RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 Q8N3U1 123 aa11.24□□□□□ -0.61
HLA-A-208ENST00000496081 LINC00959A0A1B0GUT2 108 aa11.23□□□□□ -0.61
HLA-A-208ENST00000496081 B9D2Q9BPU9 175 aa11.23□□□□□ -0.61
HLA-A-208ENST00000496081 TRAV10A0A0B4J240 114 aa11.22□□□□□ -0.61
HLA-A-208ENST00000496081 SCGB1D4Q6XE38 83 aa11.21□□□□□ -0.61
HLA-A-208ENST00000496081 IGLV5-39A0A0G2JS06 123 aa11.21□□□□□ -0.62
HLA-A-208ENST00000496081 SMIM1B2RUZ4 78 aa11.21□□□□□ -0.62
HLA-A-208ENST00000496081 LINC00269Q8N2A0 174 aa11.21□□□□□ -0.62
HLA-A-208ENST00000496081 MEGF8Q7Z7M0 2845 aa11.2□□□□□ -0.62
HLA-A-208ENST00000496081 COL7A1Q02388 2944 aa11.2□□□□□ -0.62
HLA-A-208ENST00000496081 ANGP03950 147 aaKnown RBP11.2□□□□□ -0.62
HLA-A-208ENST00000496081 CLPSL2Q6UWE3 100 aa11.2□□□□□ -0.62
HLA-A-208ENST00000496081 IGHV3OR16-9A0A0B4J2B5 98 aa11.19□□□□□ -0.62
HLA-A-208ENST00000496081 ESRGQ1W209 222 aa11.19□□□□□ -0.62
HLA-A-208ENST00000496081 TAL2Q16559 108 aa11.18□□□□□ -0.62
HLA-A-208ENST00000496081 ORAOV1Q8WV07 137 aa11.18□□□□□ -0.62
HLA-A-208ENST00000496081 DNAH9Q9NYC9 4486 aa11.18□□□□□ -0.62
HLA-A-208ENST00000496081 SS18Q15532 418 aa11.18□□□□□ -0.62
HLA-A-208ENST00000496081 ZFAND6Q6FIF0 208 aa11.18□□□□□ -0.62
HLA-A-208ENST00000496081 C10orf126Q8N4M7 172 aa11.18□□□□□ -0.62
HLA-A-208ENST00000496081 HIST1H4GQ99525 98 aa11.18□□□□□ -0.62
HLA-A-208ENST00000496081 CCL25O15444 150 aa11.17□□□□□ -0.62
HLA-A-208ENST00000496081 GCSHP23434 173 aa11.17□□□□□ -0.62
HLA-A-208ENST00000496081 REG3AQ06141 175 aa11.17□□□□□ -0.62
HLA-A-208ENST00000496081 CEND1Q8N111 149 aa11.17□□□□□ -0.62
HLA-A-208ENST00000496081 NDUFA12Q9UI09 145 aa11.17□□□□□ -0.62
HLA-A-208ENST00000496081 WFDC10BQ8IUB3 73 aa11.16□□□□□ -0.62
HLA-A-208ENST00000496081 TM2D2Q9BX73 214 aa11.16□□□□□ -0.62
HLA-A-208ENST00000496081 STAB2Q8WWQ8 2551 aa11.16□□□□□ -0.62
HLA-A-208ENST00000496081 XCL1P47992 114 aa11.16□□□□□ -0.62
HLA-A-208ENST00000496081 FXYD2P54710 66 aa11.16□□□□□ -0.62
HLA-A-208ENST00000496081 FBN3Q75N90 2809 aa11.15□□□□□ -0.62
HLA-A-208ENST00000496081 A0A087WZ39 114 aa11.15□□□□□ -0.62
HLA-A-208ENST00000496081 A0A0J9YXY3 114 aa11.15□□□□□ -0.62
HLA-A-208ENST00000496081 K7EP13 123 aa11.15□□□□□ -0.62
HLA-A-208ENST00000496081 C15orf53Q8NAA6 179 aa11.15□□□□□ -0.62
HLA-A-208ENST00000496081 C5orf38Q86SI9 138 aa11.14□□□□□ -0.63
HLA-A-208ENST00000496081 SPANXB1Q9NS25 103 aaPredicted RBP11.14□□□□□ -0.63
HLA-A-208ENST00000496081 KLK12Q9UKR0 248 aa11.14□□□□□ -0.63
HLA-A-208ENST00000496081 IGHV3-30P01768 117 aa11.13□□□□□ -0.63
HLA-A-208ENST00000496081 IGHV3-33P01772 117 aa11.13□□□□□ -0.63
HLA-A-208ENST00000496081 IGHV3-30-5P0DP03 117 aa11.13□□□□□ -0.63
HLA-A-208ENST00000496081 SRSF9Q13242 221 aaKnown RBP eCLIP11.13□□□□□ -0.63
HLA-A-208ENST00000496081 PRR34Q9NV39 138 aa11.13□□□□□ -0.63
HLA-A-208ENST00000496081 PRKDCP78527 4128 aaKnown RBP11.13□□□□□ -0.63
HLA-A-208ENST00000496081 NDUFA1O15239 70 aa11.13□□□□□ -0.63
HLA-A-208ENST00000496081 CHCHD10Q8WYQ3 142 aaPredicted RBP11.13□□□□□ -0.63
HLA-A-208ENST00000496081 IGLV10-54A0A075B6I4 117 aa11.12□□□□□ -0.63
HLA-A-208ENST00000496081 A6NDN8 102 aa11.11□□□□□ -0.63
HLA-A-208ENST00000496081 NHLRC4P0CG21 123 aaPredicted RBP11.11□□□□□ -0.63
HLA-A-208ENST00000496081 PTTG1IPP53801 180 aa11.11□□□□□ -0.63
HLA-A-208ENST00000496081 CD164L2Q6UWJ8 174 aa11.11□□□□□ -0.63
HLA-A-208ENST00000496081 ENHOQ6UWT2 76 aa11.11□□□□□ -0.63
HLA-A-208ENST00000496081 IGLL5B9A064 214 aa11.11□□□□□ -0.63
HLA-A-208ENST00000496081 Q6ZVH6 145 aa11.11□□□□□ -0.63
HLA-A-208ENST00000496081 LITAFQ99732 161 aa11.11□□□□□ -0.63
HLA-A-208ENST00000496081 Q9H8V8 135 aa11.11□□□□□ -0.63
HLA-A-208ENST00000496081 TAX1BP3O14907 124 aa11.1□□□□□ -0.63
HLA-A-208ENST00000496081 COX7B2Q8TF08 81 aa11.1□□□□□ -0.63
HLA-A-208ENST00000496081 ZNF625Q96I27 306 aaPredicted RBP11.1□□□□□ -0.63
HLA-A-208ENST00000496081 TMEM238C9JI98 176 aa11.09□□□□□ -0.63
HLA-A-208ENST00000496081 LINC01561Q8N1V8 128 aa11.08□□□□□ -0.64
HLA-A-208ENST00000496081 TOMM7Q9P0U1 55 aa11.08□□□□□ -0.64
HLA-A-208ENST00000496081 ADAMTSL4-AS1Q5T5F5 129 aa11.08□□□□□ -0.64
HLA-A-208ENST00000496081 COX7A2LO14548 114 aa11.07□□□□□ -0.64
HLA-A-208ENST00000496081 FOXI1Q12951 378 aa11.07□□□□□ -0.64
HLA-A-208ENST00000496081 LINC01556Q5JQF7 62 aa11.07□□□□□ -0.64
HLA-A-208ENST00000496081 UBE2WQ96B02 151 aa11.07□□□□□ -0.64
HLA-A-208ENST00000496081 NHP2Q9NX24 153 aaKnown RBP11.07□□□□□ -0.64
HLA-A-208ENST00000496081 LINC00588Q9Y4M8 146 aa11.07□□□□□ -0.64
HLA-A-208ENST00000496081 TIMM17BO60830 172 aa11.06□□□□□ -0.64
HLA-A-208ENST00000496081 CRPP02741 224 aa11.06□□□□□ -0.64
HLA-A-208ENST00000496081 COX11Q9Y6N1 276 aa11.06□□□□□ -0.64
HLA-A-208ENST00000496081 SMIM13P0DJ93 91 aa11.05□□□□□ -0.64
HLA-A-208ENST00000496081 GAGE12HA6NDE8 117 aa11.05□□□□□ -0.64
HLA-A-208ENST00000496081 K7ERJ3 54 aa11.05□□□□□ -0.64
HLA-A-208ENST00000496081 HERV-K104P63124 156 aa11.05□□□□□ -0.64
HLA-A-208ENST00000496081 SPANXDQ9BXN6 97 aa11.05□□□□□ -0.64
HLA-A-208ENST00000496081 SPANXCQ9NY87 97 aa11.05□□□□□ -0.64
HLA-A-208ENST00000496081 TRAV8-4A0A0B4J246 113 aa11.04□□□□□ -0.64
HLA-A-208ENST00000496081 DNAH10OSP0CZ25 163 aa11.04□□□□□ -0.64
HLA-A-208ENST00000496081 CCL18P55774 89 aa11.04□□□□□ -0.64
HLA-A-208ENST00000496081 MUSTN1Q8IVN3 82 aa11.04□□□□□ -0.64
HLA-A-208ENST00000496081 MIAQ16674 131 aa11.03□□□□□ -0.64
HLA-A-208ENST00000496081 RAB37Q96AX2 223 aa11.03□□□□□ -0.64
HLA-A-208ENST00000496081 TMEM238LA0A1B0GVL6 79 aa11.03□□□□□ -0.64
HLA-A-208ENST00000496081 A0A1B0GWB2 263 aa11.03□□□□□ -0.64
HLA-A-208ENST00000496081 A6NJY4 79 aa11.03□□□□□ -0.64
HLA-A-208ENST00000496081 MALP21145 153 aa11.03□□□□□ -0.64
HLA-A-208ENST00000496081 CIRBPQ14011 172 aaKnown RBP11.03□□□□□ -0.64
HLA-A-208ENST00000496081 Q8IZM0 81 aa11.03□□□□□ -0.64
HLA-A-208ENST00000496081 PRSS2P07478 247 aa11.02□□□□□ -0.65
HLA-A-208ENST00000496081 C6orf226Q5I0X4 101 aa11.02□□□□□ -0.65
HLA-A-208ENST00000496081 MEIG1Q5JSS6 88 aa11.01□□□□□ -0.65
HLA-A-208ENST00000496081 DAND5Q8N907 189 aa11.01□□□□□ -0.65
HLA-A-208ENST00000496081 A0A0U1RRA0 63 aa11□□□□□ -0.65
HLA-A-208ENST00000496081 KIAA0087Q14695 138 aa11□□□□□ -0.65
HLA-A-208ENST00000496081 A4D1N5 150 aa11□□□□□ -0.65
HLA-A-208ENST00000496081 C9orf118A6NHY6 69 aa11□□□□□ -0.65
HLA-A-208ENST00000496081 RPL24P83731 157 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 613.8 ms