RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 CYB5AP00167 134 aa1.3□□□□□ -2.2
CLK1-214ENST00000496205 EFNA4P52798 201 aa1.3□□□□□ -2.2
CLK1-214ENST00000496205 UBE2D3P61077 147 aa1.3□□□□□ -2.2
CLK1-214ENST00000496205 UBE2D2P62837 147 aa1.3□□□□□ -2.2
CLK1-214ENST00000496205 SEC11AP67812 179 aa1.3□□□□□ -2.2
CLK1-214ENST00000496205 SPINK13Q1W4C9 94 aa1.3□□□□□ -2.2
CLK1-214ENST00000496205 TSLPQ969D9 159 aa1.3□□□□□ -2.2
CLK1-214ENST00000496205 TRGV9Q99603 122 aa1.3□□□□□ -2.2
CLK1-214ENST00000496205 PRO1854Q9UHT4 67 aa1.3□□□□□ -2.2
CLK1-214ENST00000496205 PCNTO95613 3336 aa1.3□□□□□ -2.2
CLK1-214ENST00000496205 MAP2P11137 1827 aaKnown RBP1.3□□□□□ -2.2
CLK1-214ENST00000496205 MYH4Q9Y623 1939 aa1.3□□□□□ -2.2
CLK1-214ENST00000496205 CLTCL1P53675 1640 aa1.29□□□□□ -2.2
CLK1-214ENST00000496205 ALKQ9UM73 1620 aa1.29□□□□□ -2.2
CLK1-214ENST00000496205 MYOM1P52179 1685 aa1.29□□□□□ -2.2
CLK1-214ENST00000496205 RGPD8O14715 1765 aaPredicted RBP1.29□□□□□ -2.2
CLK1-214ENST00000496205 SIPA1L3O60292 1781 aaPredicted RBP1.29□□□□□ -2.2
CLK1-214ENST00000496205 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.29□□□□□ -2.2
CLK1-214ENST00000496205 A0A087WTM6 91 aa1.29□□□□□ -2.2
CLK1-214ENST00000496205 TRBV7-7A0A0K0K1E9 115 aa1.29□□□□□ -2.2
CLK1-214ENST00000496205 PDCD5O14737 125 aa1.29□□□□□ -2.2
CLK1-214ENST00000496205 SFT2D2O95562 160 aa1.29□□□□□ -2.2
CLK1-214ENST00000496205 SPAG11BQ08648 103 aa1.29□□□□□ -2.2
CLK1-214ENST00000496205 SPAG11AQ6PDA7 123 aa1.29□□□□□ -2.2
CLK1-214ENST00000496205 FAM213BQ8TBF2 198 aa1.29□□□□□ -2.2
CLK1-214ENST00000496205 C20orf78Q9BR46 151 aa1.29□□□□□ -2.2
CLK1-214ENST00000496205 NDUFA4L2Q9NRX3 87 aa1.29□□□□□ -2.2
CLK1-214ENST00000496205 V9GYH0 126 aa1.29□□□□□ -2.2
CLK1-214ENST00000496205 NLRP1Q9C000 1473 aa1.29□□□□□ -2.2
CLK1-214ENST00000496205 CPS1P31327 1500 aa1.29□□□□□ -2.2
CLK1-214ENST00000496205 NEXMIFQ5QGS0 1516 aa1.29□□□□□ -2.2
CLK1-214ENST00000496205 CICQ96RK0 1608 aaPredicted RBP1.29□□□□□ -2.2
CLK1-214ENST00000496205 A0A1W2PPM0 123 aa1.28□□□□□ -2.2
CLK1-214ENST00000496205 IGLC7A0M8Q6 106 aa1.28□□□□□ -2.2
CLK1-214ENST00000496205 TRAPPC2P0DI81 140 aa1.28□□□□□ -2.2
CLK1-214ENST00000496205 TRAPPC2BP0DI82 140 aa1.28□□□□□ -2.2
CLK1-214ENST00000496205 FAUP35544 74 aaKnown RBP1.28□□□□□ -2.2
CLK1-214ENST00000496205 CCL18P55774 89 aa1.28□□□□□ -2.2
CLK1-214ENST00000496205 Q5VV11 94 aa1.28□□□□□ -2.2
CLK1-214ENST00000496205 SERP2Q8N6R1 65 aa1.28□□□□□ -2.2
CLK1-214ENST00000496205 WFDC6Q9BQY6 131 aa1.28□□□□□ -2.2
CLK1-214ENST00000496205 MANBALQ9NQG1 85 aa1.28□□□□□ -2.2
CLK1-214ENST00000496205 CDC42SE2Q9NRR3 84 aa1.28□□□□□ -2.2
CLK1-214ENST00000496205 ANKRD50Q9ULJ7 1429 aa1.28□□□□□ -2.2
CLK1-214ENST00000496205 ABCC6O95255 1503 aa1.28□□□□□ -2.2
CLK1-214ENST00000496205 CEP170BQ9Y4F5 1589 aaPredicted RBP1.28□□□□□ -2.2
CLK1-214ENST00000496205 NHSL1Q5SYE7 1610 aa1.28□□□□□ -2.2
CLK1-214ENST00000496205 ZNF831Q5JPB2 1677 aa1.28□□□□□ -2.2
CLK1-214ENST00000496205 ALS2Q96Q42 1657 aa1.28□□□□□ -2.2
CLK1-214ENST00000496205 FMN2Q9NZ56 1722 aa1.27□□□□□ -2.21
CLK1-214ENST00000496205 FAM208AQ9UK61 1670 aaKnown RBP1.27□□□□□ -2.21
CLK1-214ENST00000496205 CDC42BPGQ6DT37 1551 aa1.27□□□□□ -2.21
CLK1-214ENST00000496205 TRAV22A0A0B4J277 110 aa1.27□□□□□ -2.21
CLK1-214ENST00000496205 CHKB-CPT1BH3BT56 60 aa1.27□□□□□ -2.21
CLK1-214ENST00000496205 HMGN4O00479 90 aa1.27□□□□□ -2.21
CLK1-214ENST00000496205 ANGP03950 147 aaKnown RBP1.27□□□□□ -2.21
CLK1-214ENST00000496205 FXYD6P3P58550 94 aa1.27□□□□□ -2.21
CLK1-214ENST00000496205 GNGT1P63211 74 aa1.27□□□□□ -2.21
CLK1-214ENST00000496205 TMEM170BQ5T4T1 132 aa1.27□□□□□ -2.21
CLK1-214ENST00000496205 BAGE3Q86Y29 109 aa1.27□□□□□ -2.21
CLK1-214ENST00000496205 Q8N6K4 173 aa1.27□□□□□ -2.21
CLK1-214ENST00000496205 S100A16Q96FQ6 103 aaKnown RBP1.27□□□□□ -2.21
CLK1-214ENST00000496205 S100A13Q99584 98 aa1.27□□□□□ -2.21
CLK1-214ENST00000496205 SMCO4Q9NRQ5 59 aa1.27□□□□□ -2.21
CLK1-214ENST00000496205 CACFD1Q9UGQ2 172 aa1.27□□□□□ -2.21
CLK1-214ENST00000496205 ARFGEF1Q9Y6D6 1849 aa1.26□□□□□ -2.21
CLK1-214ENST00000496205 LOC285556D6RIA3 1793 aa1.26□□□□□ -2.21
CLK1-214ENST00000496205 RGPD1P0DJD0 1748 aa1.26□□□□□ -2.21
CLK1-214ENST00000496205 QSER1Q2KHR3 1735 aa1.26□□□□□ -2.21
CLK1-214ENST00000496205 KIF1AQ12756 1690 aa1.26□□□□□ -2.21
CLK1-214ENST00000496205 SHPRHQ149N8 1683 aa1.26□□□□□ -2.21
CLK1-214ENST00000496205 LMO7Q8WWI1 1683 aa1.26□□□□□ -2.21
CLK1-214ENST00000496205 ASXL1Q8IXJ9 1541 aa1.26□□□□□ -2.21
CLK1-214ENST00000496205 MRC1P22897 1456 aa1.26□□□□□ -2.21
CLK1-214ENST00000496205 NKTRP30414 1462 aaKnown RBP1.26□□□□□ -2.21
CLK1-214ENST00000496205 RALGAPBQ86X10 1494 aa1.26□□□□□ -2.21
CLK1-214ENST00000496205 CACNA1BQ00975 2339 aa1.26□□□□□ -2.21
CLK1-214ENST00000496205 MED13Q9UHV7 2174 aa1.26□□□□□ -2.21
CLK1-214ENST00000496205 A0A096LNT2 108 aa1.26□□□□□ -2.21
CLK1-214ENST00000496205 TMEM14DPA8MWL7 114 aa1.26□□□□□ -2.21
CLK1-214ENST00000496205 SPCS1Q9Y6A9 102 aa1.26□□□□□ -2.21
CLK1-214ENST00000496205 RGPD5Q99666 1765 aa1.26□□□□□ -2.21
CLK1-214ENST00000496205 PLCH1Q4KWH8 1693 aa1.26□□□□□ -2.21
CLK1-214ENST00000496205 ESPL1Q14674 2120 aa1.25□□□□□ -2.21
CLK1-214ENST00000496205 ARL14EPLP0DKL9 152 aa1.25□□□□□ -2.21
CLK1-214ENST00000496205 VMO1Q7Z5L0 202 aa1.25□□□□□ -2.21
CLK1-214ENST00000496205 S100ZQ8WXG8 99 aa1.25□□□□□ -2.21
CLK1-214ENST00000496205 RABAC1Q9UI14 185 aa1.25□□□□□ -2.21
CLK1-214ENST00000496205 ABCA4P78363 2273 aa1.25□□□□□ -2.21
CLK1-214ENST00000496205 CENPFP49454 3210 aa1.25□□□□□ -2.21
CLK1-214ENST00000496205 PARP4Q9UKK3 1724 aaKnown RBP1.25□□□□□ -2.21
CLK1-214ENST00000496205 CEP350Q5VT06 3117 aa1.24□□□□□ -2.21
CLK1-214ENST00000496205 BRCA2P51587 3418 aa1.24□□□□□ -2.21
CLK1-214ENST00000496205 SCN11AQ9UI33 1791 aa1.24□□□□□ -2.21
CLK1-214ENST00000496205 PKD1L3Q7Z443 1732 aa1.24□□□□□ -2.21
CLK1-214ENST00000496205 F8VRH5 84 aa1.24□□□□□ -2.21
CLK1-214ENST00000496205 SYS1-DBNDD2H3BUS1 97 aa1.24□□□□□ -2.21
CLK1-214ENST00000496205 UQCR11O14957 56 aa1.24□□□□□ -2.21
CLK1-214ENST00000496205 BCE1O60756 84 aa1.24□□□□□ -2.21
CLK1-214ENST00000496205 CFDP00746 253 aaPredicted RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms