RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 LINC00526Q96FQ7 95 aa16.62■□□□□ 0.25
TTC3-223ENST00000492275 TIMM17AQ99595 171 aa16.62■□□□□ 0.25
TTC3-223ENST00000492275 KRTAP4-5Q9BYR2 181 aa16.62■□□□□ 0.25
TTC3-223ENST00000492275 VCX2Q9H322 139 aa16.62■□□□□ 0.25
TTC3-223ENST00000492275 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.61■□□□□ 0.25
TTC3-223ENST00000492275 MALP21145 153 aa16.61■□□□□ 0.25
TTC3-223ENST00000492275 UBE2D1P51668 147 aa16.61■□□□□ 0.25
TTC3-223ENST00000492275 LINC00242Q5T6M2 205 aa16.61■□□□□ 0.25
TTC3-223ENST00000492275 Q6ZN92 141 aa16.61■□□□□ 0.25
TTC3-223ENST00000492275 COX6A2Q02221 97 aa16.6■□□□□ 0.25
TTC3-223ENST00000492275 ERASQ7Z444 233 aa16.6■□□□□ 0.25
TTC3-223ENST00000492275 SCGB3A1Q96QR1 104 aa16.6■□□□□ 0.25
TTC3-223ENST00000492275 LINC00614P0C842 121 aa16.59■□□□□ 0.25
TTC3-223ENST00000492275 C2orf88Q9BSF0 95 aa16.58■□□□□ 0.24
TTC3-223ENST00000492275 IGHV3-64A0A075B6Q5 118 aa16.57■□□□□ 0.24
TTC3-223ENST00000492275 SMR3BP02814 79 aaPredicted RBP16.57■□□□□ 0.24
TTC3-223ENST00000492275 LINC01549A6NIU2 74 aa16.56■□□□□ 0.24
TTC3-223ENST00000492275 ZNF561-AS1K7EIQ3 104 aa16.56■□□□□ 0.24
TTC3-223ENST00000492275 PAPPA-AS1Q5QFB9 102 aa16.56■□□□□ 0.24
TTC3-223ENST00000492275 A0A096LNJ9 63 aa16.55■□□□□ 0.24
TTC3-223ENST00000492275 SCXQ7RTU7 201 aa16.55■□□□□ 0.24
TTC3-223ENST00000492275 CHAC1Q9BUX1 264 aa16.55■□□□□ 0.24
TTC3-223ENST00000492275 IGLV4-69A0A075B6H9 119 aa16.54■□□□□ 0.24
TTC3-223ENST00000492275 COLCA2A8K830 154 aa16.54■□□□□ 0.24
TTC3-223ENST00000492275 PANO1I0J062 215 aa16.54■□□□□ 0.24
TTC3-223ENST00000492275 APOMO95445 188 aa16.54■□□□□ 0.24
TTC3-223ENST00000492275 FAM19A3Q7Z5A8 133 aa16.54■□□□□ 0.24
TTC3-223ENST00000492275 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.54■□□□□ 0.24
TTC3-223ENST00000492275 A0A087WZ39 114 aa16.53■□□□□ 0.24
TTC3-223ENST00000492275 TRGC2P03986 189 aa16.52■□□□□ 0.24
TTC3-223ENST00000492275 CIRBP-AS1Q8TBR5 109 aa16.52■□□□□ 0.24
TTC3-223ENST00000492275 RAB5BP61020 215 aa16.51■□□□□ 0.23
TTC3-223ENST00000492275 SYCNQ0VAF6 134 aa16.51■□□□□ 0.23
TTC3-223ENST00000492275 PMCHL1Q16048 86 aa16.51■□□□□ 0.23
TTC3-223ENST00000492275 SPAG11BQ08648 103 aa16.5■□□□□ 0.23
TTC3-223ENST00000492275 OR10D4PQ8NGN7 298 aa16.5■□□□□ 0.23
TTC3-223ENST00000492275 ORAOV1Q8WV07 137 aa16.5■□□□□ 0.23
TTC3-223ENST00000492275 CARD19Q96LW7 228 aa16.5■□□□□ 0.23
TTC3-223ENST00000492275 SCO1O75880 301 aa16.49■□□□□ 0.23
TTC3-223ENST00000492275 FAT1Q14517 4588 aa16.48■□□□□ 0.23
TTC3-223ENST00000492275 CIRBPQ14011 172 aaKnown RBP16.48■□□□□ 0.23
TTC3-223ENST00000492275 Q6ZRU5 148 aa16.48■□□□□ 0.23
TTC3-223ENST00000492275 C2orf48Q96LS8 159 aa16.48■□□□□ 0.23
TTC3-223ENST00000492275 CST9LQ9H4G1 147 aa16.48■□□□□ 0.23
TTC3-223ENST00000492275 A0A0J9YXV3 536 aa16.47■□□□□ 0.23
TTC3-223ENST00000492275 EPM2AB3EWF7 344 aa16.47■□□□□ 0.23
TTC3-223ENST00000492275 HBDP02042 147 aa16.47■□□□□ 0.23
TTC3-223ENST00000492275 CHTF8P0CG12 524 aa16.47■□□□□ 0.23
TTC3-223ENST00000492275 PDZD11Q5EBL8 140 aa16.46■□□□□ 0.23
TTC3-223ENST00000492275 LINC01561Q8N1V8 128 aa16.46■□□□□ 0.23
TTC3-223ENST00000492275 CAMK2N2Q96S95 79 aa16.46■□□□□ 0.23
TTC3-223ENST00000492275 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.45■□□□□ 0.22
TTC3-223ENST00000492275 SEC11AP67812 179 aa16.45■□□□□ 0.22
TTC3-223ENST00000492275 PMVKQ15126 192 aa16.45■□□□□ 0.22
TTC3-223ENST00000492275 Q5VSD8 79 aa16.45■□□□□ 0.22
TTC3-223ENST00000492275 HERVK_113P63121 156 aa16.44■□□□□ 0.22
TTC3-223ENST00000492275 KIAA0087Q14695 138 aa16.44■□□□□ 0.22
TTC3-223ENST00000492275 CHCHD1Q96BP2 118 aaKnown RBP16.44■□□□□ 0.22
TTC3-223ENST00000492275 SPACA4Q8TDM5 124 aa16.43■□□□□ 0.22
TTC3-223ENST00000492275 GEMIN7Q9H840 131 aaKnown RBP16.43■□□□□ 0.22
TTC3-223ENST00000492275 CDKN2A-AS1Q9UH64 79 aa16.43■□□□□ 0.22
TTC3-223ENST00000492275 ABCA13Q86UQ4 5058 aa16.42■□□□□ 0.22
TTC3-223ENST00000492275 PCLOQ9Y6V0 5065 aa16.42■□□□□ 0.22
TTC3-223ENST00000492275 TINCRA0A1B0GVN0 87 aa16.41■□□□□ 0.22
TTC3-223ENST00000492275 A0A096LNI7 61 aa16.4■□□□□ 0.22
TTC3-223ENST00000492275 F8WDY8 70 aa16.4■□□□□ 0.22
TTC3-223ENST00000492275 FAM229AH3BQW9 127 aa16.4■□□□□ 0.22
TTC3-223ENST00000492275 BAGE3Q86Y29 109 aa16.4■□□□□ 0.22
TTC3-223ENST00000492275 LINC00528Q8N1L1 170 aa16.4■□□□□ 0.22
TTC3-223ENST00000492275 IGKV2-24A0A0C4DH68 120 aa16.39■□□□□ 0.21
TTC3-223ENST00000492275 C10orf25Q5T742 122 aa16.39■□□□□ 0.21
TTC3-223ENST00000492275 DPH3Q96FX2 82 aa16.39■□□□□ 0.21
TTC3-223ENST00000492275 A0A087WYN8 130 aa16.38■□□□□ 0.21
TTC3-223ENST00000492275 ATP5LO75964 103 aa16.38■□□□□ 0.21
TTC3-223ENST00000492275 RNF151Q2KHN1 245 aa16.38■□□□□ 0.21
TTC3-223ENST00000492275 UNQ6190/PRO20217Q6UXQ8 127 aa16.38■□□□□ 0.21
TTC3-223ENST00000492275 IGLV5-45A0A087WSX0 123 aa16.37■□□□□ 0.21
TTC3-223ENST00000492275 NDUFA6P56556 154 aa16.37■□□□□ 0.21
TTC3-223ENST00000492275 MRPL35Q9NZE8 188 aaKnown RBP16.37■□□□□ 0.21
TTC3-223ENST00000492275 NDUFA1O15239 70 aa16.36■□□□□ 0.21
TTC3-223ENST00000492275 LINC00310P59036 64 aa16.36■□□□□ 0.21
TTC3-223ENST00000492275 MAJINQ3KP22 176 aa16.36■□□□□ 0.21
TTC3-223ENST00000492275 LINC00469Q8N7U9 141 aa16.36■□□□□ 0.21
TTC3-223ENST00000492275 PKIGQ9Y2B9 76 aa16.36■□□□□ 0.21
TTC3-223ENST00000492275 LOC107984640A0A0U1RRK4 108 aa16.35■□□□□ 0.21
TTC3-223ENST00000492275 HSBP1O75506 76 aa16.34■□□□□ 0.21
TTC3-223ENST00000492275 FAM19A2Q8N3H0 131 aa16.34■□□□□ 0.21
TTC3-223ENST00000492275 PLAC8Q9NZF1 115 aa16.34■□□□□ 0.21
TTC3-223ENST00000492275 C6orf48Q9UBA6 75 aa16.34■□□□□ 0.21
TTC3-223ENST00000492275 VPS13BQ7Z7G8 4022 aa16.34■□□□□ 0.21
TTC3-223ENST00000492275 SERF1AO75920 110 aa16.33■□□□□ 0.2
TTC3-223ENST00000492275 IGLC3P0DOY3 106 aa16.33■□□□□ 0.2
TTC3-223ENST00000492275 C2orf82Q6UX34 121 aa16.33■□□□□ 0.2
TTC3-223ENST00000492275 PACRGQ96M98 296 aaPredicted RBP16.33■□□□□ 0.2
TTC3-223ENST00000492275 TOMM7Q9P0U1 55 aa16.33■□□□□ 0.2
TTC3-223ENST00000492275 SMIM1B2RUZ4 78 aa16.32■□□□□ 0.2
TTC3-223ENST00000492275 PTTG1IPP53801 180 aa16.32■□□□□ 0.2
TTC3-223ENST00000492275 GAGE2BQ13066 116 aa16.32■□□□□ 0.2
TTC3-223ENST00000492275 Q8IZM0 81 aa16.32■□□□□ 0.2
TTC3-223ENST00000492275 NUPR1O60356 82 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms