RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 CRYBA4P53673 196 aa4.24□□□□□ -1.73
CPSF7-213ENST00000494016 TSPEAR-AS2P59090 65 aa4.24□□□□□ -1.73
CPSF7-213ENST00000494016 AMMECR1LQ6DCA0 310 aa4.24□□□□□ -1.73
CPSF7-213ENST00000494016 NTM-AS1Q6ZSK4 140 aa4.24□□□□□ -1.73
CPSF7-213ENST00000494016 LINC00336Q6ZUF6 198 aa4.24□□□□□ -1.73
CPSF7-213ENST00000494016 Q8N9P0 234 aaPredicted RBP4.24□□□□□ -1.73
CPSF7-213ENST00000494016 C16orf74Q96GX8 76 aa4.24□□□□□ -1.73
CPSF7-213ENST00000494016 C1QTNF4Q9BXJ3 329 aa4.24□□□□□ -1.73
CPSF7-213ENST00000494016 UBE2D4Q9Y2X8 147 aa4.24□□□□□ -1.73
CPSF7-213ENST00000494016 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.23□□□□□ -1.73
CPSF7-213ENST00000494016 TRBV10-1A0A0K0K1A3 114 aa4.23□□□□□ -1.73
CPSF7-213ENST00000494016 IGKV2-29A2NJV5 120 aaPredicted RBP4.23□□□□□ -1.73
CPSF7-213ENST00000494016 K7EQD1 137 aa4.23□□□□□ -1.73
CPSF7-213ENST00000494016 LEPROTO15243 131 aa4.23□□□□□ -1.73
CPSF7-213ENST00000494016 GAGE7O76087 117 aa4.23□□□□□ -1.73
CPSF7-213ENST00000494016 GAGE12FP0CL80 117 aa4.23□□□□□ -1.73
CPSF7-213ENST00000494016 GAGE12GP0CL81 117 aa4.23□□□□□ -1.73
CPSF7-213ENST00000494016 GAGE12IP0CL82 117 aa4.23□□□□□ -1.73
CPSF7-213ENST00000494016 INSL3P51460 131 aa4.23□□□□□ -1.73
CPSF7-213ENST00000494016 SEC61BP60468 96 aaKnown RBP4.23□□□□□ -1.73
CPSF7-213ENST00000494016 UBE2D3P61077 147 aa4.23□□□□□ -1.73
CPSF7-213ENST00000494016 UBE2D2P62837 147 aa4.23□□□□□ -1.73
CPSF7-213ENST00000494016 MRPS36P82909 103 aaKnown RBP4.23□□□□□ -1.73
CPSF7-213ENST00000494016 TMEM170BQ5T4T1 132 aa4.23□□□□□ -1.73
CPSF7-213ENST00000494016 C9orf66Q5T8R8 295 aa4.23□□□□□ -1.73
CPSF7-213ENST00000494016 SBSPONQ8IVN8 264 aa4.23□□□□□ -1.73
CPSF7-213ENST00000494016 SLC25A29Q8N8R3 303 aa4.23□□□□□ -1.73
CPSF7-213ENST00000494016 OR5A1Q8NGJ0 315 aa4.23□□□□□ -1.73
CPSF7-213ENST00000494016 TIMM21Q9BVV7 248 aa4.23□□□□□ -1.73
CPSF7-213ENST00000494016 RYR3Q15413 4870 aa4.22□□□□□ -1.73
CPSF7-213ENST00000494016 A0A0J9YY99 117 aa4.22□□□□□ -1.73
CPSF7-213ENST00000494016 TINCRA0A1B0GVN0 87 aa4.22□□□□□ -1.73
CPSF7-213ENST00000494016 A0A1B0GWB2 263 aa4.22□□□□□ -1.73
CPSF7-213ENST00000494016 ZNF815PA8K554 130 aa4.22□□□□□ -1.73
CPSF7-213ENST00000494016 J3QQQ9 107 aa4.22□□□□□ -1.73
CPSF7-213ENST00000494016 IGKV2-30P06310 120 aa4.22□□□□□ -1.73
CPSF7-213ENST00000494016 HERVK_113P61574 105 aa4.22□□□□□ -1.73
CPSF7-213ENST00000494016 RRN3P1Q2M238 152 aa4.22□□□□□ -1.73
CPSF7-213ENST00000494016 C12orf74Q32Q52 190 aa4.22□□□□□ -1.73
CPSF7-213ENST00000494016 RNASE13Q5GAN3 156 aaKnown RBP4.22□□□□□ -1.73
CPSF7-213ENST00000494016 LINC00612Q8N6U2 182 aa4.22□□□□□ -1.73
CPSF7-213ENST00000494016 WFDC9Q8NEX5 89 aa4.22□□□□□ -1.73
CPSF7-213ENST00000494016 RAB37Q96AX2 223 aa4.22□□□□□ -1.73
CPSF7-213ENST00000494016 HIST1H4GQ99525 98 aa4.22□□□□□ -1.73
CPSF7-213ENST00000494016 RETNQ9HD89 108 aa4.22□□□□□ -1.73
CPSF7-213ENST00000494016 SPANXA1Q9NS26 97 aa4.22□□□□□ -1.73
CPSF7-213ENST00000494016 KMT2CQ8NEZ4 4911 aaKnown RBP4.22□□□□□ -1.73
CPSF7-213ENST00000494016 DNAH3Q8TD57 4116 aa4.21□□□□□ -1.74
CPSF7-213ENST00000494016 LOC100131303A0A0U1RQF7 123 aa4.21□□□□□ -1.74
CPSF7-213ENST00000494016 GAGE12JA6NER3 117 aa4.21□□□□□ -1.74
CPSF7-213ENST00000494016 H3BUT2 72 aa4.21□□□□□ -1.74
CPSF7-213ENST00000494016 LINC00694P0DN24 101 aa4.21□□□□□ -1.74
CPSF7-213ENST00000494016 UBE2D1P51668 147 aa4.21□□□□□ -1.74
CPSF7-213ENST00000494016 KRTAP10-11P60412 298 aa4.21□□□□□ -1.74
CPSF7-213ENST00000494016 RPL36AP83881 106 aaKnown RBP4.21□□□□□ -1.74
CPSF7-213ENST00000494016 GAGE4Q13068 117 aa4.21□□□□□ -1.74
CPSF7-213ENST00000494016 GAGE5Q13069 117 aa4.21□□□□□ -1.74
CPSF7-213ENST00000494016 Q6ZUT4 128 aa4.21□□□□□ -1.74
CPSF7-213ENST00000494016 DAZ4Q86SG3 579 aaKnown RBP4.21□□□□□ -1.74
CPSF7-213ENST00000494016 PRR26Q8N8Z3 221 aa4.21□□□□□ -1.74
CPSF7-213ENST00000494016 KIR2DL5BQ8NHK3 375 aa4.21□□□□□ -1.74
CPSF7-213ENST00000494016 NAA38Q9BRA0 125 aaKnown RBP4.21□□□□□ -1.74
CPSF7-213ENST00000494016 DAZ3Q9NR90 486 aaKnown RBP4.21□□□□□ -1.74
CPSF7-213ENST00000494016 IGLV5-39A0A0G2JS06 123 aa4.2□□□□□ -1.74
CPSF7-213ENST00000494016 TRBV6-4A0A1B0GX49 114 aa4.2□□□□□ -1.74
CPSF7-213ENST00000494016 A0A1W2PPM0 123 aa4.2□□□□□ -1.74
CPSF7-213ENST00000494016 SMIM9A6NGZ8 99 aa4.2□□□□□ -1.74
CPSF7-213ENST00000494016 IGLL5B9A064 214 aa4.2□□□□□ -1.74
CPSF7-213ENST00000494016 K7ERJ3 54 aa4.2□□□□□ -1.74
CPSF7-213ENST00000494016 COX6A2Q02221 97 aa4.2□□□□□ -1.74
CPSF7-213ENST00000494016 FAM19A3Q7Z5A8 133 aa4.2□□□□□ -1.74
CPSF7-213ENST00000494016 GTSF1LQ9H1H1 148 aa4.2□□□□□ -1.74
CPSF7-213ENST00000494016 SPANXB1Q9NS25 103 aaPredicted RBP4.2□□□□□ -1.74
CPSF7-213ENST00000494016 NHP2Q9NX24 153 aaKnown RBP4.2□□□□□ -1.74
CPSF7-213ENST00000494016 TRGV2A0A075B6R0 118 aa4.19□□□□□ -1.74
CPSF7-213ENST00000494016 TRAV8-3A0A0A6YYJ7 113 aa4.19□□□□□ -1.74
CPSF7-213ENST00000494016 TRGV4A0A0C4DH28 118 aa4.19□□□□□ -1.74
CPSF7-213ENST00000494016 IGHV1-58A0A0C4DH39 117 aa4.19□□□□□ -1.74
CPSF7-213ENST00000494016 K7EP34 96 aa4.19□□□□□ -1.74
CPSF7-213ENST00000494016 IGHV3-30P01768 117 aa4.19□□□□□ -1.74
CPSF7-213ENST00000494016 IGHV3-30-3P0DP02 117 aa4.19□□□□□ -1.74
CPSF7-213ENST00000494016 IGHV3-30-5P0DP03 117 aa4.19□□□□□ -1.74
CPSF7-213ENST00000494016 CDC42SE2Q9NRR3 84 aa4.19□□□□□ -1.74
CPSF7-213ENST00000494016 IGHV3-64A0A075B6Q5 118 aa4.18□□□□□ -1.74
CPSF7-213ENST00000494016 IGLV5-45A0A087WSX0 123 aa4.18□□□□□ -1.74
CPSF7-213ENST00000494016 A0A0J9YXY3 114 aa4.18□□□□□ -1.74
CPSF7-213ENST00000494016 LGALS3P17931 250 aaKnown RBP4.18□□□□□ -1.74
CPSF7-213ENST00000494016 SRSF9Q13242 221 aaKnown RBP eCLIP4.18□□□□□ -1.74
CPSF7-213ENST00000494016 LINC00242Q5T6M2 205 aa4.18□□□□□ -1.74
CPSF7-213ENST00000494016 SCGB1D4Q6XE38 83 aa4.18□□□□□ -1.74
CPSF7-213ENST00000494016 LINC01561Q8N1V8 128 aa4.18□□□□□ -1.74
CPSF7-213ENST00000494016 C10orf126Q8N4M7 172 aa4.18□□□□□ -1.74
CPSF7-213ENST00000494016 VSIG2Q96IQ7 327 aa4.18□□□□□ -1.74
CPSF7-213ENST00000494016 CDKN2A-AS1Q9UH64 79 aa4.18□□□□□ -1.74
CPSF7-213ENST00000494016 H7C423 109 aa4.17□□□□□ -1.74
CPSF7-213ENST00000494016 SPINK8P0C7L1 97 aa4.17□□□□□ -1.74
CPSF7-213ENST00000494016 CFC1BP0CG36 223 aa4.17□□□□□ -1.74
CPSF7-213ENST00000494016 CFC1P0CG37 223 aa4.17□□□□□ -1.74
CPSF7-213ENST00000494016 DEFB130BP0DP73 79 aa4.17□□□□□ -1.74
CPSF7-213ENST00000494016 DEFB130AP0DP74 79 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms