62633 177 aaKnown RBP10.51□□□□□ -0.73
FAM3A-220ENST00000497506 PDZD11Q5EBL8 140 aa10.51□□□□□ -0.73
FAM3A-220ENST00000497506 FAM19A3Q7Z5A8 133 aa10.51□□□□□ -0.73
FAM3A-220ENST00000497506 CDK2AP2O75956 126 aa10.5□□□□□ -0.73
FAM3A-220ENST00000497506 BAGE3Q86Y29 109 aa10.5□□□□□ -0.73
FAM3A-220ENST00000497506 C9orf163Q8N9P6 203 aa10.5□□□□□ -0.73
FAM3A-220ENST00000497506 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.49□□□□□ -0.73
FAM3A-220ENST00000497506 MALP21145 153 aa10.49□□□□□ -0.73
FAM3A-220ENST00000497506 LINC00310P59036 64 aa10.49□□□□□ -0.73
FAM3A-220ENST00000497506 APOBP04114 4563 aaKnown RBP10.48□□□□□ -0.73
FAM3A-220ENST00000497506 LINC00526Q96FQ7 95 aa10.48□□□□□ -0.73
FAM3A-220ENST00000497506 CST9LQ9H4G1 147 aa10.48□□□□□ -0.73
FAM3A-220ENST00000497506 FAM30AQ9NZY2 134 aa10.48□□□□□ -0.73
FAM3A-220ENST00000497506 A0A087WZ39 114 aa10.47□□□□□ -0.73
FAM3A-220ENST00000497506 PMVKQ15126 192 aa10.47□□□□□ -0.73
FAM3A-220ENST00000497506 DNAH8Q96JB1 4490 aa10.46□□□□□ -0.73
FAM3A-220ENST00000497506 IGHV3-64A0A075B6Q5 118 aa10.46□□□□□ -0.73
FAM3A-220ENST00000497506 A0A0J9YXV3 536 aa10.46□□□□□ -0.73
FAM3A-220ENST00000497506 SERF1AO75920 110 aa10.46□□□□□ -0.73
FAM3A-220ENST00000497506 APOMO95445 188 aa10.46□□□□□ -0.73
FAM3A-220ENST00000497506 XGP55808 180 aa10.46□□□□□ -0.73
FAM3A-220ENST00000497506 Q6ZSA8 131 aa10.46□□□□□ -0.73
FAM3A-220ENST00000497506 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.45□□□□□ -0.74
FAM3A-220ENST00000497506 ZNF561-AS1K7EIQ3 104 aa10.45□□□□□ -0.74
FAM3A-220ENST00000497506 HSBP1O75506 76 aa10.45□□□□□ -0.74
FAM3A-220ENST00000497506 ATP5LO75964 103 aa10.45□□□□□ -0.74
FAM3A-220ENST00000497506 SEC11AP67812 179 aa10.45□□□□□ -0.74
FAM3A-220ENST00000497506 FAM19A2Q8N3H0 131 aa10.45□□□□□ -0.74
FAM3A-220ENST00000497506 OR10D4PQ8NGN7 298 aa10.45□□□□□ -0.74
FAM3A-220ENST00000497506 IGLV4-69A0A075B6H9 119 aa10.44□□□□□ -0.74
FAM3A-220ENST00000497506 NUPR1O60356 82 aa10.44□□□□□ -0.74
FAM3A-220ENST00000497506 HIST1H2BKO60814 126 aa10.44□□□□□ -0.74
FAM3A-220ENST00000497506 HIST1H2BJP06899 126 aa10.44□□□□□ -0.74
FAM3A-220ENST00000497506 HIST1H2BOP23527 126 aa10.44□□□□□ -0.74
FAM3A-220ENST00000497506 HIST1H2BBP33778 126 aa10.44□□□□□ -0.74
FAM3A-220ENST00000497506 HIST1H2BDP58876 126 aa10.44□□□□□ -0.74
FAM3A-220ENST00000497506 HIST1H2BCP62807 126 aa10.44□□□□□ -0.74
FAM3A-220ENST00000497506 HERVK_113P63121 156 aa10.44□□□□□ -0.74
FAM3A-220ENST00000497506 HIST2H2BEQ16778 126 aa10.44□□□□□ -0.74
FAM3A-220ENST00000497506 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.44□□□□□ -0.74
FAM3A-220ENST00000497506 SDIM1Q6ZPB5 146 aa10.44□□□□□ -0.74
FAM3A-220ENST00000497506 LINC01561Q8N1V8 128 aa10.44□□□□□ -0.74
FAM3A-220ENST00000497506 ORAOV1Q8WV07 137 aa10.44□□□□□ -0.74
FAM3A-220ENST00000497506 HIST1H2BHQ93079 126 aa10.44□□□□□ -0.74
FAM3A-220ENST00000497506 HIST1H2BNQ99877 126 aa10.44□□□□□ -0.74
FAM3A-220ENST00000497506 HIST1H2BMQ99879 126 aa10.44□□□□□ -0.74
FAM3A-220ENST00000497506 RYR1P21817 5038 aa10.44□□□□□ -0.74
FAM3A-220ENST00000497506 TINCRA0A1B0GVN0 87 aa10.43□□□□□ -0.74
FAM3A-220ENST00000497506 SPAG11BQ08648 103 aa10.43□□□□□ -0.74
FAM3A-220ENST00000497506 GEMIN7Q9H840 131 aaKnown RBP10.43□□□□□ -0.74
FAM3A-220ENST00000497506 CDKN2A-AS1Q9UH64 79 aa10.43□□□□□ -0.74
FAM3A-220ENST00000497506 SYCNQ0VAF6 134 aa10.42□□□□□ -0.74
FAM3A-220ENST00000497506 C2orf48Q96LS8 159 aa10.42□□□□□ -0.74
FAM3A-220ENST00000497506 HERC2O95714 4834 aa10.42□□□□□ -0.74
FAM3A-220ENST00000497506 IGLV5-45A0A087WSX0 123 aa10.41□□□□□ -0.74
FAM3A-220ENST00000497506 NDUFA6P56556 154 aa10.41□□□□□ -0.74
FAM3A-220ENST00000497506 KIAA0087Q14695 138 aa10.41□□□□□ -0.74
FAM3A-220ENST00000497506 KRTAP17-1Q9BYP8 105 aa10.41□□□□□ -0.74
FAM3A-220ENST00000497506 HSPG2P98160 4391 aa10.41□□□□□ -0.74
FAM3A-220ENST00000497506 HAMPP81172 84 aa10.4□□□□□ -0.74
FAM3A-220ENST00000497506 Q6ZRU5 148 aa10.4□□□□□ -0.74
FAM3A-220ENST00000497506 IFI27L1Q96BM0 104 aa10.4□□□□□ -0.74
FAM3A-220ENST00000497506 CARD19Q96LW7 228 aa10.4□□□□□ -0.74
FAM3A-220ENST00000497506 CAMK2N2Q96S95 79 aa10.4□□□□□ -0.74
FAM3A-220ENST00000497506 IGLC3P0DOY3 106 aa10.39□□□□□ -0.75
FAM3A-220ENST00000497506 LINC00469Q8N7U9 141 aa10.39□□□□□ -0.75
FAM3A-220ENST00000497506 PANO1I0J062 215 aa10.38□□□□□ -0.75
FAM3A-220ENST00000497506 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.38□□□□□ -0.75
FAM3A-220ENST00000497506 TRAV12-1A0A0B4J245 112 aa10.37□□□□□ -0.75
FAM3A-220ENST00000497506 F8WDY8 70 aa10.37□□□□□ -0.75
FAM3A-220ENST00000497506 LEPROTL1O95214 131 aa10.37□□□□□ -0.75
FAM3A-220ENST00000497506 CHAC1Q9BUX1 264 aa10.37□□□□□ -0.75
FAM3A-220ENST00000497506 SMIM1B2RUZ4 78 aa10.36□□□□□ -0.75
FAM3A-220ENST00000497506 CIRBPQ14011 172 aaKnown RBP10.36□□□□□ -0.75
FAM3A-220ENST00000497506 C10orf25Q5T742 122 aa10.36□□□□□ -0.75
FAM3A-220ENST00000497506 SCXQ7RTU7 201 aa10.36□□□□□ -0.75
FAM3A-220ENST00000497506 NDUFA1O15239 70 aa10.35□□□□□ -0.75
FAM3A-220ENST00000497506 RNF151Q2KHN1 245 aa10.35□□□□□ -0.75
FAM3A-220ENST00000497506 UNQ6190/PRO20217Q6UXQ8 127 aa10.35□□□□□ -0.75
FAM3A-220ENST00000497506 CIRBP-AS1Q8TBR5 109 aa10.35□□□□□ -0.75
FAM3A-220ENST00000497506 PACRGQ96M98 296 aaPredicted RBP10.35□□□□□ -0.75
FAM3A-220ENST00000497506 MRPL35Q9NZE8 188 aaKnown RBP10.35□□□□□ -0.75
FAM3A-220ENST00000497506 CHTOPQ9Y3Y2 248 aaKnown RBP10.35□□□□□ -0.75
FAM3A-220ENST00000497506 C11orf86A6NJI1 115 aa10.34□□□□□ -0.75
FAM3A-220ENST00000497506 SPINK8P0C7L1 97 aa10.34□□□□□ -0.75
FAM3A-220ENST00000497506 CHTF8P0CG12 524 aa10.34□□□□□ -0.75
FAM3A-220ENST00000497506 FABP4P15090 132 aa10.34□□□□□ -0.75
FAM3A-220ENST00000497506 ZNF22P17026 224 aaPredicted RBP10.34□□□□□ -0.75
FAM3A-220ENST00000497506 COA6Q5JTJ3 125 aaKnown RBP10.34□□□□□ -0.75
FAM3A-220ENST00000497506 C2orf82Q6UX34 121 aa10.34□□□□□ -0.75
FAM3A-220ENST00000497506 Q8IZM0 81 aa10.34□□□□□ -0.75
FAM3A-220ENST00000497506 TOMM7Q9P0U1 55 aa10.34□□□□□ -0.75
FAM3A-220ENST00000497506 C6orf48Q9UBA6 75 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms