RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 A0A087WTM6 91 aa9.12□□□□□ -0.95
CDK9-204ENST00000491521 TRAV13-1A0A0B4J241 112 aa9.12□□□□□ -0.95
CDK9-204ENST00000491521 K7EP13 123 aa9.12□□□□□ -0.95
CDK9-204ENST00000491521 PSCAO43653 123 aa9.12□□□□□ -0.95
CDK9-204ENST00000491521 FAM104AQ969W3 186 aa9.12□□□□□ -0.95
CDK9-204ENST00000491521 CST9LQ9H4G1 147 aa9.12□□□□□ -0.95
CDK9-204ENST00000491521 IBA57-AS1B1ANH7 110 aa9.11□□□□□ -0.95
CDK9-204ENST00000491521 SS18Q15532 418 aa9.11□□□□□ -0.95
CDK9-204ENST00000491521 ENHOQ6UWT2 76 aa9.11□□□□□ -0.95
CDK9-204ENST00000491521 AMELXQ99217 191 aa9.11□□□□□ -0.95
CDK9-204ENST00000491521 PGPEP1Q9NXJ5 209 aa9.11□□□□□ -0.95
CDK9-204ENST00000491521 TRAV8-3A0A0A6YYJ7 113 aa9.1□□□□□ -0.95
CDK9-204ENST00000491521 LINC00959A0A1B0GUT2 108 aa9.1□□□□□ -0.95
CDK9-204ENST00000491521 C3orf79P0CE67 100 aa9.1□□□□□ -0.95
CDK9-204ENST00000491521 OR10D4PQ8NGN7 298 aa9.1□□□□□ -0.95
CDK9-204ENST00000491521 PRR34Q9NV39 138 aa9.1□□□□□ -0.95
CDK9-204ENST00000491521 CHTOPQ9Y3Y2 248 aaKnown RBP9.1□□□□□ -0.95
CDK9-204ENST00000491521 IGLV10-54A0A075B6I4 117 aa9.09□□□□□ -0.95
CDK9-204ENST00000491521 SYS1-DBNDD2H3BUS1 97 aa9.09□□□□□ -0.95
CDK9-204ENST00000491521 TRAV12-1A0A0B4J245 112 aa9.08□□□□□ -0.96
CDK9-204ENST00000491521 A0A0J9YXV3 536 aa9.08□□□□□ -0.96
CDK9-204ENST00000491521 UBE2D1P51668 147 aa9.08□□□□□ -0.96
CDK9-204ENST00000491521 MIAQ16674 131 aa9.08□□□□□ -0.96
CDK9-204ENST00000491521 PET117Q6UWS5 81 aa9.08□□□□□ -0.96
CDK9-204ENST00000491521 Q8N1X5 172 aa9.08□□□□□ -0.96
CDK9-204ENST00000491521 IGKV2D-24A0A075B6R9 120 aa9.07□□□□□ -0.96
CDK9-204ENST00000491521 TRAV8-4A0A0B4J246 113 aa9.07□□□□□ -0.96
CDK9-204ENST00000491521 CCL25O15444 150 aa9.07□□□□□ -0.96
CDK9-204ENST00000491521 XCL1P47992 114 aa9.07□□□□□ -0.96
CDK9-204ENST00000491521 KRTAP10-1P60331 282 aa9.07□□□□□ -0.96
CDK9-204ENST00000491521 CDPF1Q6NVV7 123 aa9.07□□□□□ -0.96
CDK9-204ENST00000491521 RMI2Q96E14 147 aa9.07□□□□□ -0.96
CDK9-204ENST00000491521 PMCHL2Q9BQD1 86 aa9.07□□□□□ -0.96
CDK9-204ENST00000491521 C1orf43Q9BWL3 253 aa9.07□□□□□ -0.96
CDK9-204ENST00000491521 GEMIN7Q9H840 131 aaKnown RBP9.07□□□□□ -0.96
CDK9-204ENST00000491521 C20orf202A1L168 122 aa9.06□□□□□ -0.96
CDK9-204ENST00000491521 SEC11AP67812 179 aa9.06□□□□□ -0.96
CDK9-204ENST00000491521 CHCHD10Q8WYQ3 142 aaPredicted RBP9.06□□□□□ -0.96
CDK9-204ENST00000491521 MRPL35Q9NZE8 188 aaKnown RBP9.06□□□□□ -0.96
CDK9-204ENST00000491521 FAT1Q14517 4588 aa9.06□□□□□ -0.96
CDK9-204ENST00000491521 GAGE12HA6NDE8 117 aa9.05□□□□□ -0.96
CDK9-204ENST00000491521 F8VRH5 84 aa9.05□□□□□ -0.96
CDK9-204ENST00000491521 AKR1D1P51857 326 aa9.05□□□□□ -0.96
CDK9-204ENST00000491521 ODF1Q14990 250 aa9.05□□□□□ -0.96
CDK9-204ENST00000491521 LINC00242Q5T6M2 205 aa9.05□□□□□ -0.96
CDK9-204ENST00000491521 IGLV5-52A0A0A0MRZ9 124 aa9.04□□□□□ -0.96
CDK9-204ENST00000491521 TINCRA0A1B0GVN0 87 aa9.04□□□□□ -0.96
CDK9-204ENST00000491521 SCGB1D1O95968 90 aa9.04□□□□□ -0.96
CDK9-204ENST00000491521 GCSHP23434 173 aa9.04□□□□□ -0.96
CDK9-204ENST00000491521 HAMPP81172 84 aa9.04□□□□□ -0.96
CDK9-204ENST00000491521 COX6A2Q02221 97 aa9.04□□□□□ -0.96
CDK9-204ENST00000491521 TM2D2Q9BX73 214 aa9.04□□□□□ -0.96
CDK9-204ENST00000491521 LRCOL1A6NCL2 159 aa9.03□□□□□ -0.96
CDK9-204ENST00000491521 DPM2O94777 84 aa9.03□□□□□ -0.96
CDK9-204ENST00000491521 HERVK_113P63121 156 aa9.03□□□□□ -0.96
CDK9-204ENST00000491521 LINC01545Q5VT33 79 aa9.03□□□□□ -0.96
CDK9-204ENST00000491521 CD164L2Q6UWJ8 174 aa9.03□□□□□ -0.96
CDK9-204ENST00000491521 CHAC1Q9BUX1 264 aa9.03□□□□□ -0.96
CDK9-204ENST00000491521 COX11Q9Y6N1 276 aa9.03□□□□□ -0.96
CDK9-204ENST00000491521 IGLV4-69A0A075B6H9 119 aa9.02□□□□□ -0.97
CDK9-204ENST00000491521 LECT2O14960 151 aa9.02□□□□□ -0.97
CDK9-204ENST00000491521 IGKCP01834 107 aa9.02□□□□□ -0.97
CDK9-204ENST00000491521 IGLC3P0DOY3 106 aa9.02□□□□□ -0.97
CDK9-204ENST00000491521 PLNP26678 52 aa9.02□□□□□ -0.97
CDK9-204ENST00000491521 XGP55808 180 aa9.02□□□□□ -0.97
CDK9-204ENST00000491521 TMEM170BQ5T4T1 132 aa9.02□□□□□ -0.97
CDK9-204ENST00000491521 FAM19A3Q7Z5A8 133 aa9.02□□□□□ -0.97
CDK9-204ENST00000491521 C5orf38Q86SI9 138 aa9.02□□□□□ -0.97
CDK9-204ENST00000491521 LINC00469Q8N7U9 141 aa9.02□□□□□ -0.97
CDK9-204ENST00000491521 C11orf86A6NJI1 115 aa9.01□□□□□ -0.97
CDK9-204ENST00000491521 EPM2AB3EWF7 344 aa9.01□□□□□ -0.97
CDK9-204ENST00000491521 MALP21145 153 aa9.01□□□□□ -0.97
CDK9-204ENST00000491521 Q8N814 137 aa9.01□□□□□ -0.97
CDK9-204ENST00000491521 COX7A2LO14548 114 aa9□□□□□ -0.97
CDK9-204ENST00000491521 FOXI1Q12951 378 aa9□□□□□ -0.97
CDK9-204ENST00000491521 CDKN2A-AS1Q9UH64 79 aa9□□□□□ -0.97
CDK9-204ENST00000491521 VPS13BQ7Z7G8 4022 aa9□□□□□ -0.97
CDK9-204ENST00000491521 IGHV3OR16-9A0A0B4J2B5 98 aa8.99□□□□□ -0.97
CDK9-204ENST00000491521 H3BRM9 83 aa8.99□□□□□ -0.97
CDK9-204ENST00000491521 SMR3BP02814 79 aaPredicted RBP8.99□□□□□ -0.97
CDK9-204ENST00000491521 WFDC2Q14508 124 aa8.99□□□□□ -0.97
CDK9-204ENST00000491521 KRTAP26-1Q6PEX3 210 aa8.99□□□□□ -0.97
CDK9-204ENST00000491521 ATOH7Q8N100 152 aa8.99□□□□□ -0.97
CDK9-204ENST00000491521 DNAH8Q96JB1 4490 aa8.99□□□□□ -0.97
CDK9-204ENST00000491521 LOC105371267A0A1B0GV96 52 aa8.98□□□□□ -0.97
CDK9-204ENST00000491521 ZNF22P17026 224 aaPredicted RBP8.98□□□□□ -0.97
CDK9-204ENST00000491521 NTN5Q8WTR8 489 aaPredicted RBP8.98□□□□□ -0.97
CDK9-204ENST00000491521 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.97□□□□□ -0.97
CDK9-204ENST00000491521 A0A087WZ39 114 aa8.97□□□□□ -0.97
CDK9-204ENST00000491521 SPINK8P0C7L1 97 aa8.97□□□□□ -0.97
CDK9-204ENST00000491521 JOSD1Q15040 202 aaPredicted RBP8.97□□□□□ -0.97
CDK9-204ENST00000491521 Q5VSD8 79 aa8.97□□□□□ -0.97
CDK9-204ENST00000491521 SRRM2Q9UQ35 2752 aaKnown RBP8.97□□□□□ -0.97
CDK9-204ENST00000491521 IGHV3-64A0A075B6Q5 118 aa8.96□□□□□ -0.98
CDK9-204ENST00000491521 IGLV5-45A0A087WSX0 123 aa8.96□□□□□ -0.98
CDK9-204ENST00000491521 APOMO95445 188 aa8.96□□□□□ -0.98
CDK9-204ENST00000491521 CFAP161Q6P656 301 aa8.96□□□□□ -0.98
CDK9-204ENST00000491521 HERC1Q15751 4861 aa8.95□□□□□ -0.98
CDK9-204ENST00000491521 HERVK_113P61574 105 aa8.95□□□□□ -0.98
CDK9-204ENST00000491521 IGHV1-58A0A0C4DH39 117 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms