RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 FOXI1Q12951 378 aa5.04□□□□□ -1.6
VEGFA-214ENST00000493786 COA6Q5JTJ3 125 aaKnown RBP5.04□□□□□ -1.6
VEGFA-214ENST00000493786 ZC2HC1BQ5TFG8 222 aa5.04□□□□□ -1.6
VEGFA-214ENST00000493786 LINC00173Q6ZV60 143 aa5.04□□□□□ -1.6
VEGFA-214ENST00000493786 PACRGQ96M98 296 aaPredicted RBP5.04□□□□□ -1.6
VEGFA-214ENST00000493786 CST9LQ9H4G1 147 aa5.04□□□□□ -1.6
VEGFA-214ENST00000493786 FRAS1Q86XX4 4008 aa5.03□□□□□ -1.6
VEGFA-214ENST00000493786 IGHV1-58A0A0C4DH39 117 aa5.03□□□□□ -1.6
VEGFA-214ENST00000493786 A0A0J9YXV3 536 aa5.03□□□□□ -1.6
VEGFA-214ENST00000493786 LRCOL1A6NCL2 159 aa5.03□□□□□ -1.6
VEGFA-214ENST00000493786 S100A2P29034 98 aa5.03□□□□□ -1.6
VEGFA-214ENST00000493786 LINC00242Q5T6M2 205 aa5.03□□□□□ -1.6
VEGFA-214ENST00000493786 KRTAP26-1Q6PEX3 210 aa5.03□□□□□ -1.6
VEGFA-214ENST00000493786 C5orf38Q86SI9 138 aa5.03□□□□□ -1.6
VEGFA-214ENST00000493786 LINC00518Q8N0U6 118 aa5.03□□□□□ -1.6
VEGFA-214ENST00000493786 LINC00469Q8N7U9 141 aa5.03□□□□□ -1.6
VEGFA-214ENST00000493786 Q8N814 137 aa5.03□□□□□ -1.6
VEGFA-214ENST00000493786 MAPKAPK5-AS1Q8N8E1 139 aa5.03□□□□□ -1.6
VEGFA-214ENST00000493786 MAP1LC3CQ9BXW4 147 aa5.03□□□□□ -1.6
VEGFA-214ENST00000493786 CHTOPQ9Y3Y2 248 aaKnown RBP5.03□□□□□ -1.6
VEGFA-214ENST00000493786 TRAV12-1A0A0B4J245 112 aa5.02□□□□□ -1.61
VEGFA-214ENST00000493786 TINCRA0A1B0GVN0 87 aa5.02□□□□□ -1.61
VEGFA-214ENST00000493786 hDV102S1A0JD36 115 aa5.02□□□□□ -1.61
VEGFA-214ENST00000493786 H3BRM9 83 aa5.02□□□□□ -1.61
VEGFA-214ENST00000493786 S100A12P80511 92 aa5.02□□□□□ -1.61
VEGFA-214ENST00000493786 FAM19A3Q7Z5A8 133 aa5.02□□□□□ -1.61
VEGFA-214ENST00000493786 NTN5Q8WTR8 489 aaPredicted RBP5.02□□□□□ -1.61
VEGFA-214ENST00000493786 CHAC1Q9BUX1 264 aa5.02□□□□□ -1.61
VEGFA-214ENST00000493786 DNAH2Q9P225 4427 aa5.02□□□□□ -1.61
VEGFA-214ENST00000493786 DNAH10Q8IVF4 4471 aa5.02□□□□□ -1.61
VEGFA-214ENST00000493786 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.01□□□□□ -1.61
VEGFA-214ENST00000493786 A0A087WZ39 114 aa5.01□□□□□ -1.61
VEGFA-214ENST00000493786 IGLV5-52A0A0A0MRZ9 124 aa5.01□□□□□ -1.61
VEGFA-214ENST00000493786 IGHV3OR16-9A0A0B4J2B5 98 aa5.01□□□□□ -1.61
VEGFA-214ENST00000493786 ZNF561-AS1K7EIQ3 104 aa5.01□□□□□ -1.61
VEGFA-214ENST00000493786 PRSS2P07478 247 aa5.01□□□□□ -1.61
VEGFA-214ENST00000493786 WFDC2Q14508 124 aa5.01□□□□□ -1.61
VEGFA-214ENST00000493786 HIGD2BQ4VC39 106 aa5.01□□□□□ -1.61
VEGFA-214ENST00000493786 CDPF1Q6NVV7 123 aa5.01□□□□□ -1.61
VEGFA-214ENST00000493786 SPATA12Q7Z6I5 190 aa5.01□□□□□ -1.61
VEGFA-214ENST00000493786 OR10D4PQ8NGN7 298 aa5.01□□□□□ -1.61
VEGFA-214ENST00000493786 PGPEP1Q9NXJ5 209 aa5.01□□□□□ -1.61
VEGFA-214ENST00000493786 GVQW2A0A096LPI5 108 aaPredicted RBP5□□□□□ -1.61
VEGFA-214ENST00000493786 TRAV16A0A0A6YYK6 109 aaPredicted RBP5□□□□□ -1.61
VEGFA-214ENST00000493786 C20orf202A1L168 122 aa5□□□□□ -1.61
VEGFA-214ENST00000493786 F8VRH5 84 aa5□□□□□ -1.61
VEGFA-214ENST00000493786 IGLC3P0DOY3 106 aa5□□□□□ -1.61
VEGFA-214ENST00000493786 PLNP26678 52 aa5□□□□□ -1.61
VEGFA-214ENST00000493786 COX6A2Q02221 97 aa5□□□□□ -1.61
VEGFA-214ENST00000493786 SPAG11BQ08648 103 aa5□□□□□ -1.61
VEGFA-214ENST00000493786 TMEM170BQ5T4T1 132 aa5□□□□□ -1.61
VEGFA-214ENST00000493786 LINC01561Q8N1V8 128 aa5□□□□□ -1.61
VEGFA-214ENST00000493786 C15orf56Q8N910 161 aa5□□□□□ -1.61
VEGFA-214ENST00000493786 ORAOV1Q8WV07 137 aa5□□□□□ -1.61
VEGFA-214ENST00000493786 DNAH17Q9UFH2 4485 aa5□□□□□ -1.61
VEGFA-214ENST00000493786 IGLV4-69A0A075B6H9 119 aa4.99□□□□□ -1.61
VEGFA-214ENST00000493786 IGHV3-64A0A075B6Q5 118 aa4.99□□□□□ -1.61
VEGFA-214ENST00000493786 PCP4L1A6NKN8 68 aa4.99□□□□□ -1.61
VEGFA-214ENST00000493786 KRTDAPP60985 99 aa4.99□□□□□ -1.61
VEGFA-214ENST00000493786 SNRPEP62304 92 aaKnown RBP4.99□□□□□ -1.61
VEGFA-214ENST00000493786 C4orf48Q5BLP8 95 aa4.99□□□□□ -1.61
VEGFA-214ENST00000493786 HIST3H2BBQ8N257 126 aa4.99□□□□□ -1.61
VEGFA-214ENST00000493786 MRPL35Q9NZE8 188 aaKnown RBP4.99□□□□□ -1.61
VEGFA-214ENST00000493786 TOMM7Q9P0U1 55 aa4.99□□□□□ -1.61
VEGFA-214ENST00000493786 CDKN2A-AS1Q9UH64 79 aa4.99□□□□□ -1.61
VEGFA-214ENST00000493786 IGLV5-45A0A087WSX0 123 aa4.98□□□□□ -1.61
VEGFA-214ENST00000493786 A0A1B0GVY2 172 aa4.98□□□□□ -1.61
VEGFA-214ENST00000493786 C11orf86A6NJI1 115 aa4.98□□□□□ -1.61
VEGFA-214ENST00000493786 C16orf90A8MZG2 172 aa4.98□□□□□ -1.61
VEGFA-214ENST00000493786 F8WDY8 70 aa4.98□□□□□ -1.61
VEGFA-214ENST00000493786 SYS1-DBNDD2H3BUS1 97 aa4.98□□□□□ -1.61
VEGFA-214ENST00000493786 DPM2O94777 84 aa4.98□□□□□ -1.61
VEGFA-214ENST00000493786 ZNF22P17026 224 aaPredicted RBP4.98□□□□□ -1.61
VEGFA-214ENST00000493786 HERVK_113P61574 105 aa4.98□□□□□ -1.61
VEGFA-214ENST00000493786 ODF1Q14990 250 aa4.98□□□□□ -1.61
VEGFA-214ENST00000493786 PET117Q6UWS5 81 aa4.98□□□□□ -1.61
VEGFA-214ENST00000493786 CAMK2N2Q96S95 79 aa4.98□□□□□ -1.61
VEGFA-214ENST00000493786 PKIGQ9Y2B9 76 aa4.98□□□□□ -1.61
VEGFA-214ENST00000493786 SMIM1B2RUZ4 78 aa4.97□□□□□ -1.61
VEGFA-214ENST00000493786 NDUFA1O15239 70 aa4.97□□□□□ -1.61
VEGFA-214ENST00000493786 IGKCP01834 107 aa4.97□□□□□ -1.61
VEGFA-214ENST00000493786 SPINK8P0C7L1 97 aa4.97□□□□□ -1.61
VEGFA-214ENST00000493786 C3orf79P0CE67 100 aa4.97□□□□□ -1.61
VEGFA-214ENST00000493786 AKR1D1P51857 326 aa4.97□□□□□ -1.61
VEGFA-214ENST00000493786 KRTAP10-2P60368 255 aa4.97□□□□□ -1.61
VEGFA-214ENST00000493786 CKS1BP61024 79 aa4.97□□□□□ -1.61
VEGFA-214ENST00000493786 CNBPP62633 177 aaKnown RBP4.97□□□□□ -1.61
VEGFA-214ENST00000493786 SYCNQ0VAF6 134 aa4.97□□□□□ -1.61
VEGFA-214ENST00000493786 C6orf226Q5I0X4 101 aa4.97□□□□□ -1.61
VEGFA-214ENST00000493786 Q8IZM0 81 aa4.97□□□□□ -1.61
VEGFA-214ENST00000493786 C2orf48Q96LS8 159 aa4.97□□□□□ -1.61
VEGFA-214ENST00000493786 CARD19Q96LW7 228 aa4.97□□□□□ -1.61
VEGFA-214ENST00000493786 HIST1H2BLQ99880 126 aa4.97□□□□□ -1.61
VEGFA-214ENST00000493786 C5orf52A6NGY3 159 aa4.96□□□□□ -1.62
VEGFA-214ENST00000493786 GCSHP23434 173 aa4.96□□□□□ -1.62
VEGFA-214ENST00000493786 FUSP35637 526 aaKnown RBP eCLIP4.96□□□□□ -1.629e-8■■□□□ 12.6
VEGFA-214ENST00000493786 CXCL5P42830 114 aa4.96□□□□□ -1.62
VEGFA-214ENST00000493786 COX7B2Q8TF08 81 aa4.96□□□□□ -1.62
VEGFA-214ENST00000493786 LINC00526Q96FQ7 95 aa4.96□□□□□ -1.62
VEGFA-214ENST00000493786 PMCHL2Q9BQD1 86 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms