RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 PAPPA-AS1Q5QFB9 102 aa11.71□□□□□ -0.53
PDLIM7-208ENST00000493815 LINC00242Q5T6M2 205 aa11.71□□□□□ -0.53
PDLIM7-208ENST00000493815 C15orf56Q8N910 161 aa11.71□□□□□ -0.53
PDLIM7-208ENST00000493815 PRSS1P07477 247 aa11.71□□□□□ -0.54
PDLIM7-208ENST00000493815 NDUFA6P56556 154 aa11.7□□□□□ -0.54
PDLIM7-208ENST00000493815 HIGD2BQ4VC39 106 aa11.7□□□□□ -0.54
PDLIM7-208ENST00000493815 CST9LQ9H4G1 147 aa11.7□□□□□ -0.54
PDLIM7-208ENST00000493815 DNAH5Q8TE73 4624 aa11.7□□□□□ -0.54
PDLIM7-208ENST00000493815 hDV102S1A0JD36 115 aa11.69□□□□□ -0.54
PDLIM7-208ENST00000493815 COX7A2LO14548 114 aa11.69□□□□□ -0.54
PDLIM7-208ENST00000493815 IGLV5-52A0A0A0MRZ9 124 aa11.68□□□□□ -0.54
PDLIM7-208ENST00000493815 IGHV3OR16-9A0A0B4J2B5 98 aa11.68□□□□□ -0.54
PDLIM7-208ENST00000493815 C16orf90A8MZG2 172 aa11.68□□□□□ -0.54
PDLIM7-208ENST00000493815 PGPEP1Q9NXJ5 209 aa11.68□□□□□ -0.54
PDLIM7-208ENST00000493815 A0A0J9YXV3 536 aa11.68□□□□□ -0.54
PDLIM7-208ENST00000493815 MALP21145 153 aa11.68□□□□□ -0.54
PDLIM7-208ENST00000493815 PMVKQ15126 192 aa11.68□□□□□ -0.54
PDLIM7-208ENST00000493815 C14orf177Q52M58 125 aa11.68□□□□□ -0.54
PDLIM7-208ENST00000493815 LINC00526Q96FQ7 95 aa11.68□□□□□ -0.54
PDLIM7-208ENST00000493815 ATP5LO75964 103 aa11.67□□□□□ -0.54
PDLIM7-208ENST00000493815 LINC01620Q4KN68 170 aa11.67□□□□□ -0.54
PDLIM7-208ENST00000493815 NTN5Q8WTR8 489 aaPredicted RBP11.67□□□□□ -0.54
PDLIM7-208ENST00000493815 CTAG1AP78358 180 aa11.66□□□□□ -0.54
PDLIM7-208ENST00000493815 CFAP161Q6P656 301 aa11.66□□□□□ -0.54
PDLIM7-208ENST00000493815 FABP4P15090 132 aa11.65□□□□□ -0.54
PDLIM7-208ENST00000493815 IFI27L1Q96BM0 104 aa11.65□□□□□ -0.54
PDLIM7-208ENST00000493815 IGHV1-58A0A0C4DH39 117 aa11.65□□□□□ -0.55
PDLIM7-208ENST00000493815 SLPIP03973 132 aa11.65□□□□□ -0.55
PDLIM7-208ENST00000493815 DYNC1H1Q14204 4646 aaKnown RBP11.65□□□□□ -0.55
PDLIM7-208ENST00000493815 CDPF1Q6NVV7 123 aa11.64□□□□□ -0.55
PDLIM7-208ENST00000493815 GEMIN7Q9H840 131 aaKnown RBP11.64□□□□□ -0.55
PDLIM7-208ENST00000493815 GVQW2A0A096LPI5 108 aaPredicted RBP11.63□□□□□ -0.55
PDLIM7-208ENST00000493815 LEPROTL1O95214 131 aa11.63□□□□□ -0.55
PDLIM7-208ENST00000493815 FAM19A3Q7Z5A8 133 aa11.63□□□□□ -0.55
PDLIM7-208ENST00000493815 A0A087WZ39 114 aa11.62□□□□□ -0.55
PDLIM7-208ENST00000493815 H0Y8G0 127 aa11.62□□□□□ -0.55
PDLIM7-208ENST00000493815 CDKN2A-AS1Q9UH64 79 aa11.62□□□□□ -0.55
PDLIM7-208ENST00000493815 LRP1BQ9NZR2 4599 aa11.62□□□□□ -0.55
PDLIM7-208ENST00000493815 KRTAP10-1P60331 282 aa11.62□□□□□ -0.55
PDLIM7-208ENST00000493815 HERVK_113P63121 156 aa11.62□□□□□ -0.55
PDLIM7-208ENST00000493815 BIRC6Q9NR09 4857 aa11.61□□□□□ -0.55
PDLIM7-208ENST00000493815 TINCRA0A1B0GVN0 87 aa11.61□□□□□ -0.55
PDLIM7-208ENST00000493815 GCSHP23434 173 aa11.61□□□□□ -0.55
PDLIM7-208ENST00000493815 SEC11AP67812 179 aa11.61□□□□□ -0.55
PDLIM7-208ENST00000493815 LINC00469Q8N7U9 141 aa11.61□□□□□ -0.55
PDLIM7-208ENST00000493815 ORAOV1Q8WV07 137 aa11.61□□□□□ -0.55
PDLIM7-208ENST00000493815 IGLV4-69A0A075B6H9 119 aa11.6□□□□□ -0.55
PDLIM7-208ENST00000493815 ZNF561-AS1K7EIQ3 104 aa11.6□□□□□ -0.55
PDLIM7-208ENST00000493815 COA6Q5JTJ3 125 aaKnown RBP11.6□□□□□ -0.55
PDLIM7-208ENST00000493815 IGHV3-64A0A075B6Q5 118 aa11.59□□□□□ -0.55
PDLIM7-208ENST00000493815 APOMO95445 188 aa11.59□□□□□ -0.55
PDLIM7-208ENST00000493815 SPAG11BQ08648 103 aa11.59□□□□□ -0.55
PDLIM7-208ENST00000493815 CHAC1Q9BUX1 264 aa11.59□□□□□ -0.55
PDLIM7-208ENST00000493815 HSPB8Q9UJY1 196 aa11.59□□□□□ -0.55
PDLIM7-208ENST00000493815 IGLC3P0DOY3 106 aa11.58□□□□□ -0.56
PDLIM7-208ENST00000493815 CNBPP62633 177 aaKnown RBP11.58□□□□□ -0.56
PDLIM7-208ENST00000493815 CHTOPQ9Y3Y2 248 aaKnown RBP11.58□□□□□ -0.56
PDLIM7-208ENST00000493815 IGLV5-45A0A087WSX0 123 aa11.56□□□□□ -0.56
PDLIM7-208ENST00000493815 TRAV12-1A0A0B4J245 112 aa11.56□□□□□ -0.56
PDLIM7-208ENST00000493815 C11orf86A6NJI1 115 aa11.56□□□□□ -0.56
PDLIM7-208ENST00000493815 OR10D4PQ8NGN7 298 aa11.56□□□□□ -0.56
PDLIM7-208ENST00000493815 MRPL35Q9NZE8 188 aaKnown RBP11.56□□□□□ -0.56
PDLIM7-208ENST00000493815 PACRGQ96M98 296 aaPredicted RBP11.55□□□□□ -0.56
PDLIM7-208ENST00000493815 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.55□□□□□ -0.56
PDLIM7-208ENST00000493815 SPINK8P0C7L1 97 aa11.55□□□□□ -0.56
PDLIM7-208ENST00000493815 C9orf163Q8N9P6 203 aa11.55□□□□□ -0.56
PDLIM7-208ENST00000493815 TOMM7Q9P0U1 55 aa11.55□□□□□ -0.56
PDLIM7-208ENST00000493815 SMIM1B2RUZ4 78 aa11.54□□□□□ -0.56
PDLIM7-208ENST00000493815 ZNF22P17026 224 aaPredicted RBP11.54□□□□□ -0.56
PDLIM7-208ENST00000493815 KIAA0087Q14695 138 aa11.54□□□□□ -0.56
PDLIM7-208ENST00000493815 CAMK2N2Q96S95 79 aa11.54□□□□□ -0.56
PDLIM7-208ENST00000493815 PMCHL2Q9BQD1 86 aa11.54□□□□□ -0.56
PDLIM7-208ENST00000493815 SYCNQ0VAF6 134 aa11.53□□□□□ -0.56
PDLIM7-208ENST00000493815 ODF1Q14990 250 aa11.53□□□□□ -0.56
PDLIM7-208ENST00000493815 Q6ZRU5 148 aa11.53□□□□□ -0.56
PDLIM7-208ENST00000493815 LINC01561Q8N1V8 128 aa11.53□□□□□ -0.56
PDLIM7-208ENST00000493815 FAM30AQ9NZY2 134 aa11.53□□□□□ -0.56
PDLIM7-208ENST00000493815 F8VRH5 84 aa11.52□□□□□ -0.56
PDLIM7-208ENST00000493815 HAMPP81172 84 aa11.52□□□□□ -0.56
PDLIM7-208ENST00000493815 TMEM170BQ5T4T1 132 aa11.52□□□□□ -0.56
PDLIM7-208ENST00000493815 CARD19Q96LW7 228 aa11.52□□□□□ -0.56
PDLIM7-208ENST00000493815 C10orf25Q5T742 122 aa11.52□□□□□ -0.57
PDLIM7-208ENST00000493815 C2orf82Q6UX34 121 aa11.52□□□□□ -0.57
PDLIM7-208ENST00000493815 MAP1LC3CQ9BXW4 147 aa11.52□□□□□ -0.57
PDLIM7-208ENST00000493815 KIAA1109Q2LD37 5005 aa11.51□□□□□ -0.57
PDLIM7-208ENST00000493815 H3BRM9 83 aa11.51□□□□□ -0.57
PDLIM7-208ENST00000493815 UNQ6190/PRO20217Q6UXQ8 127 aa11.51□□□□□ -0.57
PDLIM7-208ENST00000493815 C2orf48Q96LS8 159 aa11.51□□□□□ -0.57
PDLIM7-208ENST00000493815 LOC105371267A0A1B0GV96 52 aa11.5□□□□□ -0.57
PDLIM7-208ENST00000493815 SDIM1Q6ZPB5 146 aa11.5□□□□□ -0.57
PDLIM7-208ENST00000493815 S100A6P06703 90 aa11.49□□□□□ -0.57
PDLIM7-208ENST00000493815 PRSS2P07478 247 aa11.49□□□□□ -0.57
PDLIM7-208ENST00000493815 APOBP04114 4563 aaKnown RBP11.49□□□□□ -0.57
PDLIM7-208ENST00000493815 C6orf226Q5I0X4 101 aa11.49□□□□□ -0.57
PDLIM7-208ENST00000493815 SYS1-DBNDD2H3BUS1 97 aa11.48□□□□□ -0.57
PDLIM7-208ENST00000493815 NDUFA1O15239 70 aa11.48□□□□□ -0.57
PDLIM7-208ENST00000493815 Q8IZM0 81 aa11.48□□□□□ -0.57
PDLIM7-208ENST00000493815 PANO1I0J062 215 aa11.47□□□□□ -0.57
PDLIM7-208ENST00000493815 HIST3H2BBQ8N257 126 aa11.47□□□□□ -0.57
PDLIM7-208ENST00000493815 COX7B2Q8TF08 81 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms