RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 KPRPQ5T749 579 aaPredicted RBP6.51□□□□□ -1.37
LSAMP-205ENST00000490035 RPL28P46779 137 aaKnown RBP6.51□□□□□ -1.37
LSAMP-205ENST00000490035 CDC42SE2Q9NRR3 84 aa6.51□□□□□ -1.37
LSAMP-205ENST00000490035 COL27A1Q8IZC6 1860 aaPredicted RBP6.51□□□□□ -1.37
LSAMP-205ENST00000490035 C2CD3Q4AC94 2353 aa6.51□□□□□ -1.37
LSAMP-205ENST00000490035 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.51□□□□□ -1.37
LSAMP-205ENST00000490035 SMIM11BQ8TCY0 68 aa6.5□□□□□ -1.37
LSAMP-205ENST00000490035 MAPKAPK5-AS1Q8N8E1 139 aa6.5□□□□□ -1.37
LSAMP-205ENST00000490035 DEFB1P60022 68 aa6.5□□□□□ -1.37
LSAMP-205ENST00000490035 UBE2D3P61077 147 aa6.5□□□□□ -1.37
LSAMP-205ENST00000490035 UBE2D2P62837 147 aa6.5□□□□□ -1.37
LSAMP-205ENST00000490035 EGFEM1PQ0D2K5 195 aa6.5□□□□□ -1.37
LSAMP-205ENST00000490035 NRGNQ92686 78 aa6.5□□□□□ -1.37
LSAMP-205ENST00000490035 ZNF73O43830 326 aaPredicted RBP6.5□□□□□ -1.37
LSAMP-205ENST00000490035 PRB1P04280 392 aa6.5□□□□□ -1.37
LSAMP-205ENST00000490035 C1orf158Q8N1D5 194 aa6.49□□□□□ -1.37
LSAMP-205ENST00000490035 HIVEP3Q5T1R4 2406 aa6.49□□□□□ -1.37
LSAMP-205ENST00000490035 IGIPA6NJ69 53 aa6.49□□□□□ -1.37
LSAMP-205ENST00000490035 SMIM26A0A096LP01 95 aa6.49□□□□□ -1.37
LSAMP-205ENST00000490035 NUPR2A6NF83 97 aa6.49□□□□□ -1.37
LSAMP-205ENST00000490035 WFDC10BQ8IUB3 73 aa6.48□□□□□ -1.37
LSAMP-205ENST00000490035 MRPS12O15235 138 aaKnown RBP6.48□□□□□ -1.37
LSAMP-205ENST00000490035 CCDC168Q8NDH2 2452 aa6.48□□□□□ -1.37
LSAMP-205ENST00000490035 A0A1B0GUV1 79 aa6.47□□□□□ -1.37
LSAMP-205ENST00000490035 Q6ZQY7 126 aa6.47□□□□□ -1.37
LSAMP-205ENST00000490035 FAM19A5Q7Z5A7 132 aaPredicted RBP6.47□□□□□ -1.37
LSAMP-205ENST00000490035 C1orf229Q6ZS94 237 aaPredicted RBP6.47□□□□□ -1.37
LSAMP-205ENST00000490035 A0A1B0GW54 56 aa6.47□□□□□ -1.37
LSAMP-205ENST00000490035 A6NED7 52 aa6.46□□□□□ -1.37
LSAMP-205ENST00000490035 MPLKIPQ8TAP9 179 aa6.46□□□□□ -1.37
LSAMP-205ENST00000490035 ZNF843Q8N446 348 aa6.46□□□□□ -1.37
LSAMP-205ENST00000490035 BBC3Q96PG8 261 aaPredicted RBP6.46□□□□□ -1.37
LSAMP-205ENST00000490035 NOTCH2Q04721 2471 aa6.46□□□□□ -1.37
LSAMP-205ENST00000490035 LINC01006Q8NI28 216 aa6.46□□□□□ -1.37
LSAMP-205ENST00000490035 PCSK5Q92824 1860 aa6.46□□□□□ -1.38
LSAMP-205ENST00000490035 XAGE1AQ9HD64 81 aa6.46□□□□□ -1.38
LSAMP-205ENST00000490035 NTM-AS1Q6ZSK4 140 aa6.46□□□□□ -1.38
LSAMP-205ENST00000490035 Q8N814 137 aa6.45□□□□□ -1.38
LSAMP-205ENST00000490035 ZFYVE26Q68DK2 2539 aa6.45□□□□□ -1.38
LSAMP-205ENST00000490035 PIEZO1Q92508 2521 aa6.45□□□□□ -1.38
LSAMP-205ENST00000490035 NAV2Q8IVL1 2488 aa6.45□□□□□ -1.38
LSAMP-205ENST00000490035 C3orf84H3BNL1 204 aa6.45□□□□□ -1.38
LSAMP-205ENST00000490035 PRYO14603 147 aa6.45□□□□□ -1.38
LSAMP-205ENST00000490035 C2orf48Q96LS8 159 aa6.44□□□□□ -1.38
LSAMP-205ENST00000490035 PRO3102Q9H379 93 aa6.44□□□□□ -1.38
LSAMP-205ENST00000490035 C16orf95Q9H693 158 aa6.44□□□□□ -1.38
LSAMP-205ENST00000490035 C19orf84I3L1E1 186 aa6.44□□□□□ -1.38
LSAMP-205ENST00000490035 SLPIP03973 132 aa6.44□□□□□ -1.38
LSAMP-205ENST00000490035 INAFM1C9JVW0 142 aa6.44□□□□□ -1.38
LSAMP-205ENST00000490035 WFDC11Q8NEX6 87 aa6.44□□□□□ -1.38
LSAMP-205ENST00000490035 AMELXQ99217 191 aa6.44□□□□□ -1.38
LSAMP-205ENST00000490035 C10orf142B7Z368 130 aa6.43□□□□□ -1.38
LSAMP-205ENST00000490035 REG3GQ6UW15 175 aa6.43□□□□□ -1.38
LSAMP-205ENST00000490035 BEAN1Q3B7T3 259 aa6.42□□□□□ -1.38
LSAMP-205ENST00000490035 IGKV2-28A0A075B6P5 120 aa6.42□□□□□ -1.38
LSAMP-205ENST00000490035 PLAC8L1A1L4L8 177 aa6.42□□□□□ -1.38
LSAMP-205ENST00000490035 IGKV2D-28P01615 120 aa6.42□□□□□ -1.38
LSAMP-205ENST00000490035 CYSRT1A8MQ03 144 aa6.42□□□□□ -1.38
LSAMP-205ENST00000490035 IGLV1-51P01701 117 aa6.42□□□□□ -1.38
LSAMP-205ENST00000490035 TRBV10-3A0A0K0K1G6 114 aa6.42□□□□□ -1.38
LSAMP-205ENST00000490035 PRB2P02812 416 aaPredicted RBP6.42□□□□□ -1.38
LSAMP-205ENST00000490035 LY6G6DO95868 133 aa6.42□□□□□ -1.38
LSAMP-205ENST00000490035 LINC00242Q5T6M2 205 aa6.42□□□□□ -1.38
LSAMP-205ENST00000490035 SMIM1B2RUZ4 78 aa6.41□□□□□ -1.38
LSAMP-205ENST00000490035 BCE1O60756 84 aa6.41□□□□□ -1.38
LSAMP-205ENST00000490035 CXCL6P80162 114 aa6.41□□□□□ -1.38
LSAMP-205ENST00000490035 LINC00526Q96FQ7 95 aa6.41□□□□□ -1.38
LSAMP-205ENST00000490035 WDR87Q6ZQQ6 2873 aa6.4□□□□□ -1.38
LSAMP-205ENST00000490035 PROK1P58294 105 aa6.4□□□□□ -1.38
LSAMP-205ENST00000490035 C1orf137Q5JT78 98 aa6.4□□□□□ -1.38
LSAMP-205ENST00000490035 PRR9Q5T870 116 aa6.4□□□□□ -1.38
LSAMP-205ENST00000490035 C22orf34Q6ZV56 151 aa6.4□□□□□ -1.39
LSAMP-205ENST00000490035 POM121L12Q8N7R1 296 aa6.4□□□□□ -1.39
LSAMP-205ENST00000490035 SCXQ7RTU7 201 aa6.4□□□□□ -1.39
LSAMP-205ENST00000490035 hDV103S1A0JD37 113 aa6.39□□□□□ -1.39
LSAMP-205ENST00000490035 C11orf21Q9P2W6 132 aa6.39□□□□□ -1.39
LSAMP-205ENST00000490035 LINC00482Q8N8I6 264 aa6.39□□□□□ -1.39
LSAMP-205ENST00000490035 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.39□□□□□ -1.39
LSAMP-205ENST00000490035 RPL37AP8A6NKH3 93 aa6.39□□□□□ -1.39
LSAMP-205ENST00000490035 WFDC10AQ9H1F0 79 aa6.39□□□□□ -1.39
LSAMP-205ENST00000490035 LINC01546A6NGU7 62 aa6.39□□□□□ -1.39
LSAMP-205ENST00000490035 Q6ZS46 218 aa6.39□□□□□ -1.39
LSAMP-205ENST00000490035 FN1P02751 2386 aaKnown RBP6.38□□□□□ -1.39
LSAMP-205ENST00000490035 TLN1Q9Y490 2541 aaKnown RBP6.38□□□□□ -1.39
LSAMP-205ENST00000490035 NHLRC4P0CG21 123 aaPredicted RBP6.38□□□□□ -1.39
LSAMP-205ENST00000490035 IGHV4-30-4P0DP06 118 aa6.38□□□□□ -1.39
LSAMP-205ENST00000490035 PIEZO2Q9H5I5 2752 aa6.37□□□□□ -1.39
LSAMP-205ENST00000490035 WISP2O76076 250 aa6.37□□□□□ -1.39
LSAMP-205ENST00000490035 LIMD2Q9BT23 127 aa6.37□□□□□ -1.39
LSAMP-205ENST00000490035 SNURFQ9Y675 71 aa6.37□□□□□ -1.39
LSAMP-205ENST00000490035 XGP55808 180 aa6.37□□□□□ -1.39
LSAMP-205ENST00000490035 A0A096LNI7 61 aa6.37□□□□□ -1.39
LSAMP-205ENST00000490035 TRBV7-6A0A0J9YX20 115 aa6.37□□□□□ -1.39
LSAMP-205ENST00000490035 Q8N2B8 174 aa6.37□□□□□ -1.39
LSAMP-205ENST00000490035 Q6ZVQ6 151 aa6.36□□□□□ -1.39
LSAMP-205ENST00000490035 LRCOL1A6NCL2 159 aa6.36□□□□□ -1.39
LSAMP-205ENST00000490035 WFDC13Q8IUB5 93 aa6.36□□□□□ -1.39
LSAMP-205ENST00000490035 C1orf195Q5TG92 126 aa6.36□□□□□ -1.39
LSAMP-205ENST00000490035 TP53AIP1Q9HCN2 124 aa6.36□□□□□ -1.39
LSAMP-205ENST00000490035 ODF3L2Q3SX64 289 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms