RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 BAGE2Q86Y30 109 aa6.35□□□□□ -1.39
HDAC6-233ENST00000489352 KCNRGQ8N5I3 272 aa6.35□□□□□ -1.39
HDAC6-233ENST00000489352 RPL39LQ96EH5 51 aaKnown RBP6.35□□□□□ -1.39
HDAC6-233ENST00000489352 TCEAL7Q9BRU2 100 aa6.35□□□□□ -1.39
HDAC6-233ENST00000489352 TRBV30A0A0K0K1B3 111 aa6.34□□□□□ -1.39
HDAC6-233ENST00000489352 RPS20P60866 119 aaKnown RBP6.34□□□□□ -1.39
HDAC6-233ENST00000489352 RNASE13Q5GAN3 156 aaKnown RBP6.34□□□□□ -1.39
HDAC6-233ENST00000489352 RPL37AP8A6NKH3 93 aa6.33□□□□□ -1.4
HDAC6-233ENST00000489352 TEX261Q6UWH6 196 aa6.33□□□□□ -1.4
HDAC6-233ENST00000489352 SLC51BQ86UW2 128 aa6.33□□□□□ -1.4
HDAC6-233ENST00000489352 FAM19A2Q8N3H0 131 aa6.33□□□□□ -1.4
HDAC6-233ENST00000489352 PSMG3Q9BT73 122 aaPredicted RBP6.33□□□□□ -1.4
HDAC6-233ENST00000489352 BORCS7-ASMTA0A0B4J1R7 106 aa6.32□□□□□ -1.4
HDAC6-233ENST00000489352 XKRY2A2RUG3 117 aa6.32□□□□□ -1.4
HDAC6-233ENST00000489352 C7orf77A4D0Y5 90 aa6.32□□□□□ -1.4
HDAC6-233ENST00000489352 SPINK1P00995 79 aa6.32□□□□□ -1.4
HDAC6-233ENST00000489352 IGLC6P0CF74 106 aa6.32□□□□□ -1.4
HDAC6-233ENST00000489352 TWIST1Q15672 202 aa6.32□□□□□ -1.4
HDAC6-233ENST00000489352 LINC00469Q8N7U9 141 aa6.32□□□□□ -1.4
HDAC6-233ENST00000489352 KRTAP6-3Q3LI67 103 aa6.31□□□□□ -1.4
HDAC6-233ENST00000489352 LYZL1Q6UWQ5 148 aa6.31□□□□□ -1.4
HDAC6-233ENST00000489352 SMIM15Q7Z3B0 74 aa6.31□□□□□ -1.4
HDAC6-233ENST00000489352 TMEM242Q9NWH2 141 aa6.31□□□□□ -1.4
HDAC6-233ENST00000489352 TP73-AS1Q9UF72 201 aa6.31□□□□□ -1.4
HDAC6-233ENST00000489352 CTXND1A0A1B0GTU2 59 aa6.3□□□□□ -1.4
HDAC6-233ENST00000489352 ZNF727A8MUV8 499 aa6.3□□□□□ -1.4
HDAC6-233ENST00000489352 FHITP49789 147 aa6.29□□□□□ -1.4
HDAC6-233ENST00000489352 FOXA3P55318 350 aaPredicted RBP6.29□□□□□ -1.4
HDAC6-233ENST00000489352 IFITM2Q01629 132 aa6.29□□□□□ -1.4
HDAC6-233ENST00000489352 LINC00167Q96N53 147 aa6.29□□□□□ -1.4
HDAC6-233ENST00000489352 XAGE1AQ9HD64 81 aa6.29□□□□□ -1.4
HDAC6-233ENST00000489352 CSDC2Q9Y534 153 aaKnown RBP6.29□□□□□ -1.4
HDAC6-233ENST00000489352 NEBP20929 6669 aa6.28□□□□□ -1.4
HDAC6-233ENST00000489352 GAGE10A6NGK3 116 aa6.28□□□□□ -1.4
HDAC6-233ENST00000489352 IFNA1P01562 189 aa6.28□□□□□ -1.4
HDAC6-233ENST00000489352 RAB14P61106 215 aa6.28□□□□□ -1.4
HDAC6-233ENST00000489352 C2orf82Q6UX34 121 aa6.28□□□□□ -1.4
HDAC6-233ENST00000489352 KRTAP13-1Q8IUC0 172 aa6.28□□□□□ -1.4
HDAC6-233ENST00000489352 Q8NBF4 154 aa6.28□□□□□ -1.4
HDAC6-233ENST00000489352 ST20Q9HBF5 79 aa6.28□□□□□ -1.4
HDAC6-233ENST00000489352 FCER1GP30273 86 aa6.27□□□□□ -1.41
HDAC6-233ENST00000489352 RPL7L1Q6DKI1 246 aaKnown RBP6.27□□□□□ -1.41
HDAC6-233ENST00000489352 TGIF2-C20orf24A0A0A6YYL0 155 aa6.26□□□□□ -1.41
HDAC6-233ENST00000489352 IGHV3OR16-9A0A0B4J2B5 98 aa6.26□□□□□ -1.41
HDAC6-233ENST00000489352 RAB19A4D1S5 217 aa6.26□□□□□ -1.41
HDAC6-233ENST00000489352 ZNF726P1Q15940 193 aa6.26□□□□□ -1.41
HDAC6-233ENST00000489352 RNASE7Q9H1E1 156 aaKnown RBP6.26□□□□□ -1.41
HDAC6-233ENST00000489352 SLC25A20O43772 301 aa6.25□□□□□ -1.41
HDAC6-233ENST00000489352 PRLHP81277 87 aa6.25□□□□□ -1.41
HDAC6-233ENST00000489352 NDUFA5Q16718 116 aa6.25□□□□□ -1.41
HDAC6-233ENST00000489352 KRTAP20-1Q3LI63 56 aa6.25□□□□□ -1.41
HDAC6-233ENST00000489352 AKR1C8PQ5T2L2 129 aa6.25□□□□□ -1.41
HDAC6-233ENST00000489352 ALKAL2Q6UX46 152 aa6.25□□□□□ -1.41
HDAC6-233ENST00000489352 TRBV6-5A0A0K0K1A5 114 aa6.24□□□□□ -1.41
HDAC6-233ENST00000489352 SCO2A0A1W2PP80 73 aa6.24□□□□□ -1.41
HDAC6-233ENST00000489352 PAGE4O60829 102 aa6.24□□□□□ -1.41
HDAC6-233ENST00000489352 RPL32P62910 135 aaKnown RBP6.24□□□□□ -1.41
HDAC6-233ENST00000489352 PNRC1Q12796 327 aaPredicted RBP6.24□□□□□ -1.41
HDAC6-233ENST00000489352 KIAA0087Q14695 138 aa6.24□□□□□ -1.41
HDAC6-233ENST00000489352 CLLU1Q5K131 121 aa6.24□□□□□ -1.41
HDAC6-233ENST00000489352 Q6ZUT4 128 aa6.24□□□□□ -1.41
HDAC6-233ENST00000489352 FAM19A1Q7Z5A9 133 aa6.24□□□□□ -1.41
HDAC6-233ENST00000489352 TMEM18Q96B42 140 aa6.24□□□□□ -1.41
HDAC6-233ENST00000489352 PLEKHB2Q96CS7 222 aa6.24□□□□□ -1.41
HDAC6-233ENST00000489352 MAP1LC3B2A6NCE7 125 aa6.23□□□□□ -1.41
HDAC6-233ENST00000489352 UMAD1C9J7I0 102 aa6.23□□□□□ -1.41
HDAC6-233ENST00000489352 PRSS2P07478 247 aa6.23□□□□□ -1.41
HDAC6-233ENST00000489352 CKS1BP61024 79 aa6.23□□□□□ -1.41
HDAC6-233ENST00000489352 MAP1LC3BQ9GZQ8 125 aa6.23□□□□□ -1.41
HDAC6-233ENST00000489352 BLOC1S1P78537 153 aa6.22□□□□□ -1.41
HDAC6-233ENST00000489352 CBLN2Q8IUK8 224 aa6.22□□□□□ -1.41
HDAC6-233ENST00000489352 NKAPP1Q8N9T2 125 aa6.22□□□□□ -1.41
HDAC6-233ENST00000489352 GNB1LQ9BYB4 327 aa6.22□□□□□ -1.41
HDAC6-233ENST00000489352 Q6Q795 121 aa6.21□□□□□ -1.42
HDAC6-233ENST00000489352 Q8N377 158 aa6.21□□□□□ -1.42
HDAC6-233ENST00000489352 IGKV2-28A0A075B6P5 120 aa6.2□□□□□ -1.42
HDAC6-233ENST00000489352 TRBV27A0A0K0K1C4 114 aa6.2□□□□□ -1.42
HDAC6-233ENST00000489352 TEX46H3BTG2 121 aa6.2□□□□□ -1.42
HDAC6-233ENST00000489352 IGKV2D-28P01615 120 aa6.2□□□□□ -1.42
HDAC6-233ENST00000489352 FAM213BQ8TBF2 198 aa6.2□□□□□ -1.42
HDAC6-233ENST00000489352 LINC00862A6NCI5 91 aa6.19□□□□□ -1.42
HDAC6-233ENST00000489352 IFITM10A6NMD0 228 aa6.19□□□□□ -1.42
HDAC6-233ENST00000489352 VCYO14598 125 aa6.19□□□□□ -1.42
HDAC6-233ENST00000489352 RPL35P42766 123 aaKnown RBP6.19□□□□□ -1.42
HDAC6-233ENST00000489352 POLR2KP53803 58 aaKnown RBP6.19□□□□□ -1.42
HDAC6-233ENST00000489352 C6orf226Q5I0X4 101 aa6.19□□□□□ -1.42
HDAC6-233ENST00000489352 TIMM21Q9BVV7 248 aa6.19□□□□□ -1.42
HDAC6-233ENST00000489352 HIGD2AQ9BW72 106 aa6.19□□□□□ -1.42
HDAC6-233ENST00000489352 KRTAP9-8Q9BYQ0 159 aa6.19□□□□□ -1.42
HDAC6-233ENST00000489352 MED9Q9NWA0 146 aa6.19□□□□□ -1.42
HDAC6-233ENST00000489352 TOMM7Q9P0U1 55 aa6.19□□□□□ -1.42
HDAC6-233ENST00000489352 RPS29P62273 56 aaKnown RBP6.18□□□□□ -1.42
HDAC6-233ENST00000489352 HBBP68871 147 aa6.18□□□□□ -1.42
HDAC6-233ENST00000489352 ZNF706Q9Y5V0 76 aaPredicted RBP6.18□□□□□ -1.42
HDAC6-233ENST00000489352 C9orf92A6NGG3 77 aa6.17□□□□□ -1.42
HDAC6-233ENST00000489352 H2AFB1P0C5Y9 115 aa6.17□□□□□ -1.42
HDAC6-233ENST00000489352 COMMD7Q86VX2 200 aa6.17□□□□□ -1.42
HDAC6-233ENST00000489352 CNFNQ9BYD5 112 aa6.17□□□□□ -1.42
HDAC6-233ENST00000489352 LCE2BO14633 110 aa6.16□□□□□ -1.42
HDAC6-233ENST00000489352 CENPWQ5EE01 88 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms