RNA–Protein interactions for RNA: ENST00000493736.5

SORT1-207, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-207ENST00000493736 GTSF1LQ9H1H1 148 aa3.4□□□□□ -1.87
SORT1-207ENST00000493736 IGLV2-18A0A075B6J9 118 aa3.39□□□□□ -1.87
SORT1-207ENST00000493736 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.39□□□□□ -1.87
SORT1-207ENST00000493736 A0A087WX48 190 aa3.39□□□□□ -1.87
SORT1-207ENST00000493736 TRBV6-8A0A0A6YYG3 113 aa3.39□□□□□ -1.87
SORT1-207ENST00000493736 IGKV2-29A2NJV5 120 aaPredicted RBP3.39□□□□□ -1.87
SORT1-207ENST00000493736 LINC01546A6NGU7 62 aa3.39□□□□□ -1.87
SORT1-207ENST00000493736 TMEM262E9PQX1 116 aa3.39□□□□□ -1.87
SORT1-207ENST00000493736 OR10D4PQ8NGN7 298 aa3.39□□□□□ -1.87
SORT1-207ENST00000493736 DEFB104AQ8WTQ1 72 aa3.39□□□□□ -1.87
SORT1-207ENST00000493736 TOMM6Q96B49 74 aa3.39□□□□□ -1.87
SORT1-207ENST00000493736 IFI27L1Q96BM0 104 aa3.39□□□□□ -1.87
SORT1-207ENST00000493736 TMEM141Q96I45 108 aa3.39□□□□□ -1.87
SORT1-207ENST00000493736 VSIG2Q96IQ7 327 aa3.39□□□□□ -1.87
SORT1-207ENST00000493736 HIST1H2BLQ99880 126 aa3.39□□□□□ -1.87
SORT1-207ENST00000493736 C2orf88Q9BSF0 95 aa3.39□□□□□ -1.87
SORT1-207ENST00000493736 SPANXA1Q9NS26 97 aa3.39□□□□□ -1.87
SORT1-207ENST00000493736 NUPR1O60356 82 aa3.38□□□□□ -1.87
SORT1-207ENST00000493736 ZNF25P17030 456 aaPredicted RBP3.38□□□□□ -1.87
SORT1-207ENST00000493736 CCL18P55774 89 aa3.38□□□□□ -1.87
SORT1-207ENST00000493736 LELP1Q5T871 98 aa3.38□□□□□ -1.87
SORT1-207ENST00000493736 TEX43Q6ZNM6 134 aa3.38□□□□□ -1.87
SORT1-207ENST00000493736 ERASQ7Z444 233 aa3.38□□□□□ -1.87
SORT1-207ENST00000493736 UBE2DNLQ8IWF7 75 aa3.38□□□□□ -1.87
SORT1-207ENST00000493736 C20orf203Q8NBC4 194 aa3.38□□□□□ -1.87
SORT1-207ENST00000493736 OR5A1Q8NGJ0 315 aa3.38□□□□□ -1.87
SORT1-207ENST00000493736 TIMM17AQ99595 171 aa3.38□□□□□ -1.87
SORT1-207ENST00000493736 Q9UF83 564 aa3.38□□□□□ -1.87
SORT1-207ENST00000493736 HSBP1L1C9JCN9 74 aa3.37□□□□□ -1.87
SORT1-207ENST00000493736 LINC00694P0DN24 101 aa3.37□□□□□ -1.87
SORT1-207ENST00000493736 FGF6P10767 208 aa3.37□□□□□ -1.87
SORT1-207ENST00000493736 TCTAP57738 103 aa3.37□□□□□ -1.87
SORT1-207ENST00000493736 RPL39P62891 51 aaKnown RBP3.37□□□□□ -1.87
SORT1-207ENST00000493736 CEMP1Q6PRD7 247 aaPredicted RBP3.37□□□□□ -1.87
SORT1-207ENST00000493736 PET117Q6UWS5 81 aa3.37□□□□□ -1.87
SORT1-207ENST00000493736 C2orf48Q96LS8 159 aa3.37□□□□□ -1.87
SORT1-207ENST00000493736 TIMM21Q9BVV7 248 aa3.37□□□□□ -1.87
SORT1-207ENST00000493736 VCX2Q9H322 139 aa3.37□□□□□ -1.87
SORT1-207ENST00000493736 MGAM2Q2M2H8 2515 aa3.37□□□□□ -1.87
SORT1-207ENST00000493736 A0A096LNJ9 63 aa3.36□□□□□ -1.87
SORT1-207ENST00000493736 SYS1-DBNDD2H3BUS1 97 aa3.36□□□□□ -1.87
SORT1-207ENST00000493736 CRPP02741 224 aa3.36□□□□□ -1.87
SORT1-207ENST00000493736 ANGP03950 147 aaKnown RBP3.36□□□□□ -1.87
SORT1-207ENST00000493736 KRTAP1-4P0C5Y4 121 aa3.36□□□□□ -1.87
SORT1-207ENST00000493736 C3orf79P0CE67 100 aa3.36□□□□□ -1.87
SORT1-207ENST00000493736 S100A12P80511 92 aa3.36□□□□□ -1.87
SORT1-207ENST00000493736 PMVKQ15126 192 aa3.36□□□□□ -1.87
SORT1-207ENST00000493736 LYPD5Q6UWN5 251 aa3.36□□□□□ -1.87
SORT1-207ENST00000493736 NTM-AS1Q6ZSK4 140 aa3.36□□□□□ -1.87
SORT1-207ENST00000493736 MRPL52Q86TS9 123 aaKnown RBP3.36□□□□□ -1.87
SORT1-207ENST00000493736 CHCHD7Q9BUK0 85 aa3.36□□□□□ -1.87
SORT1-207ENST00000493736 UBE2D4Q9Y2X8 147 aa3.36□□□□□ -1.87
SORT1-207ENST00000493736 CHTOPQ9Y3Y2 248 aaKnown RBP3.36□□□□□ -1.87
SORT1-207ENST00000493736 IGLV4-3A0A075B6K6 122 aa3.35□□□□□ -1.87
SORT1-207ENST00000493736 TRAV9-2A0A087WT02 112 aa3.35□□□□□ -1.87
SORT1-207ENST00000493736 TRAV12-1A0A0B4J245 112 aa3.35□□□□□ -1.87
SORT1-207ENST00000493736 IGKV3OR2-268A0A0C4DH90 116 aa3.35□□□□□ -1.87
SORT1-207ENST00000493736 LOC105371267A0A1B0GV96 52 aa3.35□□□□□ -1.87
SORT1-207ENST00000493736 DPM2O94777 84 aa3.35□□□□□ -1.87
SORT1-207ENST00000493736 SMIM6P0DI80 62 aa3.35□□□□□ -1.87
SORT1-207ENST00000493736 PLNP26678 52 aa3.35□□□□□ -1.87
SORT1-207ENST00000493736 HERVK_113P61574 105 aa3.35□□□□□ -1.87
SORT1-207ENST00000493736 SEC11AP67812 179 aa3.35□□□□□ -1.87
SORT1-207ENST00000493736 MRPS36P82909 103 aaKnown RBP3.35□□□□□ -1.87
SORT1-207ENST00000493736 KRTAP13-3Q3SY46 172 aa3.35□□□□□ -1.87
SORT1-207ENST00000493736 LGALS9CQ6DKI2 356 aa3.35□□□□□ -1.87
SORT1-207ENST00000493736 ZFAND6Q6FIF0 208 aa3.35□□□□□ -1.87
SORT1-207ENST00000493736 Q6ZUT4 128 aa3.35□□□□□ -1.87
SORT1-207ENST00000493736 LINC00173Q6ZV60 143 aa3.35□□□□□ -1.87
SORT1-207ENST00000493736 MUC7Q8TAX7 377 aa3.35□□□□□ -1.87
SORT1-207ENST00000493736 BAALCQ8WXS3 180 aa3.35□□□□□ -1.87
SORT1-207ENST00000493736 FAM218AQ96MZ4 157 aa3.35□□□□□ -1.87
SORT1-207ENST00000493736 GEMIN7Q9H840 131 aaKnown RBP3.35□□□□□ -1.87
SORT1-207ENST00000493736 CSDC2Q9Y534 153 aaKnown RBP3.35□□□□□ -1.87
SORT1-207ENST00000493736 TRAV13-1A0A0B4J241 112 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 IGIPA6NJ69 53 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 F8VRH5 84 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 H3BRM9 83 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 SIVA1O15304 175 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 IGHV3-30P01768 117 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 IGHV3-33P01772 117 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 IGKCP01834 107 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 IGHV3-30-3P0DP02 117 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 IGHV3-30-5P0DP03 117 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 RBX1P62877 108 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 JOSD1Q15040 202 aaPredicted RBP3.34□□□□□ -1.87
SORT1-207ENST00000493736 SS18Q15532 418 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 ESRGQ1W209 222 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 MPV17L2Q567V2 206 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 RNASE13Q5GAN3 156 aaKnown RBP3.34□□□□□ -1.87
SORT1-207ENST00000493736 TMEM170BQ5T4T1 132 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 SPATA12Q7Z6I5 190 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 ZNF664Q8N3J9 261 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 C10orf126Q8N4M7 172 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 VAMP8Q9BV40 100 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 Q9H8V8 135 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 MRPS16Q9Y3D3 137 aaKnown RBP3.34□□□□□ -1.87
SORT1-207ENST00000493736 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
SORT1-207ENST00000493736 NACAE9PAV3 2078 aa3.34□□□□□ -1.88
SORT1-207ENST00000493736 PKD1L1Q8TDX9 2849 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms