RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 HERVK_113P63121 156 aa7.38□□□□□ -1.23
PRPF4B-209ENST00000494674 RAB37Q96AX2 223 aa7.38□□□□□ -1.23
PRPF4B-209ENST00000494674 TMEM101Q96IK0 257 aa7.38□□□□□ -1.23
PRPF4B-209ENST00000494674 NAA38Q9BRA0 125 aaKnown RBP7.38□□□□□ -1.23
PRPF4B-209ENST00000494674 A0A0J9YXY3 114 aa7.37□□□□□ -1.23
PRPF4B-209ENST00000494674 UBE2V1Q13404 147 aa7.37□□□□□ -1.23
PRPF4B-209ENST00000494674 C12orf74Q32Q52 190 aa7.37□□□□□ -1.23
PRPF4B-209ENST00000494674 ZFAND6Q6FIF0 208 aa7.37□□□□□ -1.23
PRPF4B-209ENST00000494674 LITAFQ99732 161 aa7.37□□□□□ -1.23
PRPF4B-209ENST00000494674 CHCHD5Q9BSY4 110 aa7.37□□□□□ -1.23
PRPF4B-209ENST00000494674 SMIM1B2RUZ4 78 aa7.36□□□□□ -1.23
PRPF4B-209ENST00000494674 H3BUT2 72 aa7.36□□□□□ -1.23
PRPF4B-209ENST00000494674 VAMP3Q15836 100 aa7.36□□□□□ -1.23
PRPF4B-209ENST00000494674 SAMD5Q5TGI4 173 aa7.36□□□□□ -1.23
PRPF4B-209ENST00000494674 TRAV26-1A0A087WT03 109 aa7.35□□□□□ -1.23
PRPF4B-209ENST00000494674 A0A096LPF7 62 aa7.35□□□□□ -1.23
PRPF4B-209ENST00000494674 SRSF9Q13242 221 aaKnown RBP eCLIP7.35□□□□□ -1.23
PRPF4B-209ENST00000494674 NDUFA12Q9UI09 145 aa7.35□□□□□ -1.23
PRPF4B-209ENST00000494674 A0A1B0GUV1 79 aa7.34□□□□□ -1.23
PRPF4B-209ENST00000494674 A0A1W2PPM0 123 aa7.34□□□□□ -1.23
PRPF4B-209ENST00000494674 NDUFA1O15239 70 aa7.34□□□□□ -1.23
PRPF4B-209ENST00000494674 HUWE1Q7Z6Z7 4374 aaKnown RBP7.33□□□□□ -1.24
PRPF4B-209ENST00000494674 IGLL5B9A064 214 aa7.33□□□□□ -1.24
PRPF4B-209ENST00000494674 RBX1P62877 108 aa7.33□□□□□ -1.24
PRPF4B-209ENST00000494674 TEX48A0A1B0GUV7 120 aa7.32□□□□□ -1.24
PRPF4B-209ENST00000494674 TMEM238C9JI98 176 aa7.32□□□□□ -1.24
PRPF4B-209ENST00000494674 EIF4EBP3O60516 100 aaPredicted RBP7.32□□□□□ -1.24
PRPF4B-209ENST00000494674 ADAMTSL4-AS1Q5T5F5 129 aa7.32□□□□□ -1.24
PRPF4B-209ENST00000494674 LCE3BQ5TA77 95 aa7.32□□□□□ -1.24
PRPF4B-209ENST00000494674 C11orf68Q9H3H3 251 aaKnown RBP7.32□□□□□ -1.24
PRPF4B-209ENST00000494674 IGHV3OR16-9A0A0B4J2B5 98 aa7.32□□□□□ -1.24
PRPF4B-209ENST00000494674 TMEM238LA0A1B0GVL6 79 aa7.32□□□□□ -1.24
PRPF4B-209ENST00000494674 A6NJY4 79 aa7.32□□□□□ -1.24
PRPF4B-209ENST00000494674 HTN3P15516 51 aa7.32□□□□□ -1.24
PRPF4B-209ENST00000494674 LINC00959A0A1B0GUT2 108 aa7.31□□□□□ -1.24
PRPF4B-209ENST00000494674 K7EP34 96 aa7.31□□□□□ -1.24
PRPF4B-209ENST00000494674 Q8N3U1 123 aa7.31□□□□□ -1.24
PRPF4B-209ENST00000494674 ZNF625Q96I27 306 aaPredicted RBP7.31□□□□□ -1.24
PRPF4B-209ENST00000494674 SPANXDQ9BXN6 97 aa7.31□□□□□ -1.24
PRPF4B-209ENST00000494674 SPANXCQ9NY87 97 aa7.31□□□□□ -1.24
PRPF4B-209ENST00000494674 MGAM2Q2M2H8 2515 aa7.31□□□□□ -1.24
PRPF4B-209ENST00000494674 IGKV3OR2-268A0A0C4DH90 116 aa7.3□□□□□ -1.24
PRPF4B-209ENST00000494674 TIMM17BO60830 172 aa7.3□□□□□ -1.24
PRPF4B-209ENST00000494674 CFC1BP0CG36 223 aa7.3□□□□□ -1.24
PRPF4B-209ENST00000494674 CFC1P0CG37 223 aa7.3□□□□□ -1.24
PRPF4B-209ENST00000494674 MRPL23Q16540 153 aaKnown RBP7.3□□□□□ -1.24
PRPF4B-209ENST00000494674 MUSTN1Q8IVN3 82 aa7.3□□□□□ -1.24
PRPF4B-209ENST00000494674 A4D1N5 150 aa7.3□□□□□ -1.24
PRPF4B-209ENST00000494674 MIAQ16674 131 aa7.3□□□□□ -1.24
PRPF4B-209ENST00000494674 Q9H8V8 135 aa7.3□□□□□ -1.24
PRPF4B-209ENST00000494674 ICOSQ9Y6W8 199 aa7.3□□□□□ -1.24
PRPF4B-209ENST00000494674 A0A087WZ39 114 aa7.29□□□□□ -1.24
PRPF4B-209ENST00000494674 TMEM262E9PQX1 116 aa7.29□□□□□ -1.24
PRPF4B-209ENST00000494674 FABP2P12104 132 aa7.29□□□□□ -1.24
PRPF4B-209ENST00000494674 SPCS1Q9Y6A9 102 aa7.29□□□□□ -1.24
PRPF4B-209ENST00000494674 KRTAP4-8A0A0G2JLE6 195 aa7.28□□□□□ -1.24
PRPF4B-209ENST00000494674 GAGE10A6NGK3 116 aa7.28□□□□□ -1.24
PRPF4B-209ENST00000494674 APOMO95445 188 aa7.28□□□□□ -1.24
PRPF4B-209ENST00000494674 TSPAN13O95857 204 aa7.28□□□□□ -1.24
PRPF4B-209ENST00000494674 LELP1Q5T871 98 aa7.28□□□□□ -1.24
PRPF4B-209ENST00000494674 Q6ZTC4 211 aa7.28□□□□□ -1.24
PRPF4B-209ENST00000494674 SH2D6Q7Z4S9 175 aa7.28□□□□□ -1.24
PRPF4B-209ENST00000494674 PGPEP1Q9NXJ5 209 aa7.28□□□□□ -1.24
PRPF4B-209ENST00000494674 A0A0J9YWU9 116 aa7.27□□□□□ -1.25
PRPF4B-209ENST00000494674 H3BNG1 76 aa7.27□□□□□ -1.25
PRPF4B-209ENST00000494674 K7EIL1 84 aa7.27□□□□□ -1.25
PRPF4B-209ENST00000494674 PRB2P02812 416 aaPredicted RBP7.27□□□□□ -1.25
PRPF4B-209ENST00000494674 RPL24P83731 157 aaKnown RBP7.27□□□□□ -1.25
PRPF4B-209ENST00000494674 CLPSL2Q6UWE3 100 aa7.27□□□□□ -1.25
PRPF4B-209ENST00000494674 A0A0B4J2C4 111 aa7.27□□□□□ -1.25
PRPF4B-209ENST00000494674 KPRPQ5T749 579 aaPredicted RBP7.27□□□□□ -1.25
PRPF4B-209ENST00000494674 GTF2H5Q6ZYL4 71 aa7.27□□□□□ -1.25
PRPF4B-209ENST00000494674 COX7B2Q8TF08 81 aa7.27□□□□□ -1.25
PRPF4B-209ENST00000494674 DNAH9Q9NYC9 4486 aa7.26□□□□□ -1.25
PRPF4B-209ENST00000494674 COL7A1Q02388 2944 aa7.26□□□□□ -1.25
PRPF4B-209ENST00000494674 LYPD5Q6UWN5 251 aa7.26□□□□□ -1.25
PRPF4B-209ENST00000494674 C5orf38Q86SI9 138 aa7.26□□□□□ -1.25
PRPF4B-209ENST00000494674 LINC00269Q8N2A0 174 aa7.26□□□□□ -1.25
PRPF4B-209ENST00000494674 DAND5Q8N907 189 aa7.26□□□□□ -1.25
PRPF4B-209ENST00000494674 XCL1P47992 114 aa7.25□□□□□ -1.25
PRPF4B-209ENST00000494674 SS18Q15532 418 aa7.25□□□□□ -1.25
PRPF4B-209ENST00000494674 TM2D3Q9BRN9 247 aa7.25□□□□□ -1.25
PRPF4B-209ENST00000494674 PRO1854Q9UHT4 67 aa7.25□□□□□ -1.25
PRPF4B-209ENST00000494674 IGHV3-33P01772 117 aa7.24□□□□□ -1.25
PRPF4B-209ENST00000494674 PRSS2P07478 247 aa7.24□□□□□ -1.25
PRPF4B-209ENST00000494674 IFITM1P13164 125 aa7.24□□□□□ -1.25
PRPF4B-209ENST00000494674 NANOS2P60321 138 aaKnown RBP7.24□□□□□ -1.25
PRPF4B-209ENST00000494674 HERV-K104P63124 156 aa7.24□□□□□ -1.25
PRPF4B-209ENST00000494674 SOSTDC1Q6X4U4 206 aa7.24□□□□□ -1.25
PRPF4B-209ENST00000494674 MDFIQ99750 246 aa7.24□□□□□ -1.25
PRPF4B-209ENST00000494674 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.24□□□□□ -1.25
PRPF4B-209ENST00000494674 ANGP03950 147 aaKnown RBP7.24□□□□□ -1.25
PRPF4B-209ENST00000494674 NPC2P61916 151 aa7.24□□□□□ -1.25
PRPF4B-209ENST00000494674 REG3AQ06141 175 aa7.24□□□□□ -1.25
PRPF4B-209ENST00000494674 LINC01561Q8N1V8 128 aa7.24□□□□□ -1.25
PRPF4B-209ENST00000494674 LINC00308Q8TCZ7 52 aa7.24□□□□□ -1.25
PRPF4B-209ENST00000494674 PRR34Q9NV39 138 aa7.23□□□□□ -1.25
PRPF4B-209ENST00000494674 CIRBPQ14011 172 aaKnown RBP7.22□□□□□ -1.25
PRPF4B-209ENST00000494674 CD164L2Q6UWJ8 174 aa7.22□□□□□ -1.25
PRPF4B-209ENST00000494674 C11orf45Q8TAV5 145 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms