RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 GAGE2AQ6NT46 116 aa5.22□□□□□ -1.57
NPHP3-208ENST00000490993 NKAPP1Q8N9T2 125 aa5.22□□□□□ -1.57
NPHP3-208ENST00000490993 LAMTOR3Q9UHA4 124 aa5.22□□□□□ -1.57
NPHP3-208ENST00000490993 VCANP13611 3396 aa5.22□□□□□ -1.57
NPHP3-208ENST00000490993 Q8IZM0 81 aa5.22□□□□□ -1.57
NPHP3-208ENST00000490993 CCDC168Q8NDH2 2452 aa5.22□□□□□ -1.57
NPHP3-208ENST00000490993 A0A087WZ39 114 aa5.21□□□□□ -1.57
NPHP3-208ENST00000490993 TRIAP1O43715 76 aa5.21□□□□□ -1.57
NPHP3-208ENST00000490993 IGLV5-45A0A087WSX0 123 aa5.21□□□□□ -1.58
NPHP3-208ENST00000490993 COX6A2Q02221 97 aa5.21□□□□□ -1.58
NPHP3-208ENST00000490993 COX17Q14061 63 aa5.21□□□□□ -1.58
NPHP3-208ENST00000490993 CLEC2BQ92478 149 aa5.21□□□□□ -1.58
NPHP3-208ENST00000490993 TRACP01848 142 aa5.21□□□□□ -1.58
NPHP3-208ENST00000490993 IL17DQ8TAD2 202 aa5.2□□□□□ -1.58
NPHP3-208ENST00000490993 USP9YO00507 2555 aaPredicted RBP5.2□□□□□ -1.58
NPHP3-208ENST00000490993 KRTAP1-1Q07627 177 aa5.2□□□□□ -1.58
NPHP3-208ENST00000490993 PKIGQ9Y2B9 76 aa5.2□□□□□ -1.58
NPHP3-208ENST00000490993 USP9XQ93008 2570 aaPredicted RBP5.2□□□□□ -1.58
NPHP3-208ENST00000490993 DEFB131BA0A096LNP1 70 aa5.2□□□□□ -1.58
NPHP3-208ENST00000490993 IGLV5-39A0A0G2JS06 123 aa5.2□□□□□ -1.58
NPHP3-208ENST00000490993 MRPL55Q7Z7F7 128 aaKnown RBP5.2□□□□□ -1.58
NPHP3-208ENST00000490993 NOTCH3Q9UM47 2321 aa5.19□□□□□ -1.58
NPHP3-208ENST00000490993 C15orf53Q8NAA6 179 aa5.19□□□□□ -1.58
NPHP3-208ENST00000490993 DPH3Q96FX2 82 aa5.19□□□□□ -1.58
NPHP3-208ENST00000490993 NTM-AS1Q6ZSK4 140 aa5.19□□□□□ -1.58
NPHP3-208ENST00000490993 MGAQ8IWI9 3026 aa5.19□□□□□ -1.58
NPHP3-208ENST00000490993 SORL1Q92673 2214 aa5.19□□□□□ -1.58
NPHP3-208ENST00000490993 LRRK2Q5S007 2527 aa5.19□□□□□ -1.58
NPHP3-208ENST00000490993 IGLV4-60A0A075B6I1 120 aa5.19□□□□□ -1.58
NPHP3-208ENST00000490993 TRAV10A0A0B4J240 114 aa5.18□□□□□ -1.58
NPHP3-208ENST00000490993 LST1O00453 97 aa5.18□□□□□ -1.58
NPHP3-208ENST00000490993 KPRPQ5T749 579 aaPredicted RBP5.18□□□□□ -1.58
NPHP3-208ENST00000490993 WNK1Q9H4A3 2382 aa5.18□□□□□ -1.58
NPHP3-208ENST00000490993 ADAMTSL4-AS1Q5T5F5 129 aa5.18□□□□□ -1.58
NPHP3-208ENST00000490993 CSNK1G2-AS1Q8NCQ2 148 aa5.18□□□□□ -1.58
NPHP3-208ENST00000490993 X6R8D5 127 aa5.18□□□□□ -1.58
NPHP3-208ENST00000490993 FAM19A3Q7Z5A8 133 aa5.17□□□□□ -1.58
NPHP3-208ENST00000490993 Q9HAA7 133 aa5.17□□□□□ -1.58
NPHP3-208ENST00000490993 JMJD7-PLA2G4BH0Y9G9 81 aa5.17□□□□□ -1.58
NPHP3-208ENST00000490993 EYSQ5T1H1 3165 aa5.17□□□□□ -1.58
NPHP3-208ENST00000490993 M0QXV9 152 aa5.17□□□□□ -1.58
NPHP3-208ENST00000490993 SBSPONQ8IVN8 264 aa5.17□□□□□ -1.58
NPHP3-208ENST00000490993 NCR3O14931 201 aa5.17□□□□□ -1.58
NPHP3-208ENST00000490993 LECT2O14960 151 aa5.17□□□□□ -1.58
NPHP3-208ENST00000490993 NACAE9PAV3 2078 aa5.16□□□□□ -1.58
NPHP3-208ENST00000490993 TMEM256-PLSCR3K7ERE1 68 aa5.16□□□□□ -1.58
NPHP3-208ENST00000490993 WFDC9Q8NEX5 89 aa5.16□□□□□ -1.58
NPHP3-208ENST00000490993 C19orf73Q9NVV2 129 aa5.16□□□□□ -1.58
NPHP3-208ENST00000490993 SONP18583 2426 aaKnown RBP5.16□□□□□ -1.58
NPHP3-208ENST00000490993 DSCR8Q96T75 97 aa5.16□□□□□ -1.58
NPHP3-208ENST00000490993 DIRC1Q969H9 104 aa5.16□□□□□ -1.58
NPHP3-208ENST00000490993 UBL5Q9BZL1 73 aa5.15□□□□□ -1.58
NPHP3-208ENST00000490993 NOTCH2Q04721 2471 aa5.15□□□□□ -1.58
NPHP3-208ENST00000490993 Q9UF83 564 aa5.15□□□□□ -1.58
NPHP3-208ENST00000490993 A0A1B0GX51 115 aa5.15□□□□□ -1.59
NPHP3-208ENST00000490993 MYO9AB2RTY4 2548 aa5.15□□□□□ -1.59
NPHP3-208ENST00000490993 WDFY4Q6ZS81 3184 aa5.15□□□□□ -1.59
NPHP3-208ENST00000490993 VPS13AQ96RL7 3174 aa5.15□□□□□ -1.59
NPHP3-208ENST00000490993 RPL18AQ02543 176 aaKnown RBP5.14□□□□□ -1.59
NPHP3-208ENST00000490993 ABCA2Q9BZC7 2435 aa5.14□□□□□ -1.59
NPHP3-208ENST00000490993 F8WDY8 70 aa5.14□□□□□ -1.59
NPHP3-208ENST00000490993 H3BNG1 76 aa5.14□□□□□ -1.59
NPHP3-208ENST00000490993 RPL28P46779 137 aaKnown RBP5.14□□□□□ -1.59
NPHP3-208ENST00000490993 AGRNO00468 2067 aa5.14□□□□□ -1.59
NPHP3-208ENST00000490993 COL6A3P12111 3177 aa5.14□□□□□ -1.59
NPHP3-208ENST00000490993 IGHV3OR16-9A0A0B4J2B5 98 aa5.14□□□□□ -1.59
NPHP3-208ENST00000490993 F8WEM9 126 aa5.14□□□□□ -1.59
NPHP3-208ENST00000490993 GIG44P09565 113 aaPredicted RBP5.14□□□□□ -1.59
NPHP3-208ENST00000490993 A0A0J9YWU9 116 aa5.14□□□□□ -1.59
NPHP3-208ENST00000490993 KLK5Q9Y337 293 aaPredicted RBP5.14□□□□□ -1.59
NPHP3-208ENST00000490993 ZFYVE26Q68DK2 2539 aa5.14□□□□□ -1.59
NPHP3-208ENST00000490993 VPREB1P12018 145 aa5.13□□□□□ -1.59
NPHP3-208ENST00000490993 PPDPFQ9H3Y8 114 aa5.13□□□□□ -1.59
NPHP3-208ENST00000490993 TEX49A0A1B0GTD5 131 aa5.13□□□□□ -1.59
NPHP3-208ENST00000490993 PDE6GP18545 87 aa5.13□□□□□ -1.59
NPHP3-208ENST00000490993 HIGD2BQ4VC39 106 aa5.13□□□□□ -1.59
NPHP3-208ENST00000490993 POLQO75417 2590 aa5.13□□□□□ -1.59
NPHP3-208ENST00000490993 NDUFC2O95298 119 aa5.13□□□□□ -1.59
NPHP3-208ENST00000490993 LYPD5Q6UWN5 251 aa5.13□□□□□ -1.59
NPHP3-208ENST00000490993 LINC00612Q8N6U2 182 aa5.13□□□□□ -1.59
NPHP3-208ENST00000490993 PLAC8L1A1L4L8 177 aa5.12□□□□□ -1.59
NPHP3-208ENST00000490993 COX7BP24311 80 aa5.12□□□□□ -1.59
NPHP3-208ENST00000490993 KRTAP10-3P60369 221 aa5.12□□□□□ -1.59
NPHP3-208ENST00000490993 SMIM11BQ8TCY0 68 aa5.12□□□□□ -1.59
NPHP3-208ENST00000490993 hADV29S1A0JD25 119 aa5.12□□□□□ -1.59
NPHP3-208ENST00000490993 C14orf177Q52M58 125 aa5.12□□□□□ -1.59
NPHP3-208ENST00000490993 CR1P17927 2039 aa5.12□□□□□ -1.59
NPHP3-208ENST00000490993 MUC4Q99102 2169 aa5.12□□□□□ -1.59
NPHP3-208ENST00000490993 HIST1H4AP62805 103 aaKnown RBP5.12□□□□□ -1.59
NPHP3-208ENST00000490993 NANOS2P60321 138 aaKnown RBP5.11□□□□□ -1.59
NPHP3-208ENST00000490993 SYCNQ0VAF6 134 aa5.11□□□□□ -1.59
NPHP3-208ENST00000490993 Q8NAQ8 132 aa5.11□□□□□ -1.59
NPHP3-208ENST00000490993 CELA1Q9UNI1 258 aa5.11□□□□□ -1.59
NPHP3-208ENST00000490993 ETDCA0A1B0GVM5 59 aa5.11□□□□□ -1.59
NPHP3-208ENST00000490993 CYSRT1A8MQ03 144 aa5.11□□□□□ -1.59
NPHP3-208ENST00000490993 RETNQ9HD89 108 aa5.11□□□□□ -1.59
NPHP3-208ENST00000490993 ABCA12Q86UK0 2595 aa5.11□□□□□ -1.59
NPHP3-208ENST00000490993 Q6ZTC4 211 aa5.11□□□□□ -1.59
NPHP3-208ENST00000490993 LINC00643Q86TS7 51 aa5.11□□□□□ -1.59
NPHP3-208ENST00000490993 EGFEM1PQ0D2K5 195 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms