RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 RNF213Q63HN8 5207 aa3.68□□□□□ -1.82
MSH5-219ENST00000497269 A0A096LNI7 61 aa3.67□□□□□ -1.82
MSH5-219ENST00000497269 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.67□□□□□ -1.82
MSH5-219ENST00000497269 IFNA1P01562 189 aa3.67□□□□□ -1.82
MSH5-219ENST00000497269 IGLC6P0CF74 106 aa3.67□□□□□ -1.82
MSH5-219ENST00000497269 RPS10P46783 165 aaKnown RBP3.67□□□□□ -1.82
MSH5-219ENST00000497269 CNBPP62633 177 aaKnown RBP3.67□□□□□ -1.82
MSH5-219ENST00000497269 COTL1Q14019 142 aa3.67□□□□□ -1.82
MSH5-219ENST00000497269 TMEM97Q5BJF2 176 aa3.67□□□□□ -1.82
MSH5-219ENST00000497269 AMMECR1LQ6DCA0 310 aa3.67□□□□□ -1.82
MSH5-219ENST00000497269 UQCC3Q6UW78 93 aa3.67□□□□□ -1.82
MSH5-219ENST00000497269 COMMD7Q86VX2 200 aa3.67□□□□□ -1.82
MSH5-219ENST00000497269 GATD1Q8NB37 220 aa3.67□□□□□ -1.82
MSH5-219ENST00000497269 CHCHD10Q8WYQ3 142 aaPredicted RBP3.67□□□□□ -1.82
MSH5-219ENST00000497269 NIT2Q9NQR4 276 aa3.67□□□□□ -1.82
MSH5-219ENST00000497269 TRAV8-4A0A0B4J246 113 aa3.66□□□□□ -1.82
MSH5-219ENST00000497269 KANTRA0A1W2PQU2 76 aa3.66□□□□□ -1.82
MSH5-219ENST00000497269 C19orf71A6NCJ1 209 aa3.66□□□□□ -1.82
MSH5-219ENST00000497269 TEX46H3BTG2 121 aa3.66□□□□□ -1.82
MSH5-219ENST00000497269 H7C1H1 209 aa3.66□□□□□ -1.82
MSH5-219ENST00000497269 P01737 135 aa3.66□□□□□ -1.82
MSH5-219ENST00000497269 CXCL1P09341 107 aa3.66□□□□□ -1.82
MSH5-219ENST00000497269 XCL1P47992 114 aa3.66□□□□□ -1.82
MSH5-219ENST00000497269 GNG4P50150 75 aa3.66□□□□□ -1.82
MSH5-219ENST00000497269 PKIAP61925 76 aa3.66□□□□□ -1.82
MSH5-219ENST00000497269 CIRBPQ14011 172 aaKnown RBP3.66□□□□□ -1.82
MSH5-219ENST00000497269 C7orf33Q8WU49 177 aa3.66□□□□□ -1.82
MSH5-219ENST00000497269 PGLYRP4Q96LB8 373 aa3.66□□□□□ -1.82
MSH5-219ENST00000497269 KIR2DL4Q99706 377 aa3.66□□□□□ -1.82
MSH5-219ENST00000497269 RNASE7Q9H1E1 156 aaKnown RBP3.66□□□□□ -1.82
MSH5-219ENST00000497269 PLAC8Q9NZF1 115 aa3.66□□□□□ -1.82
MSH5-219ENST00000497269 TRBV20OR9-2A0A075B6H5 130 aa3.65□□□□□ -1.83
MSH5-219ENST00000497269 IGLV8-61A0A075B6I0 122 aa3.65□□□□□ -1.83
MSH5-219ENST00000497269 UMAD1C9J7I0 102 aa3.65□□□□□ -1.83
MSH5-219ENST00000497269 CCL25O15444 150 aa3.65□□□□□ -1.83
MSH5-219ENST00000497269 NDUFS6O75380 124 aaKnown RBP3.65□□□□□ -1.83
MSH5-219ENST00000497269 PMCHP20382 165 aa3.65□□□□□ -1.83
MSH5-219ENST00000497269 CEBPGP53567 150 aa3.65□□□□□ -1.83
MSH5-219ENST00000497269 KRTAP12-2P59991 146 aa3.65□□□□□ -1.83
MSH5-219ENST00000497269 RPS20P60866 119 aaKnown RBP3.65□□□□□ -1.83
MSH5-219ENST00000497269 CACNG7P62955 275 aa3.65□□□□□ -1.83
MSH5-219ENST00000497269 EIF5AP63241 154 aaKnown RBP3.65□□□□□ -1.83
MSH5-219ENST00000497269 PRR3P79522 188 aaKnown RBP3.65□□□□□ -1.83
MSH5-219ENST00000497269 RNASE13Q5GAN3 156 aaKnown RBP3.65□□□□□ -1.83
MSH5-219ENST00000497269 CEND1Q8N111 149 aa3.65□□□□□ -1.83
MSH5-219ENST00000497269 TCEAL7Q9BRU2 100 aa3.65□□□□□ -1.83
MSH5-219ENST00000497269 LRP2P98164 4655 aa3.64□□□□□ -1.83
MSH5-219ENST00000497269 A0A0J9YXV3 536 aa3.64□□□□□ -1.83
MSH5-219ENST00000497269 LOC105371267A0A1B0GV96 52 aa3.64□□□□□ -1.83
MSH5-219ENST00000497269 K7EN84 100 aa3.64□□□□□ -1.83
MSH5-219ENST00000497269 TRGC1P0CF51 173 aa3.64□□□□□ -1.83
MSH5-219ENST00000497269 FGF6P10767 208 aa3.64□□□□□ -1.83
MSH5-219ENST00000497269 EIF5AL1Q6IS14 154 aaKnown RBP3.64□□□□□ -1.83
MSH5-219ENST00000497269 RNF185Q96GF1 192 aa3.64□□□□□ -1.83
MSH5-219ENST00000497269 LINC01600Q96MT4 127 aa3.64□□□□□ -1.83
MSH5-219ENST00000497269 LINC00959A0A1B0GUT2 108 aa3.63□□□□□ -1.83
MSH5-219ENST00000497269 A0A1W2PNN7 141 aa3.63□□□□□ -1.83
MSH5-219ENST00000497269 XKRY2A2RUG3 117 aa3.63□□□□□ -1.83
MSH5-219ENST00000497269 FAM231BA6NCW3 169 aa3.63□□□□□ -1.83
MSH5-219ENST00000497269 F2Z2F3 143 aa3.63□□□□□ -1.83
MSH5-219ENST00000497269 SMKR1H3BMG3 65 aa3.63□□□□□ -1.83
MSH5-219ENST00000497269 APCSP02743 223 aa3.63□□□□□ -1.83
MSH5-219ENST00000497269 BCL2P10415 239 aa3.63□□□□□ -1.83
MSH5-219ENST00000497269 ERASQ7Z444 233 aa3.63□□□□□ -1.83
MSH5-219ENST00000497269 MANBALQ9NQG1 85 aa3.63□□□□□ -1.83
MSH5-219ENST00000497269 TMEM242Q9NWH2 141 aa3.63□□□□□ -1.83
MSH5-219ENST00000497269 SDHAF1A6NFY7 115 aa3.62□□□□□ -1.83
MSH5-219ENST00000497269 E9PLD3 99 aa3.62□□□□□ -1.83
MSH5-219ENST00000497269 KRTAP10-8P60410 259 aa3.62□□□□□ -1.83
MSH5-219ENST00000497269 MEF2BQ02080 365 aaPredicted RBP3.62□□□□□ -1.83
MSH5-219ENST00000497269 SVBPQ8N300 66 aa3.62□□□□□ -1.83
MSH5-219ENST00000497269 BTF3L4Q96K17 158 aa3.62□□□□□ -1.83
MSH5-219ENST00000497269 CARD19Q96LW7 228 aa3.62□□□□□ -1.83
MSH5-219ENST00000497269 RPP21Q9H633 154 aaKnown RBP3.62□□□□□ -1.83
MSH5-219ENST00000497269 IGLV4-69A0A075B6H9 119 aa3.61□□□□□ -1.83
MSH5-219ENST00000497269 GVQW2A0A096LPI5 108 aaPredicted RBP3.61□□□□□ -1.83
MSH5-219ENST00000497269 I3L3M4 83 aa3.61□□□□□ -1.83
MSH5-219ENST00000497269 GATCO43716 136 aaKnown RBP3.61□□□□□ -1.83
MSH5-219ENST00000497269 PDE6DO43924 150 aa3.61□□□□□ -1.83
MSH5-219ENST00000497269 NCR2O95944 276 aa3.61□□□□□ -1.83
MSH5-219ENST00000497269 CTRLP40313 264 aa3.61□□□□□ -1.83
MSH5-219ENST00000497269 SYCNQ0VAF6 134 aa3.61□□□□□ -1.83
MSH5-219ENST00000497269 SS18Q15532 418 aa3.61□□□□□ -1.83
MSH5-219ENST00000497269 PHF5AQ7RTV0 110 aaKnown RBP3.61□□□□□ -1.83
MSH5-219ENST00000497269 SMIM15Q7Z3B0 74 aa3.61□□□□□ -1.83
MSH5-219ENST00000497269 C5orf38Q86SI9 138 aa3.61□□□□□ -1.83
MSH5-219ENST00000497269 OR5A1Q8NGJ0 315 aa3.61□□□□□ -1.83
MSH5-219ENST00000497269 TMEM101Q96IK0 257 aa3.61□□□□□ -1.83
MSH5-219ENST00000497269 TNXBP22105 4242 aa3.61□□□□□ -1.83
MSH5-219ENST00000497269 TRAV13-1A0A0B4J241 112 aa3.6□□□□□ -1.83
MSH5-219ENST00000497269 IGHV1-58A0A0C4DH39 117 aa3.6□□□□□ -1.83
MSH5-219ENST00000497269 RPL32P62910 135 aaKnown RBP3.6□□□□□ -1.83
MSH5-219ENST00000497269 S100A12P80511 92 aa3.6□□□□□ -1.83
MSH5-219ENST00000497269 RPL18AQ02543 176 aaKnown RBP3.6□□□□□ -1.83
MSH5-219ENST00000497269 FAM74A3Q4VXF1 159 aa3.6□□□□□ -1.83
MSH5-219ENST00000497269 SPINK6Q6UWN8 80 aa3.6□□□□□ -1.83
MSH5-219ENST00000497269 ST20Q9HBF5 79 aa3.6□□□□□ -1.83
MSH5-219ENST00000497269 CARHSP1Q9Y2V2 147 aaKnown RBP3.6□□□□□ -1.83
MSH5-219ENST00000497269 LPAP08519 4548 aa3.6□□□□□ -1.83
MSH5-219ENST00000497269 TRAV1-1A0A0B4J248 108 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms