RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 A0A1B0GUV1 79 aa11.42□□□□□ -0.58
ATG4B-225ENST00000494465 C9orf118A6NHY6 69 aa11.42□□□□□ -0.58
ATG4B-225ENST00000494465 SMIM1B2RUZ4 78 aa11.42□□□□□ -0.58
ATG4B-225ENST00000494465 SRSF9Q13242 221 aaKnown RBP eCLIP11.42□□□□□ -0.582e-8■■■□□ 15
ATG4B-225ENST00000494465 ZFAND6Q6FIF0 208 aa11.42□□□□□ -0.58
ATG4B-225ENST00000494465 RAB37Q96AX2 223 aa11.42□□□□□ -0.58
ATG4B-225ENST00000494465 IGHV3-30P01768 117 aa11.42□□□□□ -0.58
ATG4B-225ENST00000494465 IGHV3-30-5P0DP03 117 aa11.42□□□□□ -0.58
ATG4B-225ENST00000494465 NDUFA12Q9UI09 145 aa11.42□□□□□ -0.58
ATG4B-225ENST00000494465 PRB2P02812 416 aaPredicted RBP11.41□□□□□ -0.58
ATG4B-225ENST00000494465 RBX1P62877 108 aa11.41□□□□□ -0.58
ATG4B-225ENST00000494465 A0A1B0GWB2 263 aa11.41□□□□□ -0.58
ATG4B-225ENST00000494465 MRPL23Q16540 153 aaKnown RBP11.41□□□□□ -0.58
ATG4B-225ENST00000494465 PCP4P48539 62 aa11.4□□□□□ -0.58
ATG4B-225ENST00000494465 LITAFQ99732 161 aa11.4□□□□□ -0.58
ATG4B-225ENST00000494465 IGKV3OR2-268A0A0C4DH90 116 aa11.4□□□□□ -0.58
ATG4B-225ENST00000494465 TMEM262E9PQX1 116 aa11.4□□□□□ -0.58
ATG4B-225ENST00000494465 MDFIQ99750 246 aa11.4□□□□□ -0.58
ATG4B-225ENST00000494465 NAA38Q9BRA0 125 aaKnown RBP11.4□□□□□ -0.58
ATG4B-225ENST00000494465 ICOSQ9Y6W8 199 aa11.39□□□□□ -0.59
ATG4B-225ENST00000494465 H3BUT2 72 aa11.38□□□□□ -0.59
ATG4B-225ENST00000494465 VAMP3Q15836 100 aa11.38□□□□□ -0.59
ATG4B-225ENST00000494465 IGHV3OR16-9A0A0B4J2B5 98 aa11.38□□□□□ -0.59
ATG4B-225ENST00000494465 A0A0J9YWU9 116 aa11.38□□□□□ -0.59
ATG4B-225ENST00000494465 LINC00959A0A1B0GUT2 108 aa11.38□□□□□ -0.59
ATG4B-225ENST00000494465 K7EIL1 84 aa11.38□□□□□ -0.59
ATG4B-225ENST00000494465 Q6ZTC4 211 aa11.38□□□□□ -0.59
ATG4B-225ENST00000494465 NDUFA1O15239 70 aa11.37□□□□□ -0.59
ATG4B-225ENST00000494465 UBE2V1Q13404 147 aa11.37□□□□□ -0.59
ATG4B-225ENST00000494465 Q8N3U1 123 aa11.37□□□□□ -0.59
ATG4B-225ENST00000494465 CCL25O15444 150 aa11.36□□□□□ -0.59
ATG4B-225ENST00000494465 SH2D6Q7Z4S9 175 aa11.36□□□□□ -0.59
ATG4B-225ENST00000494465 TMEM238C9JI98 176 aa11.36□□□□□ -0.59
ATG4B-225ENST00000494465 KPRPQ5T749 579 aaPredicted RBP11.36□□□□□ -0.59
ATG4B-225ENST00000494465 ADAMTSL4-AS1Q5T5F5 129 aa11.35□□□□□ -0.59
ATG4B-225ENST00000494465 MGAM2Q2M2H8 2515 aa11.35□□□□□ -0.59
ATG4B-225ENST00000494465 LELP1Q5T871 98 aa11.35□□□□□ -0.59
ATG4B-225ENST00000494465 H3BNG1 76 aa11.34□□□□□ -0.59
ATG4B-225ENST00000494465 HUWE1Q7Z6Z7 4374 aaKnown RBP11.34□□□□□ -0.59
ATG4B-225ENST00000494465 A0A1W2PPM0 123 aa11.33□□□□□ -0.6
ATG4B-225ENST00000494465 CLPSL2Q6UWE3 100 aa11.33□□□□□ -0.6
ATG4B-225ENST00000494465 MUSTN1Q8IVN3 82 aa11.33□□□□□ -0.6
ATG4B-225ENST00000494465 ZNF625Q96I27 306 aaPredicted RBP11.33□□□□□ -0.6
ATG4B-225ENST00000494465 TM2D3Q9BRN9 247 aa11.33□□□□□ -0.6
ATG4B-225ENST00000494465 Q9H8V8 135 aa11.33□□□□□ -0.6
ATG4B-225ENST00000494465 A0A087WZ39 114 aa11.33□□□□□ -0.6
ATG4B-225ENST00000494465 IGLL5B9A064 214 aa11.33□□□□□ -0.6
ATG4B-225ENST00000494465 NANOS2P60321 138 aaKnown RBP11.33□□□□□ -0.6
ATG4B-225ENST00000494465 LYPD5Q6UWN5 251 aa11.33□□□□□ -0.6
ATG4B-225ENST00000494465 SPANXDQ9BXN6 97 aa11.33□□□□□ -0.6
ATG4B-225ENST00000494465 SPANXCQ9NY87 97 aa11.33□□□□□ -0.6
ATG4B-225ENST00000494465 TIMM17BO60830 172 aa11.32□□□□□ -0.6
ATG4B-225ENST00000494465 LINC00269Q8N2A0 174 aa11.32□□□□□ -0.6
ATG4B-225ENST00000494465 CFC1BP0CG36 223 aa11.32□□□□□ -0.6
ATG4B-225ENST00000494465 CFC1P0CG37 223 aa11.32□□□□□ -0.6
ATG4B-225ENST00000494465 C11orf45Q8TAV5 145 aa11.31□□□□□ -0.6
ATG4B-225ENST00000494465 SPATA25Q9BR10 227 aa11.31□□□□□ -0.6
ATG4B-225ENST00000494465 A4D1N5 150 aa11.31□□□□□ -0.6
ATG4B-225ENST00000494465 EIF4EBP3O60516 100 aaPredicted RBP11.31□□□□□ -0.6
ATG4B-225ENST00000494465 C5orf38Q86SI9 138 aa11.31□□□□□ -0.6
ATG4B-225ENST00000494465 APOMO95445 188 aa11.3□□□□□ -0.6
ATG4B-225ENST00000494465 SS18Q15532 418 aa11.3□□□□□ -0.6
ATG4B-225ENST00000494465 MIAQ16674 131 aa11.3□□□□□ -0.6
ATG4B-225ENST00000494465 ANGP03950 147 aaKnown RBP11.3□□□□□ -0.6
ATG4B-225ENST00000494465 XCL1P47992 114 aa11.3□□□□□ -0.6
ATG4B-225ENST00000494465 COX7B2Q8TF08 81 aa11.29□□□□□ -0.6
ATG4B-225ENST00000494465 RPL24P83731 157 aaKnown RBP11.28□□□□□ -0.6
ATG4B-225ENST00000494465 DEFB121Q5J5C9 76 aa11.28□□□□□ -0.6
ATG4B-225ENST00000494465 MRAPQ8TCY5 172 aa11.28□□□□□ -0.6
ATG4B-225ENST00000494465 REG3AQ06141 175 aa11.28□□□□□ -0.6
ATG4B-225ENST00000494465 DEFB131BA0A096LNP1 70 aa11.27□□□□□ -0.6
ATG4B-225ENST00000494465 K7EP34 96 aa11.27□□□□□ -0.6
ATG4B-225ENST00000494465 FABP2P12104 132 aa11.27□□□□□ -0.6
ATG4B-225ENST00000494465 PGPEP1Q9NXJ5 209 aa11.27□□□□□ -0.6
ATG4B-225ENST00000494465 GAGE10A6NGK3 116 aa11.27□□□□□ -0.61
ATG4B-225ENST00000494465 PRSS2P07478 247 aa11.27□□□□□ -0.61
ATG4B-225ENST00000494465 DAND5Q8N907 189 aa11.27□□□□□ -0.61
ATG4B-225ENST00000494465 TSPAN13O95857 204 aa11.26□□□□□ -0.61
ATG4B-225ENST00000494465 HERV-K104P63124 156 aa11.26□□□□□ -0.61
ATG4B-225ENST00000494465 SPCS1Q9Y6A9 102 aa11.26□□□□□ -0.61
ATG4B-225ENST00000494465 CHCHD10Q8WYQ3 142 aaPredicted RBP11.25□□□□□ -0.61
ATG4B-225ENST00000494465 TOMM7Q9P0U1 55 aa11.25□□□□□ -0.61
ATG4B-225ENST00000494465 NPC2P61916 151 aa11.25□□□□□ -0.61
ATG4B-225ENST00000494465 CIRBPQ14011 172 aaKnown RBP11.25□□□□□ -0.61
ATG4B-225ENST00000494465 CD164L2Q6UWJ8 174 aa11.25□□□□□ -0.61
ATG4B-225ENST00000494465 PRR34Q9NV39 138 aa11.25□□□□□ -0.61
ATG4B-225ENST00000494465 A0A0B4J2C4 111 aa11.24□□□□□ -0.61
ATG4B-225ENST00000494465 GTF2H5Q6ZYL4 71 aa11.24□□□□□ -0.61
ATG4B-225ENST00000494465 LINC01561Q8N1V8 128 aa11.24□□□□□ -0.61
ATG4B-225ENST00000494465 PRO1854Q9UHT4 67 aa11.24□□□□□ -0.61
ATG4B-225ENST00000494465 IGLV10-54A0A075B6I4 117 aa11.24□□□□□ -0.61
ATG4B-225ENST00000494465 IFITM1P13164 125 aa11.23□□□□□ -0.61
ATG4B-225ENST00000494465 ESRGQ1W209 222 aa11.23□□□□□ -0.61
ATG4B-225ENST00000494465 WFDC10BQ8IUB3 73 aa11.23□□□□□ -0.61
ATG4B-225ENST00000494465 A0A0U1RRA0 63 aa11.23□□□□□ -0.61
ATG4B-225ENST00000494465 KLK12Q9UKR0 248 aa11.23□□□□□ -0.61
ATG4B-225ENST00000494465 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.22□□□□□ -0.61
ATG4B-225ENST00000494465 MEIG1Q5JSS6 88 aa11.21□□□□□ -0.61
ATG4B-225ENST00000494465 ENHOQ6UWT2 76 aa11.21□□□□□ -0.61
ATG4B-225ENST00000494465 SOSTDC1Q6X4U4 206 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms