RNA–Protein interactions for RNA: ENST00000489266.5

NSMCE4A-211, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best)

Gene NSMCE4A, Length 2,399 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-211ENST00000489266 RELNP78509 3460 aa15.11■□□□□ 0.01
NSMCE4A-211ENST00000489266 Q96MF0 132 aa15.1■□□□□ 0.01
NSMCE4A-211ENST00000489266 JMJD7-PLA2G4BH0Y9G9 81 aa15.1■□□□□ 0.01
NSMCE4A-211ENST00000489266 SPTBN1Q01082 2364 aaKnown RBP15.1■□□□□ 0.01
NSMCE4A-211ENST00000489266 IGF2RP11717 2491 aa15.09■□□□□ 0.01
NSMCE4A-211ENST00000489266 CCL18P55774 89 aa15.09■□□□□ 0.01
NSMCE4A-211ENST00000489266 NBASA2RRP1 2371 aa15.08■□□□□ 0
NSMCE4A-211ENST00000489266 LY6EQ16553 131 aa15.08■□□□□ 0
NSMCE4A-211ENST00000489266 PRM2P04554 102 aa15.07■□□□□ 0
NSMCE4A-211ENST00000489266 BLCAPP62952 87 aa15.07■□□□□ 0
NSMCE4A-211ENST00000489266 CFHR3Q02985 330 aa15.07■□□□□ 0
NSMCE4A-211ENST00000489266 UBL5Q9BZL1 73 aa15.07■□□□□ 0
NSMCE4A-211ENST00000489266 C11orf72Q8NBR9 251 aa15.06■□□□□ 0
NSMCE4A-211ENST00000489266 LINC00167Q96N53 147 aa15.06■□□□□ 0
NSMCE4A-211ENST00000489266 A6NDX4 124 aa15.05■□□□□ 0
NSMCE4A-211ENST00000489266 BRD3OSQ6XYD6 125 aa15.05■□□□□ 0
NSMCE4A-211ENST00000489266 CCL21O00585 134 aa15.05■□□□□ -0
NSMCE4A-211ENST00000489266 CDSNQ15517 529 aa15.05■□□□□ -0
NSMCE4A-211ENST00000489266 LINC00158P58513 81 aa15.04■□□□□ -0
NSMCE4A-211ENST00000489266 SEC61GP60059 68 aa15.04■□□□□ -0
NSMCE4A-211ENST00000489266 COX7B2Q8TF08 81 aa15.04■□□□□ -0
NSMCE4A-211ENST00000489266 RMI2Q96E14 147 aa15.04■□□□□ -0
NSMCE4A-211ENST00000489266 BPESC1Q9GZL8 116 aa15.04■□□□□ -0
NSMCE4A-211ENST00000489266 CDC42SE2Q9NRR3 84 aa15.04■□□□□ -0
NSMCE4A-211ENST00000489266 V9GYY9 64 aa15.03■□□□□ -0
NSMCE4A-211ENST00000489266 HRNRQ86YZ3 2850 aaPredicted RBP15.03■□□□□ -0
NSMCE4A-211ENST00000489266 F8WEM9 126 aa15.03■□□□□ -0
NSMCE4A-211ENST00000489266 LINC00474Q9P2X8 69 aa15.03■□□□□ -0
NSMCE4A-211ENST00000489266 SNURFQ9Y675 71 aa15.03■□□□□ -0
NSMCE4A-211ENST00000489266 ZFHX3Q15911 3703 aa15.02□□□□□ -0.01
NSMCE4A-211ENST00000489266 ATRXP46100 2492 aa15.02□□□□□ -0.01
NSMCE4A-211ENST00000489266 C1orf195Q5TG92 126 aa15.02□□□□□ -0.01
NSMCE4A-211ENST00000489266 TRBV7-6A0A0J9YX20 115 aa15.01□□□□□ -0.01
NSMCE4A-211ENST00000489266 H3BUX3 64 aa15.01□□□□□ -0.01
NSMCE4A-211ENST00000489266 LY6G6DO95868 133 aa15.01□□□□□ -0.01
NSMCE4A-211ENST00000489266 SORL1Q92673 2214 aa15.01□□□□□ -0.01
NSMCE4A-211ENST00000489266 BRK1Q8WUW1 75 aa15□□□□□ -0.01
NSMCE4A-211ENST00000489266 COL6A6A6NMZ7 2263 aa15□□□□□ -0.01
NSMCE4A-211ENST00000489266 A8MTW9 85 aa14.99□□□□□ -0.01
NSMCE4A-211ENST00000489266 ADORA2A-AS1P86434 159 aa14.99□□□□□ -0.01
NSMCE4A-211ENST00000489266 TMEM256-PLSCR3K7ERE1 68 aa14.98□□□□□ -0.01
NSMCE4A-211ENST00000489266 PAX4O43316 350 aa14.98□□□□□ -0.01
NSMCE4A-211ENST00000489266 RBM3P98179 157 aaKnown RBP14.98□□□□□ -0.01
NSMCE4A-211ENST00000489266 LINC00482Q8N8I6 264 aa14.98□□□□□ -0.01
NSMCE4A-211ENST00000489266 A0A1W2PPR1 153 aa14.98□□□□□ -0.01
NSMCE4A-211ENST00000489266 TOMM7Q9P0U1 55 aa14.98□□□□□ -0.01
NSMCE4A-211ENST00000489266 TRBV6-4A0A1B0GX49 114 aa14.97□□□□□ -0.01
NSMCE4A-211ENST00000489266 NTM-AS1Q6ZSK4 140 aa14.97□□□□□ -0.01
NSMCE4A-211ENST00000489266 TRAV10A0A0B4J240 114 aa14.97□□□□□ -0.01
NSMCE4A-211ENST00000489266 A0A0U1RQV1 116 aa14.96□□□□□ -0.01
NSMCE4A-211ENST00000489266 IBA57-AS1B1ANH7 110 aa14.96□□□□□ -0.01
NSMCE4A-211ENST00000489266 Q8N814 137 aa14.96□□□□□ -0.02
NSMCE4A-211ENST00000489266 SPTBN4Q9H254 2564 aa14.95□□□□□ -0.02
NSMCE4A-211ENST00000489266 ASH1LQ9NR48 2969 aaKnown RBP14.95□□□□□ -0.02
NSMCE4A-211ENST00000489266 Q6ZTI0 123 aa14.95□□□□□ -0.02
NSMCE4A-211ENST00000489266 NDUFC1O43677 76 aa14.95□□□□□ -0.02
NSMCE4A-211ENST00000489266 ATP5EP56381 51 aaPredicted RBP14.94□□□□□ -0.02
NSMCE4A-211ENST00000489266 K7EQD1 137 aa14.93□□□□□ -0.02
NSMCE4A-211ENST00000489266 IGHV4-38-2P0DP08 117 aa14.92□□□□□ -0.02
NSMCE4A-211ENST00000489266 TMEM89A2RUT3 159 aa14.92□□□□□ -0.02
NSMCE4A-211ENST00000489266 LINC01547P58512 204 aaPredicted RBP14.92□□□□□ -0.02
NSMCE4A-211ENST00000489266 DEFB131AP59861 70 aa14.91□□□□□ -0.02
NSMCE4A-211ENST00000489266 A0A096LNT2 108 aa14.89□□□□□ -0.03
NSMCE4A-211ENST00000489266 Q6ZQT0 140 aa14.89□□□□□ -0.03
NSMCE4A-211ENST00000489266 TRBV10-1A0A0K0K1A3 114 aa14.88□□□□□ -0.03
NSMCE4A-211ENST00000489266 NANOS2P60321 138 aaKnown RBP14.87□□□□□ -0.03
NSMCE4A-211ENST00000489266 C10orf99Q6UWK7 81 aa14.86□□□□□ -0.03
NSMCE4A-211ENST00000489266 HIVEP3Q5T1R4 2406 aa14.86□□□□□ -0.03
NSMCE4A-211ENST00000489266 TRBV7-4A0A0J9YYF1 115 aa14.85□□□□□ -0.03
NSMCE4A-211ENST00000489266 HAMPP81172 84 aa14.85□□□□□ -0.03
NSMCE4A-211ENST00000489266 Q6ZVQ6 151 aa14.85□□□□□ -0.03
NSMCE4A-211ENST00000489266 NCOR2Q9Y618 2525 aa14.84□□□□□ -0.03
NSMCE4A-211ENST00000489266 UBE2L6O14933 153 aa14.84□□□□□ -0.03
NSMCE4A-211ENST00000489266 CHD8Q9HCK8 2581 aa14.84□□□□□ -0.03
NSMCE4A-211ENST00000489266 MIFP14174 115 aa14.84□□□□□ -0.03
NSMCE4A-211ENST00000489266 LOC110117498A0A087WWA1 95 aa14.83□□□□□ -0.03
NSMCE4A-211ENST00000489266 TM2D3Q9BRN9 247 aa14.83□□□□□ -0.03
NSMCE4A-211ENST00000489266 SPTAN1Q13813 2472 aaKnown RBP14.83□□□□□ -0.04
NSMCE4A-211ENST00000489266 RNASE1P07998 156 aaKnown RBP14.83□□□□□ -0.04
NSMCE4A-211ENST00000489266 ABCA2Q9BZC7 2435 aa14.83□□□□□ -0.04
NSMCE4A-211ENST00000489266 CXCL6P80162 114 aa14.82□□□□□ -0.04
NSMCE4A-211ENST00000489266 FAM229BQ4G0N7 80 aa14.82□□□□□ -0.04
NSMCE4A-211ENST00000489266 IGHV3OR16-9A0A0B4J2B5 98 aa14.82□□□□□ -0.04
NSMCE4A-211ENST00000489266 M0R2N4 97 aa14.81□□□□□ -0.04
NSMCE4A-211ENST00000489266 Q8N3U1 123 aa14.81□□□□□ -0.04
NSMCE4A-211ENST00000489266 INSP01308 110 aa14.81□□□□□ -0.04
NSMCE4A-211ENST00000489266 MPLKIPQ8TAP9 179 aa14.79□□□□□ -0.04
NSMCE4A-211ENST00000489266 IGKV3OR2-268A0A0C4DH90 116 aa14.78□□□□□ -0.04
NSMCE4A-211ENST00000489266 A0A087WZ39 114 aa14.78□□□□□ -0.04
NSMCE4A-211ENST00000489266 C11orf68Q9H3H3 251 aaKnown RBP14.77□□□□□ -0.04
NSMCE4A-211ENST00000489266 TRGV1A0A0A0MS02 117 aa14.77□□□□□ -0.05
NSMCE4A-211ENST00000489266 IL17DQ8TAD2 202 aa14.77□□□□□ -0.05
NSMCE4A-211ENST00000489266 AKAP6Q13023 2319 aa14.76□□□□□ -0.05
NSMCE4A-211ENST00000489266 IGHV4-61A0A0C4DH41 118 aa14.76□□□□□ -0.05
NSMCE4A-211ENST00000489266 ZNF561-AS1K7EIQ3 104 aa14.76□□□□□ -0.05
NSMCE4A-211ENST00000489266 C6orf223Q8N319 242 aa14.76□□□□□ -0.05
NSMCE4A-211ENST00000489266 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.76□□□□□ -0.057e-7■■■□□ 17.1
NSMCE4A-211ENST00000489266 PRR3P79522 188 aaKnown RBP14.75□□□□□ -0.05
NSMCE4A-211ENST00000489266 TMEM254Q8TBM7 123 aa14.75□□□□□ -0.05
NSMCE4A-211ENST00000489266 NREPQ16612 68 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms