RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 PKIGQ9Y2B9 76 aa5.36□□□□□ -1.55
TM4SF1-204ENST00000493348 PKHD1P08F94 4074 aa5.35□□□□□ -1.55
TM4SF1-204ENST00000493348 HSBP1O75506 76 aa5.35□□□□□ -1.55
TM4SF1-204ENST00000493348 FUSP35637 526 aaKnown RBP eCLIP5.35□□□□□ -1.55
TM4SF1-204ENST00000493348 FOXI1Q12951 378 aa5.35□□□□□ -1.55
TM4SF1-204ENST00000493348 WFDC2Q14508 124 aa5.35□□□□□ -1.55
TM4SF1-204ENST00000493348 HIGD2BQ4VC39 106 aa5.35□□□□□ -1.55
TM4SF1-204ENST00000493348 C5orf38Q86SI9 138 aa5.35□□□□□ -1.55
TM4SF1-204ENST00000493348 CHCHD1Q96BP2 118 aaKnown RBP5.35□□□□□ -1.55
TM4SF1-204ENST00000493348 YPEL4Q96NS1 127 aa5.35□□□□□ -1.55
TM4SF1-204ENST00000493348 GEMIN7Q9H840 131 aaKnown RBP5.35□□□□□ -1.55
TM4SF1-204ENST00000493348 LINC01546A6NGU7 62 aa5.34□□□□□ -1.55
TM4SF1-204ENST00000493348 SCO1O75880 301 aa5.34□□□□□ -1.55
TM4SF1-204ENST00000493348 ATP5LO75964 103 aa5.34□□□□□ -1.55
TM4SF1-204ENST00000493348 PRSS1P07477 247 aa5.34□□□□□ -1.55
TM4SF1-204ENST00000493348 HERVK_113P63121 156 aa5.34□□□□□ -1.55
TM4SF1-204ENST00000493348 PACRGQ96M98 296 aaPredicted RBP5.34□□□□□ -1.55
TM4SF1-204ENST00000493348 IGIPA6NJ69 53 aa5.33□□□□□ -1.56
TM4SF1-204ENST00000493348 COLCA2A8K830 154 aa5.33□□□□□ -1.56
TM4SF1-204ENST00000493348 PRSS2P07478 247 aa5.33□□□□□ -1.56
TM4SF1-204ENST00000493348 PMVKQ15126 192 aa5.33□□□□□ -1.56
TM4SF1-204ENST00000493348 KRTAP26-1Q6PEX3 210 aa5.33□□□□□ -1.56
TM4SF1-204ENST00000493348 DPH3Q96FX2 82 aa5.33□□□□□ -1.56
TM4SF1-204ENST00000493348 AMELXQ99217 191 aa5.33□□□□□ -1.56
TM4SF1-204ENST00000493348 IGHV3-64A0A075B6Q5 118 aa5.32□□□□□ -1.56
TM4SF1-204ENST00000493348 GVQW2A0A096LPI5 108 aaPredicted RBP5.32□□□□□ -1.56
TM4SF1-204ENST00000493348 ATP6V1G1O75348 118 aa5.32□□□□□ -1.56
TM4SF1-204ENST00000493348 UBE2D1P51668 147 aa5.32□□□□□ -1.56
TM4SF1-204ENST00000493348 PMCHL1Q16048 86 aa5.32□□□□□ -1.56
TM4SF1-204ENST00000493348 C15orf56Q8N910 161 aa5.32□□□□□ -1.56
TM4SF1-204ENST00000493348 OR10D4PQ8NGN7 298 aa5.32□□□□□ -1.56
TM4SF1-204ENST00000493348 ORAOV1Q8WV07 137 aa5.32□□□□□ -1.56
TM4SF1-204ENST00000493348 CAMK2N2Q96S95 79 aa5.32□□□□□ -1.56
TM4SF1-204ENST00000493348 DNAH5Q8TE73 4624 aa5.32□□□□□ -1.56
TM4SF1-204ENST00000493348 TMEM238LA0A1B0GVL6 79 aa5.31□□□□□ -1.56
TM4SF1-204ENST00000493348 H3BRM9 83 aa5.31□□□□□ -1.56
TM4SF1-204ENST00000493348 CDK2AP2O75956 126 aa5.31□□□□□ -1.56
TM4SF1-204ENST00000493348 CNBPP62633 177 aaKnown RBP5.31□□□□□ -1.56
TM4SF1-204ENST00000493348 SPAG11BQ08648 103 aa5.31□□□□□ -1.56
TM4SF1-204ENST00000493348 LINC00242Q5T6M2 205 aa5.31□□□□□ -1.56
TM4SF1-204ENST00000493348 ZC2HC1BQ5TFG8 222 aa5.31□□□□□ -1.56
TM4SF1-204ENST00000493348 LINC00469Q8N7U9 141 aa5.31□□□□□ -1.56
TM4SF1-204ENST00000493348 CARD19Q96LW7 228 aa5.31□□□□□ -1.56
TM4SF1-204ENST00000493348 DYNC1H1Q14204 4646 aaKnown RBP5.31□□□□□ -1.56
TM4SF1-204ENST00000493348 BIRC6Q9NR09 4857 aa5.3□□□□□ -1.56
TM4SF1-204ENST00000493348 A0A087WZ39 114 aa5.3□□□□□ -1.56
TM4SF1-204ENST00000493348 IGHV3OR16-9A0A0B4J2B5 98 aa5.3□□□□□ -1.56
TM4SF1-204ENST00000493348 TINCRA0A1B0GVN0 87 aa5.3□□□□□ -1.56
TM4SF1-204ENST00000493348 F8WDY8 70 aa5.3□□□□□ -1.56
TM4SF1-204ENST00000493348 LEPROTL1O95214 131 aa5.3□□□□□ -1.56
TM4SF1-204ENST00000493348 GHRHP01286 108 aa5.3□□□□□ -1.56
TM4SF1-204ENST00000493348 KRTAP10-1P60331 282 aa5.3□□□□□ -1.56
TM4SF1-204ENST00000493348 SYCNQ0VAF6 134 aa5.3□□□□□ -1.56
TM4SF1-204ENST00000493348 C9orf163Q8N9P6 203 aa5.3□□□□□ -1.56
TM4SF1-204ENST00000493348 KRTAP9-9Q9BYP9 154 aa5.3□□□□□ -1.56
TM4SF1-204ENST00000493348 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
TM4SF1-204ENST00000493348 CST9LQ9H4G1 147 aa5.3□□□□□ -1.56
TM4SF1-204ENST00000493348 TOMM7Q9P0U1 55 aa5.3□□□□□ -1.56
TM4SF1-204ENST00000493348 IGLV4-69A0A075B6H9 119 aa5.29□□□□□ -1.56
TM4SF1-204ENST00000493348 A0A0J9YXV3 536 aa5.29□□□□□ -1.56
TM4SF1-204ENST00000493348 H0Y8G0 127 aa5.29□□□□□ -1.56
TM4SF1-204ENST00000493348 NDUFA1O15239 70 aa5.29□□□□□ -1.56
TM4SF1-204ENST00000493348 SERF1AO75920 110 aa5.29□□□□□ -1.56
TM4SF1-204ENST00000493348 CKS1BP61024 79 aa5.29□□□□□ -1.56
TM4SF1-204ENST00000493348 LINC01620Q4KN68 170 aa5.29□□□□□ -1.56
TM4SF1-204ENST00000493348 C6orf226Q5I0X4 101 aa5.29□□□□□ -1.56
TM4SF1-204ENST00000493348 LINC00173Q6ZV60 143 aa5.29□□□□□ -1.56
TM4SF1-204ENST00000493348 LINC01561Q8N1V8 128 aa5.29□□□□□ -1.56
TM4SF1-204ENST00000493348 FAM104AQ969W3 186 aa5.29□□□□□ -1.56
TM4SF1-204ENST00000493348 IFI27L1Q96BM0 104 aa5.29□□□□□ -1.56
TM4SF1-204ENST00000493348 URB1-AS1Q96HZ7 61 aa5.29□□□□□ -1.56
TM4SF1-204ENST00000493348 C2orf48Q96LS8 159 aa5.29□□□□□ -1.56
TM4SF1-204ENST00000493348 HSPB8Q9UJY1 196 aa5.29□□□□□ -1.56
TM4SF1-204ENST00000493348 LRP1BQ9NZR2 4599 aa5.28□□□□□ -1.56
TM4SF1-204ENST00000493348 COX6A2Q02221 97 aa5.28□□□□□ -1.56
TM4SF1-204ENST00000493348 PDZD11Q5EBL8 140 aa5.28□□□□□ -1.56
TM4SF1-204ENST00000493348 FAM19A3Q7Z5A8 133 aa5.28□□□□□ -1.56
TM4SF1-204ENST00000493348 FAM19A2Q8N3H0 131 aa5.28□□□□□ -1.56
TM4SF1-204ENST00000493348 LINC00526Q96FQ7 95 aa5.28□□□□□ -1.56
TM4SF1-204ENST00000493348 CHAC1Q9BUX1 264 aa5.28□□□□□ -1.56
TM4SF1-204ENST00000493348 LINC00474Q9P2X8 69 aa5.28□□□□□ -1.56
TM4SF1-204ENST00000493348 CHTOPQ9Y3Y2 248 aaKnown RBP5.28□□□□□ -1.56
TM4SF1-204ENST00000493348 A0A096LNJ9 63 aa5.27□□□□□ -1.57
TM4SF1-204ENST00000493348 LOC107984640A0A0U1RRK4 108 aa5.27□□□□□ -1.57
TM4SF1-204ENST00000493348 FABP4P15090 132 aa5.27□□□□□ -1.57
TM4SF1-204ENST00000493348 RPL18AQ02543 176 aaKnown RBP5.27□□□□□ -1.57
TM4SF1-204ENST00000493348 TMEM170BQ5T4T1 132 aa5.27□□□□□ -1.57
TM4SF1-204ENST00000493348 CDKN2A-AS1Q9UH64 79 aa5.27□□□□□ -1.57
TM4SF1-204ENST00000493348 TRAV12-1A0A0B4J245 112 aa5.26□□□□□ -1.57
TM4SF1-204ENST00000493348 IGKV2-24A0A0C4DH68 120 aa5.26□□□□□ -1.57
TM4SF1-204ENST00000493348 FAM229AH3BQW9 127 aa5.26□□□□□ -1.57
TM4SF1-204ENST00000493348 HIST1H2BKO60814 126 aa5.26□□□□□ -1.57
TM4SF1-204ENST00000493348 HIST1H2BJP06899 126 aa5.26□□□□□ -1.57
TM4SF1-204ENST00000493348 IGLC3P0DOY3 106 aa5.26□□□□□ -1.57
TM4SF1-204ENST00000493348 HIST1H2BOP23527 126 aa5.26□□□□□ -1.57
TM4SF1-204ENST00000493348 HIST1H2BBP33778 126 aa5.26□□□□□ -1.57
TM4SF1-204ENST00000493348 CXCL5P42830 114 aa5.26□□□□□ -1.57
TM4SF1-204ENST00000493348 HIST1H2BDP58876 126 aa5.26□□□□□ -1.57
TM4SF1-204ENST00000493348 HIST1H2BCP62807 126 aa5.26□□□□□ -1.57
TM4SF1-204ENST00000493348 HIST2H2BEQ16778 126 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms