RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 ALMS1Q8TCU4 4167 aa2□□□□□ -2.09
SMC2-205ENST00000493955 F8W1H4 67 aa2□□□□□ -2.09
SMC2-205ENST00000493955 GNGT2O14610 69 aa2□□□□□ -2.09
SMC2-205ENST00000493955 NDUFA2O43678 99 aa2□□□□□ -2.09
SMC2-205ENST00000493955 NUPR1O60356 82 aa2□□□□□ -2.09
SMC2-205ENST00000493955 COX4I1P13073 169 aa2□□□□□ -2.09
SMC2-205ENST00000493955 ZNF25P17030 456 aaPredicted RBP2□□□□□ -2.09
SMC2-205ENST00000493955 SELENOWP63302 87 aa2□□□□□ -2.09
SMC2-205ENST00000493955 MRPS36P82909 103 aaKnown RBP2□□□□□ -2.09
SMC2-205ENST00000493955 CIRBPQ14011 172 aaKnown RBP2□□□□□ -2.09
SMC2-205ENST00000493955 DIAPH2-AS1Q14236 149 aa2□□□□□ -2.09
SMC2-205ENST00000493955 TEN1Q86WV5 123 aa2□□□□□ -2.09
SMC2-205ENST00000493955 DIRC1Q969H9 104 aa2□□□□□ -2.09
SMC2-205ENST00000493955 ODF3Q96PU9 254 aa2□□□□□ -2.09
SMC2-205ENST00000493955 TAF9BQ9HBM6 251 aa2□□□□□ -2.09
SMC2-205ENST00000493955 SAR1AQ9NR31 198 aa2□□□□□ -2.09
SMC2-205ENST00000493955 A6NIN4 97 aa1.99□□□□□ -2.09
SMC2-205ENST00000493955 H3BSH0 61 aa1.99□□□□□ -2.09
SMC2-205ENST00000493955 HAGHLQ6PII5 290 aaPredicted RBP1.99□□□□□ -2.09
SMC2-205ENST00000493955 LINC00305Q7Z4B0 112 aa1.99□□□□□ -2.09
SMC2-205ENST00000493955 OR4B1Q8NGF8 309 aa1.99□□□□□ -2.09
SMC2-205ENST00000493955 SPTSSAQ969W0 71 aa1.99□□□□□ -2.09
SMC2-205ENST00000493955 HERC2O95714 4834 aa1.98□□□□□ -2.09
SMC2-205ENST00000493955 FLG2Q5D862 2391 aaPredicted RBP1.98□□□□□ -2.09
SMC2-205ENST00000493955 IGLV3-1P01715 115 aa1.98□□□□□ -2.09
SMC2-205ENST00000493955 EDDM3BP56851 147 aa1.98□□□□□ -2.09
SMC2-205ENST00000493955 RPL13AP3Q6NVV1 102 aa1.98□□□□□ -2.09
SMC2-205ENST00000493955 DEFB107AQ8IZN7 70 aa1.98□□□□□ -2.09
SMC2-205ENST00000493955 C5orf56Q8N8D9 126 aa1.98□□□□□ -2.09
SMC2-205ENST00000493955 OR5H6Q8NGV6 325 aa1.98□□□□□ -2.09
SMC2-205ENST00000493955 LEAP2Q969E1 77 aa1.98□□□□□ -2.09
SMC2-205ENST00000493955 NOP16Q9Y3C1 178 aaKnown RBP1.98□□□□□ -2.09
SMC2-205ENST00000493955 TPRKBQ9Y3C4 175 aa1.98□□□□□ -2.09
SMC2-205ENST00000493955 MPC1Q9Y5U8 109 aa1.98□□□□□ -2.09
SMC2-205ENST00000493955 STAB2Q8WWQ8 2551 aa1.98□□□□□ -2.09
SMC2-205ENST00000493955 FRAS1Q86XX4 4008 aa1.97□□□□□ -2.09
SMC2-205ENST00000493955 PCLOQ9Y6V0 5065 aa1.97□□□□□ -2.09
SMC2-205ENST00000493955 M0R129 80 aa1.97□□□□□ -2.09
SMC2-205ENST00000493955 DNAL4O96015 105 aa1.97□□□□□ -2.09
SMC2-205ENST00000493955 IFNGP01579 166 aa1.97□□□□□ -2.09
SMC2-205ENST00000493955 COX7CP15954 63 aa1.97□□□□□ -2.09
SMC2-205ENST00000493955 SMIM21Q3B7S5 101 aa1.97□□□□□ -2.09
SMC2-205ENST00000493955 MINOS1Q5TGZ0 78 aa1.97□□□□□ -2.09
SMC2-205ENST00000493955 OTOSQ8NHW6 89 aa1.97□□□□□ -2.09
SMC2-205ENST00000493955 PRELID3AQ96N28 172 aa1.97□□□□□ -2.09
SMC2-205ENST00000493955 NABP2Q9BQ15 211 aa1.97□□□□□ -2.09
SMC2-205ENST00000493955 TMEM14CQ9P0S9 112 aa1.97□□□□□ -2.09
SMC2-205ENST00000493955 HMGN1P05114 100 aa1.96□□□□□ -2.1
SMC2-205ENST00000493955 FABP4P15090 132 aa1.96□□□□□ -2.1
SMC2-205ENST00000493955 DEFA5Q01523 94 aa1.96□□□□□ -2.1
SMC2-205ENST00000493955 OR10AG1Q8NH19 301 aa1.96□□□□□ -2.1
SMC2-205ENST00000493955 MYOZ3Q8TDC0 251 aa1.96□□□□□ -2.1
SMC2-205ENST00000493955 OR4C12Q96R67 309 aa1.96□□□□□ -2.1
SMC2-205ENST00000493955 WFDC10AQ9H1F0 79 aa1.96□□□□□ -2.1
SMC2-205ENST00000493955 Q9H521 79 aa1.96□□□□□ -2.1
SMC2-205ENST00000493955 AP4S1Q9Y587 144 aa1.96□□□□□ -2.1
SMC2-205ENST00000493955 LINC00312Q9Y6C7 94 aa1.96□□□□□ -2.1
SMC2-205ENST00000493955 V9GYS6 101 aa1.96□□□□□ -2.1
SMC2-205ENST00000493955 TNCP24821 2201 aa1.96□□□□□ -2.1
SMC2-205ENST00000493955 PLECQ15149 4684 aaKnown RBP1.95□□□□□ -2.1
SMC2-205ENST00000493955 TRBV7-6A0A0J9YX20 115 aa1.95□□□□□ -2.1
SMC2-205ENST00000493955 C9orf170A2RU37 121 aa1.95□□□□□ -2.1
SMC2-205ENST00000493955 G3V318 75 aa1.95□□□□□ -2.1
SMC2-205ENST00000493955 H3BRM9 83 aa1.95□□□□□ -2.1
SMC2-205ENST00000493955 OR2H2O95918 312 aa1.95□□□□□ -2.1
SMC2-205ENST00000493955 APOC1P02654 83 aa1.95□□□□□ -2.1
SMC2-205ENST00000493955 RBP4P02753 201 aa1.95□□□□□ -2.1
SMC2-205ENST00000493955 SLC25A26Q70HW3 274 aa1.95□□□□□ -2.1
SMC2-205ENST00000493955 Q8N6K4 173 aa1.95□□□□□ -2.1
SMC2-205ENST00000493955 OR5A2Q8NGI9 324 aa1.95□□□□□ -2.1
SMC2-205ENST00000493955 OR10AC1Q8NH08 325 aa1.95□□□□□ -2.1
SMC2-205ENST00000493955 PYDC1Q8WXC3 89 aa1.95□□□□□ -2.1
SMC2-205ENST00000493955 CMC2Q9NRP2 79 aa1.95□□□□□ -2.1
SMC2-205ENST00000493955 TRAV13-1A0A0B4J241 112 aa1.94□□□□□ -2.1
SMC2-205ENST00000493955 TRBV27A0A0K0K1C4 114 aa1.94□□□□□ -2.1
SMC2-205ENST00000493955 H3BMG7 143 aa1.94□□□□□ -2.1
SMC2-205ENST00000493955 LY6G6CO95867 125 aa1.94□□□□□ -2.1
SMC2-205ENST00000493955 RPS28P62857 69 aaKnown RBP1.94□□□□□ -2.1
SMC2-205ENST00000493955 VMA21Q3ZAQ7 101 aa1.94□□□□□ -2.1
SMC2-205ENST00000493955 HEPN1Q6WQI6 88 aa1.94□□□□□ -2.1
SMC2-205ENST00000493955 LINC00322Q6ZN03 302 aaPredicted RBP1.94□□□□□ -2.1
SMC2-205ENST00000493955 KIAA1109Q2LD37 5005 aa1.94□□□□□ -2.1
SMC2-205ENST00000493955 MUC4Q99102 2169 aa1.94□□□□□ -2.1
SMC2-205ENST00000493955 HECTD4Q9Y4D8 3996 aa1.94□□□□□ -2.1
SMC2-205ENST00000493955 KMT2AQ03164 3969 aa1.94□□□□□ -2.1
SMC2-205ENST00000493955 LOC107986453A0A1B0GWG9 222 aa1.93□□□□□ -2.1
SMC2-205ENST00000493955 OR51A4Q8NGJ6 313 aa1.93□□□□□ -2.1
SMC2-205ENST00000493955 FAM103A1Q9BTL3 118 aaKnown RBP1.93□□□□□ -2.1
SMC2-205ENST00000493955 TMEM138Q9NPI0 162 aa1.93□□□□□ -2.1
SMC2-205ENST00000493955 NIT2Q9NQR4 276 aa1.93□□□□□ -2.1
SMC2-205ENST00000493955 R4GMQ9 66 aa1.93□□□□□ -2.1
SMC2-205ENST00000493955 TCRBV3S1A0A5B6 114 aa1.92□□□□□ -2.1
SMC2-205ENST00000493955 M0QZK8 103 aa1.92□□□□□ -2.1
SMC2-205ENST00000493955 PIGYQ3MUY2 71 aa1.92□□□□□ -2.1
SMC2-205ENST00000493955 TMEM229BQ8NBD8 167 aa1.92□□□□□ -2.1
SMC2-205ENST00000493955 CST11Q9H112 138 aa1.92□□□□□ -2.1
SMC2-205ENST00000493955 SCN3BQ9NY72 215 aa1.92□□□□□ -2.1
SMC2-205ENST00000493955 DNAH10Q8IVF4 4471 aa1.92□□□□□ -2.1
SMC2-205ENST00000493955 LOC107984640A0A0U1RRK4 108 aa1.91□□□□□ -2.1
SMC2-205ENST00000493955 OOSP1A8MZH6 123 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms