RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 SPINK8P0C7L1 97 aa6.81□□□□□ -1.32
USP11-211ENST00000489111 DNAH10OSP0CZ25 163 aa6.81□□□□□ -1.32
USP11-211ENST00000489111 LGALS3P17931 250 aaKnown RBP6.81□□□□□ -1.32
USP11-211ENST00000489111 COX6A2Q02221 97 aa6.81□□□□□ -1.32
USP11-211ENST00000489111 ZFAND6Q6FIF0 208 aa6.81□□□□□ -1.32
USP11-211ENST00000489111 CHCHD10Q8WYQ3 142 aaPredicted RBP6.81□□□□□ -1.32
USP11-211ENST00000489111 PLEKHB2Q96CS7 222 aa6.81□□□□□ -1.32
USP11-211ENST00000489111 UPK3BQ9BT76 320 aa6.81□□□□□ -1.32
USP11-211ENST00000489111 PRR34Q9NV39 138 aa6.81□□□□□ -1.32
USP11-211ENST00000489111 IGLV10-54A0A075B6I4 117 aa6.8□□□□□ -1.32
USP11-211ENST00000489111 LEPROTO15243 131 aa6.8□□□□□ -1.32
USP11-211ENST00000489111 DDTP30046 118 aa6.8□□□□□ -1.32
USP11-211ENST00000489111 HNRNPA3P51991 378 aaKnown RBP6.8□□□□□ -1.32
USP11-211ENST00000489111 MIAQ16674 131 aa6.8□□□□□ -1.32
USP11-211ENST00000489111 PCP2Q8IVA1 136 aa6.8□□□□□ -1.32
USP11-211ENST00000489111 MUC7Q8TAX7 377 aa6.8□□□□□ -1.32
USP11-211ENST00000489111 DNAH9Q9NYC9 4486 aa6.8□□□□□ -1.32
USP11-211ENST00000489111 TRAV8-3A0A0A6YYJ7 113 aa6.79□□□□□ -1.32
USP11-211ENST00000489111 TRAV8-4A0A0B4J246 113 aa6.79□□□□□ -1.32
USP11-211ENST00000489111 IGHV1-58A0A0C4DH39 117 aa6.79□□□□□ -1.32
USP11-211ENST00000489111 J3QQQ9 107 aa6.79□□□□□ -1.32
USP11-211ENST00000489111 COX7A2LO14548 114 aa6.79□□□□□ -1.32
USP11-211ENST00000489111 CD164L2Q6UWJ8 174 aa6.79□□□□□ -1.32
USP11-211ENST00000489111 C10orf126Q8N4M7 172 aa6.79□□□□□ -1.32
USP11-211ENST00000489111 A0A087WZ39 114 aa6.78□□□□□ -1.32
USP11-211ENST00000489111 IGHV3OR16-9A0A0B4J2B5 98 aa6.78□□□□□ -1.32
USP11-211ENST00000489111 MYMXA0A1B0GTQ4 84 aa6.78□□□□□ -1.32
USP11-211ENST00000489111 ZNF815PA8K554 130 aa6.78□□□□□ -1.32
USP11-211ENST00000489111 SMIM1B2RUZ4 78 aa6.78□□□□□ -1.32
USP11-211ENST00000489111 DLEU1O43261 78 aa6.78□□□□□ -1.32
USP11-211ENST00000489111 MALP21145 153 aa6.78□□□□□ -1.32
USP11-211ENST00000489111 ENHOQ6UWT2 76 aa6.78□□□□□ -1.32
USP11-211ENST00000489111 C5orf38Q86SI9 138 aa6.78□□□□□ -1.32
USP11-211ENST00000489111 BOD1L2Q8IYS8 172 aa6.78□□□□□ -1.32
USP11-211ENST00000489111 WWC2-AS2Q96NR7 200 aa6.78□□□□□ -1.32
USP11-211ENST00000489111 TTTY13Q9BZ97 58 aa6.78□□□□□ -1.32
USP11-211ENST00000489111 TP73-AS1Q9UF72 201 aa6.78□□□□□ -1.32
USP11-211ENST00000489111 PRKDCP78527 4128 aaKnown RBP6.78□□□□□ -1.32
USP11-211ENST00000489111 IGLV5-39A0A0G2JS06 123 aa6.77□□□□□ -1.33
USP11-211ENST00000489111 GAGE12HA6NDE8 117 aa6.77□□□□□ -1.33
USP11-211ENST00000489111 TSPEAR-AS2P59090 65 aa6.77□□□□□ -1.33
USP11-211ENST00000489111 C1orf43Q9BWL3 253 aa6.77□□□□□ -1.33
USP11-211ENST00000489111 Q9H8V8 135 aa6.77□□□□□ -1.33
USP11-211ENST00000489111 K7EP13 123 aa6.76□□□□□ -1.33
USP11-211ENST00000489111 SCGB1D4Q6XE38 83 aa6.76□□□□□ -1.33
USP11-211ENST00000489111 LINC01561Q8N1V8 128 aa6.76□□□□□ -1.33
USP11-211ENST00000489111 RMI2Q96E14 147 aa6.76□□□□□ -1.33
USP11-211ENST00000489111 Q9HAA7 133 aa6.76□□□□□ -1.33
USP11-211ENST00000489111 NDUFA12Q9UI09 145 aa6.76□□□□□ -1.33
USP11-211ENST00000489111 IGKV2D-24A0A075B6R9 120 aa6.75□□□□□ -1.33
USP11-211ENST00000489111 APOMO95445 188 aa6.75□□□□□ -1.33
USP11-211ENST00000489111 PRSS2P07478 247 aa6.75□□□□□ -1.33
USP11-211ENST00000489111 FOXI1Q12951 378 aa6.75□□□□□ -1.33
USP11-211ENST00000489111 MAPKAPK5-AS1Q8N8E1 139 aa6.75□□□□□ -1.33
USP11-211ENST00000489111 COX7B2Q8TF08 81 aa6.75□□□□□ -1.33
USP11-211ENST00000489111 TOMM7Q9P0U1 55 aa6.75□□□□□ -1.33
USP11-211ENST00000489111 IBA57-AS1B1ANH7 110 aa6.74□□□□□ -1.33
USP11-211ENST00000489111 CTAG1AP78358 180 aa6.74□□□□□ -1.33
USP11-211ENST00000489111 TTC32Q5I0X7 151 aa6.74□□□□□ -1.33
USP11-211ENST00000489111 C2orf91Q6ZV80 131 aa6.74□□□□□ -1.33
USP11-211ENST00000489111 ORAOV1Q8WV07 137 aa6.74□□□□□ -1.33
USP11-211ENST00000489111 LINC00587B1AMM8 73 aa6.73□□□□□ -1.33
USP11-211ENST00000489111 NDUFA1O15239 70 aa6.73□□□□□ -1.33
USP11-211ENST00000489111 CFAP161Q6P656 301 aa6.73□□□□□ -1.33
USP11-211ENST00000489111 HIGD1BQ9P298 99 aa6.73□□□□□ -1.33
USP11-211ENST00000489111 C6orf226Q5I0X4 101 aa6.72□□□□□ -1.33
USP11-211ENST00000489111 SFTA2Q6UW10 78 aa6.72□□□□□ -1.33
USP11-211ENST00000489111 Q8IZM0 81 aa6.72□□□□□ -1.33
USP11-211ENST00000489111 TMEM238C9JI98 176 aa6.71□□□□□ -1.34
USP11-211ENST00000489111 CKS1BP61024 79 aa6.71□□□□□ -1.34
USP11-211ENST00000489111 HERV-K104P63124 156 aa6.71□□□□□ -1.34
USP11-211ENST00000489111 SPAG11BQ08648 103 aa6.71□□□□□ -1.34
USP11-211ENST00000489111 HSD52Q0P140 79 aa6.71□□□□□ -1.34
USP11-211ENST00000489111 LCE2DQ5TA82 110 aaPredicted RBP6.71□□□□□ -1.34
USP11-211ENST00000489111 COX11Q9Y6N1 276 aa6.71□□□□□ -1.34
USP11-211ENST00000489111 A0A0J9YXY3 114 aa6.7□□□□□ -1.34
USP11-211ENST00000489111 C3orf84H3BNL1 204 aa6.7□□□□□ -1.34
USP11-211ENST00000489111 M0R143 59 aa6.7□□□□□ -1.34
USP11-211ENST00000489111 CXCL5P42830 114 aa6.7□□□□□ -1.34
USP11-211ENST00000489111 ZNF625Q96I27 306 aaPredicted RBP6.7□□□□□ -1.34
USP11-211ENST00000489111 HIST1H4GQ99525 98 aa6.7□□□□□ -1.34
USP11-211ENST00000489111 TM2D2Q9BX73 214 aa6.7□□□□□ -1.34
USP11-211ENST00000489111 NBDYA0A0U1RRE5 68 aa6.69□□□□□ -1.34
USP11-211ENST00000489111 SRSF9Q13242 221 aaKnown RBP eCLIP6.69□□□□□ -1.34
USP11-211ENST00000489111 CIRBPQ14011 172 aaKnown RBP6.69□□□□□ -1.34
USP11-211ENST00000489111 BATFQ16520 125 aa6.69□□□□□ -1.34
USP11-211ENST00000489111 MEIG1Q5JSS6 88 aa6.69□□□□□ -1.34
USP11-211ENST00000489111 CASC10Q5T4H9 136 aa6.69□□□□□ -1.34
USP11-211ENST00000489111 KRTAP26-1Q6PEX3 210 aa6.69□□□□□ -1.34
USP11-211ENST00000489111 KRTAP1-5Q9BYS1 174 aa6.69□□□□□ -1.34
USP11-211ENST00000489111 ZNF561-AS1K7EIQ3 104 aa6.68□□□□□ -1.34
USP11-211ENST00000489111 HINT1P49773 126 aaPredicted RBP6.68□□□□□ -1.34
USP11-211ENST00000489111 TAL2Q16559 108 aa6.68□□□□□ -1.34
USP11-211ENST00000489111 PSCAO43653 123 aa6.67□□□□□ -1.34
USP11-211ENST00000489111 TIMM17BO60830 172 aa6.67□□□□□ -1.34
USP11-211ENST00000489111 GCSHP23434 173 aa6.67□□□□□ -1.34
USP11-211ENST00000489111 HIGD2BQ4VC39 106 aa6.67□□□□□ -1.34
USP11-211ENST00000489111 SPANXB1Q9NS25 103 aaPredicted RBP6.67□□□□□ -1.34
USP11-211ENST00000489111 LY6G6CO95867 125 aa6.66□□□□□ -1.34
USP11-211ENST00000489111 KIAA0087Q14695 138 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms