RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 MYO7BQ6PIF6 2116 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 TRAV8-1A0A0A6YYK1 113 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.3□□□□□ -2.2
CBX3-208ENST00000497498 TRAV17A0A0B4J275 112 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 IGKV2-24A0A0C4DH68 120 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 LOC107984156A0A0G2JMH3 177 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 TRBV7-6A0A0J9YX20 115 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 TRBV10-2A0A0K0K1G8 114 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 LOC107984640A0A0U1RRK4 108 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 LCE6AA0A183 80 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 FAM236DA0A1B0GTK5 79 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 A0A1B0GWA3 101 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 A0A1B0GXF2 115 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 K7EMI3 77 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 CCL16O15467 120 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 SLC25A20O43772 301 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 LYZL6O75951 148 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 HMGN2P05204 90 aaKnown RBP1.3□□□□□ -2.2
CBX3-208ENST00000497498 CD7P09564 240 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 INAFM2P0DMQ5 153 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 FAM236CP0DP71 79 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 FGF6P10767 208 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 LGALS3P17931 250 aaKnown RBP1.3□□□□□ -2.2
CBX3-208ENST00000497498 FOXA3P55318 350 aaPredicted RBP1.3□□□□□ -2.2
CBX3-208ENST00000497498 UBE2D3P61077 147 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 UBE2D2P62837 147 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 QRFPP83859 136 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 RPL18Q07020 188 aaKnown RBP1.3□□□□□ -2.2
CBX3-208ENST00000497498 CST6Q15828 149 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 C4orf26Q17RF5 130 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 DEFB113Q30KQ7 82 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 DEFB134Q4QY38 66 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 SLC48A1Q6P1K1 146 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 C22orf39Q6P5X5 142 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 SCGB1D4Q6XE38 83 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 LYZL2Q7Z4W2 148 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 LINC00596Q86U02 117 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 LYPD6Q86Y78 171 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 PRR15Q8IV56 129 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 ARL17AQ8IVW1 177 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 FAM19A2Q8N3H0 131 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 SLC25A45Q8N413 288 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 RPP25LQ8N5L8 163 aaKnown RBP1.3□□□□□ -2.2
CBX3-208ENST00000497498 SERP2Q8N6R1 65 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 OR8A1Q8NGG7 326 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 BORCS8Q96FH0 119 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 Q96M85 177 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 NXT2Q9NPJ8 142 aaKnown RBP1.3□□□□□ -2.2
CBX3-208ENST00000497498 TAS2R4Q9NYW5 299 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 TP73-AS1Q9UF72 201 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 EPDR1Q9UM22 224 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 HILPDAQ9Y5L2 63 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 OBSL1O75147 1896 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 NUP210Q8TEM1 1887 aaPredicted RBP1.3□□□□□ -2.2
CBX3-208ENST00000497498 SCN3AQ9NY46 2000 aa1.3□□□□□ -2.2
CBX3-208ENST00000497498 PLXNA2O75051 1894 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 NCOA6Q14686 2063 aaPredicted RBP1.29□□□□□ -2.2
CBX3-208ENST00000497498 TRBV25-1A0A075B6N4 114 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 TRAV3A0A0B4J244 114 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 TRAV26-2A0A0B4J265 109 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 TRAV4A0A0B4J268 109 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 A0A0B4J2C4 111 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 LOC389332A0A1B0GUA5 103 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 hADV29S1A0JD25 119 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 RBAKDNA6NC62 111 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 C3orf84H3BNL1 204 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 H3BVH4 76 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 K7EQS6 105 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 UBE2L6O14933 153 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 PPP1R17O96001 155 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 IGHV1-46P01743 117 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 TCRAP04437 139 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 CCL1P22362 96 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 SSR2P43308 183 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 UBE2D1P51668 147 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 FXYD2P54710 66 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 PLGLAQ15195 96 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 CENPWQ5EE01 88 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 DEFB121Q5J5C9 76 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 LINC01590Q5TEZ4 76 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 Q5XG85 94 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 FAM104BQ5XKR9 115 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 HRCT1Q6UXD1 115 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 Q6ZRU5 148 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 FAM19A1Q7Z5A9 133 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 DEFB119Q8N690 84 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 C3orf56Q8N813 242 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 DAND5Q8N907 189 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 C10orf105Q8TEF2 133 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 DYNLRB2Q8TF09 96 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 ARHGAP5-AS1Q96IT6 56 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 CARD19Q96LW7 228 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 IGF2BP2-AS1Q96M15 143 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 NAA38Q9BRA0 125 aaKnown RBP1.29□□□□□ -2.2
CBX3-208ENST00000497498 NPCDR1Q9BY65 106 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 RNASE7Q9H1E1 156 aaKnown RBP1.29□□□□□ -2.2
CBX3-208ENST00000497498 CXCL16Q9H2A7 254 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 RBM12B-AS1Q9P1G2 102 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 LINC00527Q9UJ94 153 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 PKIGQ9Y2B9 76 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms