RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 WDR7Q9Y4E6 1490 aa0□□□□□ -2.41
CLK1-213ENST00000492793 ABCA2Q9BZC7 2435 aa-0.01□□□□□ -2.41
CLK1-213ENST00000492793 DOPEY2Q9Y3R5 2298 aa-0.01□□□□□ -2.41
CLK1-213ENST00000492793 TRBV6-1A0A0K0K1D8 114 aa-0.01□□□□□ -2.41
CLK1-213ENST00000492793 C20orf202A1L168 122 aa-0.01□□□□□ -2.41
CLK1-213ENST00000492793 NAP1L6A6NFF2 107 aa-0.01□□□□□ -2.41
CLK1-213ENST00000492793 H3BQ15 152 aa-0.01□□□□□ -2.41
CLK1-213ENST00000492793 SPRR1AP35321 89 aa-0.01□□□□□ -2.41
CLK1-213ENST00000492793 HSD52Q0P140 79 aa-0.01□□□□□ -2.41
CLK1-213ENST00000492793 WHAMMP3Q1A5X7 153 aa-0.01□□□□□ -2.41
CLK1-213ENST00000492793 BTAF1O14981 1849 aa-0.01□□□□□ -2.41
CLK1-213ENST00000492793 KDM5AP29375 1690 aaKnown RBP-0.02□□□□□ -2.41
CLK1-213ENST00000492793 RAPGEF6Q8TEU7 1601 aa-0.02□□□□□ -2.41
CLK1-213ENST00000492793 MAPKBP1O60336 1514 aa-0.02□□□□□ -2.41
CLK1-213ENST00000492793 TCHHQ07283 1943 aa-0.02□□□□□ -2.41
CLK1-213ENST00000492793 FXYD6-FXYD2A0A087WZ82 144 aa-0.02□□□□□ -2.41
CLK1-213ENST00000492793 TRAPPC2P0DI81 140 aa-0.02□□□□□ -2.41
CLK1-213ENST00000492793 TRAPPC2BP0DI82 140 aa-0.02□□□□□ -2.41
CLK1-213ENST00000492793 UBA52P62987 128 aaKnown RBP-0.02□□□□□ -2.41
CLK1-213ENST00000492793 PIGYQ3MUY2 71 aa-0.02□□□□□ -2.41
CLK1-213ENST00000492793 C10orf113Q5VZT2 155 aa-0.02□□□□□ -2.41
CLK1-213ENST00000492793 PRO1854Q9UHT4 67 aa-0.02□□□□□ -2.41
CLK1-213ENST00000492793 ANKRD17O75179 2603 aaKnown RBP-0.02□□□□□ -2.41
CLK1-213ENST00000492793 NRKQ7Z2Y5 1582 aa-0.02□□□□□ -2.41
CLK1-213ENST00000492793 hADV29S1A0JD25 119 aa-0.03□□□□□ -2.41
CLK1-213ENST00000492793 TMEM262E9PQX1 116 aa-0.03□□□□□ -2.41
CLK1-213ENST00000492793 COX6CP09669 75 aa-0.03□□□□□ -2.41
CLK1-213ENST00000492793 S100PP25815 95 aa-0.03□□□□□ -2.41
CLK1-213ENST00000492793 TET3O43151 1660 aa-0.03□□□□□ -2.41
CLK1-213ENST00000492793 ZFHX3Q15911 3703 aa-0.03□□□□□ -2.41
CLK1-213ENST00000492793 NCOR1O75376 2440 aa-0.03□□□□□ -2.41
CLK1-213ENST00000492793 SPTBN1Q01082 2364 aaKnown RBP-0.03□□□□□ -2.41
CLK1-213ENST00000492793 ARHGAP5Q13017 1502 aa-0.03□□□□□ -2.41
CLK1-213ENST00000492793 PPRC1Q5VV67 1664 aaKnown RBP-0.04□□□□□ -2.42
CLK1-213ENST00000492793 PAPPAQ13219 1627 aa-0.04□□□□□ -2.42
CLK1-213ENST00000492793 CRYM-AS1A6NIL9 109 aa-0.04□□□□□ -2.42
CLK1-213ENST00000492793 FAM223BA6NKX1 122 aa-0.04□□□□□ -2.42
CLK1-213ENST00000492793 EHBP1L1Q8N3D4 1523 aa-0.04□□□□□ -2.42
CLK1-213ENST00000492793 FAM135AQ9P2D6 1515 aa-0.04□□□□□ -2.42
CLK1-213ENST00000492793 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.04□□□□□ -2.42
CLK1-213ENST00000492793 KRTDAPP60985 99 aa-0.05□□□□□ -2.42
CLK1-213ENST00000492793 DEFB123Q8N688 67 aa-0.05□□□□□ -2.42
CLK1-213ENST00000492793 LCN9Q8WX39 176 aa-0.05□□□□□ -2.42
CLK1-213ENST00000492793 C14orf144Q96I85 54 aa-0.05□□□□□ -2.42
CLK1-213ENST00000492793 C12orf57Q99622 126 aa-0.05□□□□□ -2.42
CLK1-213ENST00000492793 SPHKAPQ2M3C7 1700 aa-0.05□□□□□ -2.42
CLK1-213ENST00000492793 ADGRL2O95490 1459 aa-0.05□□□□□ -2.42
CLK1-213ENST00000492793 POLA1P09884 1462 aaPredicted RBP-0.05□□□□□ -2.42
CLK1-213ENST00000492793 ARHGEF12Q9NZN5 1544 aa-0.06□□□□□ -2.42
CLK1-213ENST00000492793 A0A1B0GWA3 101 aa-0.06□□□□□ -2.42
CLK1-213ENST00000492793 SEC11AP67812 179 aa-0.06□□□□□ -2.42
CLK1-213ENST00000492793 FDCSPQ8NFU4 85 aa-0.06□□□□□ -2.42
CLK1-213ENST00000492793 LINC01600Q96MT4 127 aa-0.06□□□□□ -2.42
CLK1-213ENST00000492793 CGREF1Q99674 301 aa-0.06□□□□□ -2.42
CLK1-213ENST00000492793 ABCC5O15440 1437 aa-0.06□□□□□ -2.42
CLK1-213ENST00000492793 LINC00959A0A1B0GUT2 108 aa-0.07□□□□□ -2.42
CLK1-213ENST00000492793 SAA2P0DJI9 122 aaPredicted RBP-0.07□□□□□ -2.42
CLK1-213ENST00000492793 COX6B1P14854 86 aa-0.07□□□□□ -2.42
CLK1-213ENST00000492793 SPRR1BP22528 89 aa-0.07□□□□□ -2.42
CLK1-213ENST00000492793 CACNA1AO00555 2505 aa-0.07□□□□□ -2.42
CLK1-213ENST00000492793 FAT2Q9NYQ8 4349 aa-0.07□□□□□ -2.42
CLK1-213ENST00000492793 LPAP08519 4548 aa-0.07□□□□□ -2.42
CLK1-213ENST00000492793 TULP4Q9NRJ4 1543 aa-0.08□□□□□ -2.42
CLK1-213ENST00000492793 KMT2AQ03164 3969 aa-0.08□□□□□ -2.42
CLK1-213ENST00000492793 MYCBP2O75592 4640 aa-0.08□□□□□ -2.42
CLK1-213ENST00000492793 MAGI1Q96QZ7 1491 aaPredicted RBP-0.08□□□□□ -2.42
CLK1-213ENST00000492793 CC2D2AQ9P2K1 1620 aa-0.08□□□□□ -2.42
CLK1-213ENST00000492793 TRBV7-4A0A0J9YYF1 115 aa-0.08□□□□□ -2.42
CLK1-213ENST00000492793 TMEM218A2RU14 115 aa-0.08□□□□□ -2.42
CLK1-213ENST00000492793 ATP6V1G2-DDX39BF2Z307 99 aa-0.08□□□□□ -2.42
CLK1-213ENST00000492793 GNGT2O14610 69 aa-0.08□□□□□ -2.42
CLK1-213ENST00000492793 PRO1933Q9H354 126 aa-0.08□□□□□ -2.42
CLK1-213ENST00000492793 DIP2CQ9Y2E4 1556 aa-0.08□□□□□ -2.42
CLK1-213ENST00000492793 VWFP04275 2813 aa-0.08□□□□□ -2.42
CLK1-213ENST00000492793 PTPN13Q12923 2485 aa-0.08□□□□□ -2.42
CLK1-213ENST00000492793 ZFYVE16Q7Z3T8 1539 aa-0.08□□□□□ -2.42
CLK1-213ENST00000492793 GVINP1Q7Z2Y8 2422 aa-0.08□□□□□ -2.42
CLK1-213ENST00000492793 MRC2Q9UBG0 1479 aa-0.09□□□□□ -2.42
CLK1-213ENST00000492793 CHD6Q8TD26 2715 aa-0.09□□□□□ -2.42
CLK1-213ENST00000492793 PRM1P04553 51 aa-0.09□□□□□ -2.42
CLK1-213ENST00000492793 TCEAL7Q9BRU2 100 aa-0.09□□□□□ -2.42
CLK1-213ENST00000492793 LINC00846Q9NV44 126 aa-0.09□□□□□ -2.42
CLK1-213ENST00000492793 BSNQ9UPA5 3926 aa-0.09□□□□□ -2.42
CLK1-213ENST00000492793 SCN7AQ01118 1682 aa-0.09□□□□□ -2.42
CLK1-213ENST00000492793 COL4A6Q14031 1691 aa-0.09□□□□□ -2.42
CLK1-213ENST00000492793 CSPG4Q6UVK1 2322 aa-0.09□□□□□ -2.42
CLK1-213ENST00000492793 TOP2BQ02880 1626 aa-0.09□□□□□ -2.42
CLK1-213ENST00000492793 C1orf167Q5SNV9 1468 aa-0.1□□□□□ -2.42
CLK1-213ENST00000492793 TRAV30A0A087WSZ9 112 aa-0.1□□□□□ -2.43
CLK1-213ENST00000492793 A0A0G2JND7 137 aa-0.1□□□□□ -2.43
CLK1-213ENST00000492793 TENM4Q6N022 2769 aa-0.1□□□□□ -2.43
CLK1-213ENST00000492793 GAPVD1Q14C86 1478 aa-0.1□□□□□ -2.43
CLK1-213ENST00000492793 HSPG2P98160 4391 aa-0.1□□□□□ -2.43
CLK1-213ENST00000492793 NEBP20929 6669 aa-0.11□□□□□ -2.43
CLK1-213ENST00000492793 A0A087WVE0 104 aa-0.11□□□□□ -2.43
CLK1-213ENST00000492793 C7orf77A4D0Y5 90 aa-0.11□□□□□ -2.43
CLK1-213ENST00000492793 K7EQZ3 153 aa-0.11□□□□□ -2.43
CLK1-213ENST00000492793 MT-ATP8P03928 68 aa-0.11□□□□□ -2.43
CLK1-213ENST00000492793 S100A10P60903 97 aa-0.11□□□□□ -2.43
CLK1-213ENST00000492793 CACFD1Q9UGQ2 172 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms