RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 AMELXQ99217 191 aa5.34□□□□□ -1.55
SMC6-209ENST00000489535 CST9LQ9H4G1 147 aa5.34□□□□□ -1.55
SMC6-209ENST00000489535 COL7A1Q02388 2944 aa5.34□□□□□ -1.55
SMC6-209ENST00000489535 DYNC2H1Q8NCM8 4307 aaKnown RBP5.34□□□□□ -1.55
SMC6-209ENST00000489535 DNAH7Q8WXX0 4024 aa5.33□□□□□ -1.56
SMC6-209ENST00000489535 IGLV4-69A0A075B6H9 119 aa5.33□□□□□ -1.56
SMC6-209ENST00000489535 C11orf86A6NJI1 115 aa5.33□□□□□ -1.56
SMC6-209ENST00000489535 H3BNG1 76 aa5.33□□□□□ -1.56
SMC6-209ENST00000489535 TCTAP57738 103 aa5.33□□□□□ -1.56
SMC6-209ENST00000489535 MRPS36P82909 103 aaKnown RBP5.33□□□□□ -1.56
SMC6-209ENST00000489535 OR5A1Q8NGJ0 315 aa5.33□□□□□ -1.56
SMC6-209ENST00000489535 C2orf88Q9BSF0 95 aa5.33□□□□□ -1.56
SMC6-209ENST00000489535 MGAM2Q2M2H8 2515 aa5.33□□□□□ -1.56
SMC6-209ENST00000489535 PRKDCP78527 4128 aaKnown RBP5.33□□□□□ -1.56
SMC6-209ENST00000489535 A0A0J9YXV3 536 aa5.32□□□□□ -1.56
SMC6-209ENST00000489535 ZNF25P17030 456 aaPredicted RBP5.32□□□□□ -1.56
SMC6-209ENST00000489535 LELP1Q5T871 98 aa5.32□□□□□ -1.56
SMC6-209ENST00000489535 STPG4Q8N801 248 aa5.32□□□□□ -1.56
SMC6-209ENST00000489535 CHAC1Q9BUX1 264 aa5.32□□□□□ -1.56
SMC6-209ENST00000489535 CDC42SE2Q9NRR3 84 aa5.32□□□□□ -1.56
SMC6-209ENST00000489535 FAM30AQ9NZY2 134 aa5.32□□□□□ -1.56
SMC6-209ENST00000489535 CSDC2Q9Y534 153 aaKnown RBP5.32□□□□□ -1.56
SMC6-209ENST00000489535 IGLV4-60A0A075B6I1 120 aa5.31□□□□□ -1.56
SMC6-209ENST00000489535 TMEM262E9PQX1 116 aa5.31□□□□□ -1.56
SMC6-209ENST00000489535 NHLRC4P0CG21 123 aaPredicted RBP5.31□□□□□ -1.56
SMC6-209ENST00000489535 IGLC3P0DOY3 106 aa5.31□□□□□ -1.56
SMC6-209ENST00000489535 LYPD5Q6UWN5 251 aa5.31□□□□□ -1.56
SMC6-209ENST00000489535 NFE4Q86UQ8 179 aa5.31□□□□□ -1.56
SMC6-209ENST00000489535 C14orf144Q96I85 54 aa5.31□□□□□ -1.56
SMC6-209ENST00000489535 IGKV3OR2-268A0A0C4DH90 116 aa5.3□□□□□ -1.56
SMC6-209ENST00000489535 NMUP48645 174 aa5.3□□□□□ -1.56
SMC6-209ENST00000489535 UBE2D1P51668 147 aa5.3□□□□□ -1.56
SMC6-209ENST00000489535 MPV17L2Q567V2 206 aa5.3□□□□□ -1.56
SMC6-209ENST00000489535 TMEM170BQ5T4T1 132 aa5.3□□□□□ -1.56
SMC6-209ENST00000489535 C15orf53Q8NAA6 179 aa5.3□□□□□ -1.56
SMC6-209ENST00000489535 IGKV2D-26A0A0A0MRZ7 120 aa5.29□□□□□ -1.56
SMC6-209ENST00000489535 TRAV13-1A0A0B4J241 112 aa5.29□□□□□ -1.56
SMC6-209ENST00000489535 TRAV8-6A0A0B4J262 113 aa5.29□□□□□ -1.56
SMC6-209ENST00000489535 A0A1B0GUV1 79 aa5.29□□□□□ -1.56
SMC6-209ENST00000489535 TINCRA0A1B0GVN0 87 aa5.29□□□□□ -1.56
SMC6-209ENST00000489535 ZNF22P17026 224 aaPredicted RBP5.29□□□□□ -1.56
SMC6-209ENST00000489535 DDTP30046 118 aa5.29□□□□□ -1.56
SMC6-209ENST00000489535 TIRAPP58753 221 aa5.29□□□□□ -1.56
SMC6-209ENST00000489535 HERVK_113P61574 105 aa5.29□□□□□ -1.56
SMC6-209ENST00000489535 RBX1P62877 108 aa5.29□□□□□ -1.56
SMC6-209ENST00000489535 MIEN1Q9BRT3 115 aa5.29□□□□□ -1.56
SMC6-209ENST00000489535 UQCR10Q9UDW1 63 aa5.29□□□□□ -1.56
SMC6-209ENST00000489535 TP73-AS1Q9UF72 201 aa5.29□□□□□ -1.56
SMC6-209ENST00000489535 IGKV2D-30A0A075B6S6 120 aa5.28□□□□□ -1.56
SMC6-209ENST00000489535 TMEM223A0PJW6 202 aa5.28□□□□□ -1.56
SMC6-209ENST00000489535 IGLL5B9A064 214 aa5.28□□□□□ -1.56
SMC6-209ENST00000489535 COX8AP10176 69 aa5.28□□□□□ -1.56
SMC6-209ENST00000489535 SEC11AP67812 179 aa5.28□□□□□ -1.56
SMC6-209ENST00000489535 ESRGQ1W209 222 aa5.28□□□□□ -1.56
SMC6-209ENST00000489535 SLC25A34Q6PIV7 304 aa5.28□□□□□ -1.56
SMC6-209ENST00000489535 FAM19A3Q7Z5A8 133 aa5.28□□□□□ -1.56
SMC6-209ENST00000489535 WFDC10BQ8IUB3 73 aa5.28□□□□□ -1.56
SMC6-209ENST00000489535 GEMIN7Q9H840 131 aaKnown RBP5.28□□□□□ -1.56
SMC6-209ENST00000489535 IGHV3-64A0A075B6Q5 118 aa5.27□□□□□ -1.57
SMC6-209ENST00000489535 LINC00587B1AMM8 73 aa5.27□□□□□ -1.57
SMC6-209ENST00000489535 E9PLD3 99 aa5.27□□□□□ -1.57
SMC6-209ENST00000489535 IGHV3-30P01768 117 aa5.27□□□□□ -1.57
SMC6-209ENST00000489535 IGHV3-33P01772 117 aa5.27□□□□□ -1.57
SMC6-209ENST00000489535 ANGP03950 147 aaKnown RBP5.27□□□□□ -1.57
SMC6-209ENST00000489535 IGHV3-30-3P0DP02 117 aa5.27□□□□□ -1.57
SMC6-209ENST00000489535 IGHV3-30-5P0DP03 117 aa5.27□□□□□ -1.57
SMC6-209ENST00000489535 HNRNPA3P51991 378 aaKnown RBP5.27□□□□□ -1.57
SMC6-209ENST00000489535 HERVK_113P63121 156 aa5.27□□□□□ -1.57
SMC6-209ENST00000489535 COX6A2Q02221 97 aa5.27□□□□□ -1.57
SMC6-209ENST00000489535 LINC00242Q5T6M2 205 aa5.27□□□□□ -1.57
SMC6-209ENST00000489535 CLPSL2Q6UWE3 100 aa5.27□□□□□ -1.57
SMC6-209ENST00000489535 PCP2Q8IVA1 136 aa5.27□□□□□ -1.57
SMC6-209ENST00000489535 LINC00469Q8N7U9 141 aa5.27□□□□□ -1.57
SMC6-209ENST00000489535 PLECQ15149 4684 aaKnown RBP5.26□□□□□ -1.57
SMC6-209ENST00000489535 IGLV5-45A0A087WSX0 123 aa5.26□□□□□ -1.57
SMC6-209ENST00000489535 LINC00959A0A1B0GUT2 108 aa5.26□□□□□ -1.57
SMC6-209ENST00000489535 H3BRM9 83 aa5.26□□□□□ -1.57
SMC6-209ENST00000489535 LEPROTO15243 131 aa5.26□□□□□ -1.57
SMC6-209ENST00000489535 SPINK8P0C7L1 97 aa5.26□□□□□ -1.57
SMC6-209ENST00000489535 SS18Q15532 418 aa5.26□□□□□ -1.57
SMC6-209ENST00000489535 BOD1L2Q8IYS8 172 aa5.26□□□□□ -1.57
SMC6-209ENST00000489535 LINC00269Q8N2A0 174 aa5.26□□□□□ -1.57
SMC6-209ENST00000489535 TTTY13Q9BZ97 58 aa5.26□□□□□ -1.57
SMC6-209ENST00000489535 CDKN2A-AS1Q9UH64 79 aa5.26□□□□□ -1.57
SMC6-209ENST00000489535 STARD9Q9P2P6 4700 aa5.26□□□□□ -1.57
SMC6-209ENST00000489535 CSMD3Q7Z407 3707 aa5.25□□□□□ -1.57
SMC6-209ENST00000489535 TRAV8-3A0A0A6YYJ7 113 aa5.25□□□□□ -1.57
SMC6-209ENST00000489535 REG3AQ06141 175 aa5.25□□□□□ -1.57
SMC6-209ENST00000489535 MAPKAPK5-AS1Q8N8E1 139 aa5.25□□□□□ -1.57
SMC6-209ENST00000489535 PLEKHB2Q96CS7 222 aa5.25□□□□□ -1.57
SMC6-209ENST00000489535 KLK12Q9UKR0 248 aa5.25□□□□□ -1.57
SMC6-209ENST00000489535 LYSTQ99698 3801 aa5.24□□□□□ -1.57
SMC6-209ENST00000489535 IGHV1-58A0A0C4DH39 117 aa5.24□□□□□ -1.57
SMC6-209ENST00000489535 J3QQQ9 107 aa5.24□□□□□ -1.57
SMC6-209ENST00000489535 CCL25O15444 150 aa5.24□□□□□ -1.57
SMC6-209ENST00000489535 DLEU1O43261 78 aa5.24□□□□□ -1.57
SMC6-209ENST00000489535 LGALS3P17931 250 aaKnown RBP5.24□□□□□ -1.57
SMC6-209ENST00000489535 CCL18P55774 89 aa5.24□□□□□ -1.57
SMC6-209ENST00000489535 TSPEAR-AS2P59090 65 aa5.24□□□□□ -1.57
SMC6-209ENST00000489535 C2orf91Q6ZV80 131 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms