RNA–Protein interactions for RNA: ENST00000494559.5

PDZRN3-211, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-211ENST00000494559 CHCHD5Q9BSY4 110 aa10.82□□□□□ -0.68
PDZRN3-211ENST00000494559 TIMM17BO60830 172 aa10.81□□□□□ -0.68
PDZRN3-211ENST00000494559 OCIAD2Q56VL3 154 aa10.81□□□□□ -0.68
PDZRN3-211ENST00000494559 PRO1854Q9UHT4 67 aa10.81□□□□□ -0.68
PDZRN3-211ENST00000494559 A0A0B4J2C4 111 aa10.81□□□□□ -0.68
PDZRN3-211ENST00000494559 KRTAP24-1Q3LI83 254 aa10.81□□□□□ -0.68
PDZRN3-211ENST00000494559 MIFP14174 115 aa10.8□□□□□ -0.68
PDZRN3-211ENST00000494559 TRRAPQ9Y4A5 3859 aa10.8□□□□□ -0.68
PDZRN3-211ENST00000494559 H3BMG7 143 aa10.8□□□□□ -0.68
PDZRN3-211ENST00000494559 MIAQ16674 131 aa10.8□□□□□ -0.68
PDZRN3-211ENST00000494559 RNF183Q96D59 192 aa10.8□□□□□ -0.68
PDZRN3-211ENST00000494559 PAX4O43316 350 aa10.79□□□□□ -0.68
PDZRN3-211ENST00000494559 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.78□□□□□ -0.68
PDZRN3-211ENST00000494559 Q9H8V8 135 aa10.78□□□□□ -0.68
PDZRN3-211ENST00000494559 CELA1Q9UNI1 258 aa10.78□□□□□ -0.68
PDZRN3-211ENST00000494559 IGHV3-33P01772 117 aa10.78□□□□□ -0.68
PDZRN3-211ENST00000494559 PRSS2P07478 247 aa10.78□□□□□ -0.68
PDZRN3-211ENST00000494559 DAD1P61803 113 aa10.77□□□□□ -0.69
PDZRN3-211ENST00000494559 ZNF625Q96I27 306 aaPredicted RBP10.77□□□□□ -0.69
PDZRN3-211ENST00000494559 F8W1H4 67 aa10.77□□□□□ -0.69
PDZRN3-211ENST00000494559 OXLD1Q5BKU9 147 aa10.77□□□□□ -0.69
PDZRN3-211ENST00000494559 SFTA2Q6UW10 78 aa10.77□□□□□ -0.69
PDZRN3-211ENST00000494559 FLNBO75369 2602 aaKnown RBP10.77□□□□□ -0.69
PDZRN3-211ENST00000494559 LOC107984156A0A0G2JMH3 177 aa10.76□□□□□ -0.69
PDZRN3-211ENST00000494559 ARL17AQ8IVW1 177 aa10.76□□□□□ -0.69
PDZRN3-211ENST00000494559 PRO0461Q9UI25 63 aa10.76□□□□□ -0.69
PDZRN3-211ENST00000494559 A0A096LPF7 62 aa10.75□□□□□ -0.69
PDZRN3-211ENST00000494559 IGHV3OR16-9A0A0B4J2B5 98 aa10.75□□□□□ -0.69
PDZRN3-211ENST00000494559 A0A1B0GUV1 79 aa10.75□□□□□ -0.69
PDZRN3-211ENST00000494559 IGKV3OR2-268A0A0C4DH90 116 aa10.75□□□□□ -0.69
PDZRN3-211ENST00000494559 IFITM1P13164 125 aa10.75□□□□□ -0.69
PDZRN3-211ENST00000494559 KRTAP10-11P60412 298 aa10.75□□□□□ -0.69
PDZRN3-211ENST00000494559 ATP5G1P05496 136 aa10.74□□□□□ -0.69
PDZRN3-211ENST00000494559 WFDC2Q14508 124 aa10.74□□□□□ -0.69
PDZRN3-211ENST00000494559 LYRM7Q5U5X0 104 aa10.74□□□□□ -0.69
PDZRN3-211ENST00000494559 SPART-AS1P0CW21 52 aa10.73□□□□□ -0.69
PDZRN3-211ENST00000494559 NPC2P61916 151 aa10.73□□□□□ -0.69
PDZRN3-211ENST00000494559 CIRBPQ14011 172 aaKnown RBP10.73□□□□□ -0.69
PDZRN3-211ENST00000494559 DAND5Q8N907 189 aa10.73□□□□□ -0.69
PDZRN3-211ENST00000494559 ERG28Q9UKR5 140 aa10.73□□□□□ -0.69
PDZRN3-211ENST00000494559 LINC00959A0A1B0GUT2 108 aa10.73□□□□□ -0.69
PDZRN3-211ENST00000494559 K7ERU9 68 aa10.73□□□□□ -0.69
PDZRN3-211ENST00000494559 PRIMA1Q86XR5 153 aa10.73□□□□□ -0.69
PDZRN3-211ENST00000494559 TMEM262E9PQX1 116 aa10.72□□□□□ -0.69
PDZRN3-211ENST00000494559 PSMB2P49721 201 aa10.72□□□□□ -0.69
PDZRN3-211ENST00000494559 HERV-K104P63124 156 aa10.72□□□□□ -0.69
PDZRN3-211ENST00000494559 RNF151Q2KHN1 245 aa10.72□□□□□ -0.69
PDZRN3-211ENST00000494559 TRAV26-1A0A087WT03 109 aa10.72□□□□□ -0.69
PDZRN3-211ENST00000494559 TCL1BO95988 128 aa10.72□□□□□ -0.69
PDZRN3-211ENST00000494559 EGFEM1PQ0D2K5 195 aa10.72□□□□□ -0.69
PDZRN3-211ENST00000494559 A0A087WZ39 114 aa10.71□□□□□ -0.69
PDZRN3-211ENST00000494559 MTURNQ8N3F0 131 aa10.71□□□□□ -0.69
PDZRN3-211ENST00000494559 LINC00308Q8TCZ7 52 aa10.71□□□□□ -0.69
PDZRN3-211ENST00000494559 COX7B2Q8TF08 81 aa10.71□□□□□ -0.69
PDZRN3-211ENST00000494559 TRBV20-1A0A075B6N2 111 aa10.7□□□□□ -0.7
PDZRN3-211ENST00000494559 H7C2G1 150 aa10.7□□□□□ -0.7
PDZRN3-211ENST00000494559 C3orf56Q8N813 242 aa10.7□□□□□ -0.7
PDZRN3-211ENST00000494559 SHISA2Q6UWI4 295 aa10.69□□□□□ -0.7
PDZRN3-211ENST00000494559 SCGB1C2P0DMR2 95 aa10.69□□□□□ -0.7
PDZRN3-211ENST00000494559 SMCPP49901 116 aaPredicted RBP10.69□□□□□ -0.7
PDZRN3-211ENST00000494559 SOSTDC1Q6X4U4 206 aa10.69□□□□□ -0.7
PDZRN3-211ENST00000494559 A0A0U1RRA0 63 aa10.68□□□□□ -0.7
PDZRN3-211ENST00000494559 TEX48A0A1B0GUV7 120 aa10.68□□□□□ -0.7
PDZRN3-211ENST00000494559 G3V4G9 280 aa10.68□□□□□ -0.7
PDZRN3-211ENST00000494559 MEIG1Q5JSS6 88 aa10.68□□□□□ -0.7
PDZRN3-211ENST00000494559 C5orf38Q86SI9 138 aa10.68□□□□□ -0.7
PDZRN3-211ENST00000494559 VPS25Q9BRG1 176 aa10.68□□□□□ -0.7
PDZRN3-211ENST00000494559 FBN1P35555 2871 aaKnown RBP10.68□□□□□ -0.7
PDZRN3-211ENST00000494559 TRBV30A0A0K0K1B3 111 aa10.67□□□□□ -0.7
PDZRN3-211ENST00000494559 SS18Q15532 418 aa10.67□□□□□ -0.7
PDZRN3-211ENST00000494559 MRPL23Q16540 153 aaKnown RBP10.67□□□□□ -0.7
PDZRN3-211ENST00000494559 Q1RN00 199 aa10.67□□□□□ -0.7
PDZRN3-211ENST00000494559 SH2D6Q7Z4S9 175 aa10.67□□□□□ -0.7
PDZRN3-211ENST00000494559 HTN3P15516 51 aa10.66□□□□□ -0.7
PDZRN3-211ENST00000494559 ETDBQ3ZM63 59 aa10.66□□□□□ -0.7
PDZRN3-211ENST00000494559 PPDPFQ9H3Y8 114 aa10.66□□□□□ -0.7
PDZRN3-211ENST00000494559 TOMM7Q9P0U1 55 aa10.66□□□□□ -0.7
PDZRN3-211ENST00000494559 TRIAP1O43715 76 aa10.65□□□□□ -0.7
PDZRN3-211ENST00000494559 COPS9Q8WXC6 57 aa10.65□□□□□ -0.7
PDZRN3-211ENST00000494559 XCL1P47992 114 aa10.65□□□□□ -0.7
PDZRN3-211ENST00000494559 CLPSL2Q6UWE3 100 aa10.65□□□□□ -0.7
PDZRN3-211ENST00000494559 Q8N3U1 123 aa10.65□□□□□ -0.7
PDZRN3-211ENST00000494559 RETNQ9HD89 108 aa10.65□□□□□ -0.7
PDZRN3-211ENST00000494559 LINC00269Q8N2A0 174 aa10.64□□□□□ -0.71
PDZRN3-211ENST00000494559 ICOSQ9Y6W8 199 aa10.64□□□□□ -0.71
PDZRN3-211ENST00000494559 CYSRT1A8MQ03 144 aa10.64□□□□□ -0.71
PDZRN3-211ENST00000494559 LINC01561Q8N1V8 128 aa10.63□□□□□ -0.71
PDZRN3-211ENST00000494559 STAB1Q9NY15 2570 aa10.62□□□□□ -0.71
PDZRN3-211ENST00000494559 RPL13AP40429 203 aaKnown RBP10.62□□□□□ -0.71
PDZRN3-211ENST00000494559 LELP1Q5T871 98 aa10.62□□□□□ -0.71
PDZRN3-211ENST00000494559 ANGP03950 147 aaKnown RBP10.61□□□□□ -0.71
PDZRN3-211ENST00000494559 REG3AQ06141 175 aa10.61□□□□□ -0.71
PDZRN3-211ENST00000494559 CD164L2Q6UWJ8 174 aa10.61□□□□□ -0.71
PDZRN3-211ENST00000494559 CMYA5Q8N3K9 4069 aa10.6□□□□□ -0.71
PDZRN3-211ENST00000494559 IBA57-AS1B1ANH7 110 aa10.6□□□□□ -0.71
PDZRN3-211ENST00000494559 MIR7-3HGQ8N6C7 128 aa10.6□□□□□ -0.71
PDZRN3-211ENST00000494559 ATXN8Q156A1 80 aa10.59□□□□□ -0.71
PDZRN3-211ENST00000494559 Q8IZM0 81 aa10.59□□□□□ -0.71
PDZRN3-211ENST00000494559 CHCHD10Q8WYQ3 142 aaPredicted RBP10.59□□□□□ -0.71
PDZRN3-211ENST00000494559 C11orf68Q9H3H3 251 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms