RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 NIT2Q9NQR4 276 aa4.25□□□□□ -1.73
VIM-207ENST00000495528 DHRS4-AS1Q9P1J3 65 aa4.25□□□□□ -1.73
VIM-207ENST00000495528 DNAH8Q96JB1 4490 aa4.25□□□□□ -1.73
VIM-207ENST00000495528 TRBV6-4A0A1B0GX49 114 aa4.24□□□□□ -1.73
VIM-207ENST00000495528 H7C1H1 209 aa4.24□□□□□ -1.73
VIM-207ENST00000495528 NPYP01303 97 aa4.24□□□□□ -1.73
VIM-207ENST00000495528 HERV-K104P63124 156 aa4.24□□□□□ -1.73
VIM-207ENST00000495528 OR10J3Q5JRS4 329 aa4.24□□□□□ -1.73
VIM-207ENST00000495528 ORMDL3Q8N138 153 aa4.24□□□□□ -1.73
VIM-207ENST00000495528 ST20Q9HBF5 79 aa4.24□□□□□ -1.73
VIM-207ENST00000495528 PPBPP02775 128 aa4.23□□□□□ -1.73
VIM-207ENST00000495528 PMCHP20382 165 aa4.23□□□□□ -1.73
VIM-207ENST00000495528 SRIP30626 198 aa4.23□□□□□ -1.73
VIM-207ENST00000495528 RHOHQ15669 191 aa4.23□□□□□ -1.73
VIM-207ENST00000495528 DNAJC30Q96LL9 226 aa4.23□□□□□ -1.73
VIM-207ENST00000495528 ICOSQ9Y6W8 199 aa4.23□□□□□ -1.73
VIM-207ENST00000495528 UBR4Q5T4S7 5183 aa4.22□□□□□ -1.73
VIM-207ENST00000495528 TRBV7-3A0A075B6L6 115 aa4.22□□□□□ -1.73
VIM-207ENST00000495528 TRAV9-2A0A087WT02 112 aa4.22□□□□□ -1.73
VIM-207ENST00000495528 TRBV10-1A0A0K0K1A3 114 aa4.22□□□□□ -1.73
VIM-207ENST00000495528 C1orf196B1AJZ1 125 aa4.22□□□□□ -1.73
VIM-207ENST00000495528 PPP1R17O96001 155 aa4.22□□□□□ -1.73
VIM-207ENST00000495528 POLR2KP53803 58 aaKnown RBP4.22□□□□□ -1.73
VIM-207ENST00000495528 MRPL23Q16540 153 aaKnown RBP4.22□□□□□ -1.73
VIM-207ENST00000495528 IQCJQ1A5X6 159 aa4.22□□□□□ -1.73
VIM-207ENST00000495528 NEGR1Q7Z3B1 354 aa4.22□□□□□ -1.73
VIM-207ENST00000495528 NIT1Q86X76 327 aa4.22□□□□□ -1.73
VIM-207ENST00000495528 WFDC10BQ8IUB3 73 aa4.22□□□□□ -1.73
VIM-207ENST00000495528 ATP6V0E2Q8NHE4 81 aa4.22□□□□□ -1.73
VIM-207ENST00000495528 TRBV6-5A0A0K0K1A5 114 aa4.21□□□□□ -1.74
VIM-207ENST00000495528 SDHAF1A6NFY7 115 aa4.21□□□□□ -1.74
VIM-207ENST00000495528 IFI27P40305 119 aaPredicted RBP4.21□□□□□ -1.74
VIM-207ENST00000495528 UBE2D3P61077 147 aa4.21□□□□□ -1.74
VIM-207ENST00000495528 UBE2D2P62837 147 aa4.21□□□□□ -1.74
VIM-207ENST00000495528 BAGE3Q86Y29 109 aa4.21□□□□□ -1.74
VIM-207ENST00000495528 LINC00518Q8N0U6 118 aa4.21□□□□□ -1.74
VIM-207ENST00000495528 C20orf78Q9BR46 151 aa4.21□□□□□ -1.74
VIM-207ENST00000495528 TMEM70Q9BUB7 260 aa4.21□□□□□ -1.74
VIM-207ENST00000495528 MAP1LC3AQ9H492 121 aa4.21□□□□□ -1.74
VIM-207ENST00000495528 HMCN2Q8NDA2 5059 aa4.21□□□□□ -1.74
VIM-207ENST00000495528 SRRM2Q9UQ35 2752 aaKnown RBP4.2□□□□□ -1.74
VIM-207ENST00000495528 LRCOL1A6NCL2 159 aa4.2□□□□□ -1.74
VIM-207ENST00000495528 I3L3M4 83 aa4.2□□□□□ -1.74
VIM-207ENST00000495528 TCAPO15273 167 aa4.2□□□□□ -1.74
VIM-207ENST00000495528 LINC00614P0C842 121 aa4.2□□□□□ -1.74
VIM-207ENST00000495528 NDUFA6P56556 154 aa4.2□□□□□ -1.74
VIM-207ENST00000495528 Q8N8P6 123 aa4.2□□□□□ -1.74
VIM-207ENST00000495528 C18orf32Q8TCD1 76 aa4.2□□□□□ -1.74
VIM-207ENST00000495528 LAMTOR2Q9Y2Q5 125 aa4.2□□□□□ -1.74
VIM-207ENST00000495528 TRBV27A0A0K0K1C4 114 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 K7EP13 123 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 HIST1H2BKO60814 126 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 HIST1H2BJP06899 126 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 HIST1H2BOP23527 126 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 FCER1GP30273 86 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 HIST1H2BBP33778 126 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 HIST1H2BDP58876 126 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 RAB5BP61020 215 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 HIST1H2BCP62807 126 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 Q0VG73 95 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 COTL1Q14019 142 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 HIST2H2BEQ16778 126 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.19□□□□□ -1.74
VIM-207ENST00000495528 NTM-AS1Q6ZSK4 140 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 FA2HQ7L5A8 372 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 SH2D6Q7Z4S9 175 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 DAZ4Q86SG3 579 aaKnown RBP4.19□□□□□ -1.74
VIM-207ENST00000495528 HIST1H2BHQ93079 126 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 HIST1H2BNQ99877 126 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 HIST1H2BMQ99879 126 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 SMIM2Q9BVW6 85 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 GTSF1LQ9H1H1 148 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 Q9HAA7 133 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 NXT2Q9NPJ8 142 aaKnown RBP4.19□□□□□ -1.74
VIM-207ENST00000495528 DAZ3Q9NR90 486 aaKnown RBP4.19□□□□□ -1.74
VIM-207ENST00000495528 PRR34Q9NV39 138 aa4.19□□□□□ -1.74
VIM-207ENST00000495528 TMEM262E9PQX1 116 aa4.18□□□□□ -1.74
VIM-207ENST00000495528 PSCAO43653 123 aa4.18□□□□□ -1.74
VIM-207ENST00000495528 NUPR1O60356 82 aa4.18□□□□□ -1.74
VIM-207ENST00000495528 RPL32P62910 135 aaKnown RBP4.18□□□□□ -1.74
VIM-207ENST00000495528 LAGE3Q14657 143 aa4.18□□□□□ -1.74
VIM-207ENST00000495528 Q1RN00 199 aa4.18□□□□□ -1.74
VIM-207ENST00000495528 RNASEKQ6P5S7 137 aaKnown RBP4.18□□□□□ -1.74
VIM-207ENST00000495528 Q8N814 137 aa4.18□□□□□ -1.74
VIM-207ENST00000495528 KIR2DL4Q99706 377 aa4.18□□□□□ -1.74
VIM-207ENST00000495528 LRP1Q07954 4544 aaKnown RBP4.17□□□□□ -1.74
VIM-207ENST00000495528 TRBV6-8A0A0A6YYG3 113 aa4.17□□□□□ -1.74
VIM-207ENST00000495528 IGHV1-24A0A0C4DH33 117 aa4.17□□□□□ -1.74
VIM-207ENST00000495528 IBA57-AS1B1ANH7 110 aa4.17□□□□□ -1.74
VIM-207ENST00000495528 SERF1AO75920 110 aa4.17□□□□□ -1.74
VIM-207ENST00000495528 LINC00694P0DN24 101 aa4.17□□□□□ -1.74
VIM-207ENST00000495528 PMCHL1Q16048 86 aa4.17□□□□□ -1.74
VIM-207ENST00000495528 TMEM97Q5BJF2 176 aa4.17□□□□□ -1.74
VIM-207ENST00000495528 FAM19A2Q8N3H0 131 aa4.17□□□□□ -1.74
VIM-207ENST00000495528 C10orf126Q8N4M7 172 aa4.17□□□□□ -1.74
VIM-207ENST00000495528 TRBV25-1A0A075B6N4 114 aa4.16□□□□□ -1.74
VIM-207ENST00000495528 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.16□□□□□ -1.74
VIM-207ENST00000495528 TRAV8-6A0A0B4J262 113 aa4.16□□□□□ -1.74
VIM-207ENST00000495528 IGKV2-29A2NJV5 120 aaPredicted RBP4.16□□□□□ -1.74
VIM-207ENST00000495528 UBE2L6O14933 153 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms