RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 C2CD3Q4AC94 2353 aa0.3□□□□□ -2.36
RFC4-213ENST00000489028 PLXNB2O15031 1838 aa0.3□□□□□ -2.36
RFC4-213ENST00000489028 TRBV6-1A0A0K0K1D8 114 aa0.3□□□□□ -2.36
RFC4-213ENST00000489028 FAM223BA6NKX1 122 aa0.3□□□□□ -2.36
RFC4-213ENST00000489028 LINC00032P0C843 101 aa0.3□□□□□ -2.36
RFC4-213ENST00000489028 VAMP8Q9BV40 100 aa0.3□□□□□ -2.36
RFC4-213ENST00000489028 ARHGEF5Q12774 1597 aa0.3□□□□□ -2.36
RFC4-213ENST00000489028 ABCC5O15440 1437 aa0.3□□□□□ -2.36
RFC4-213ENST00000489028 CNTLNQ9NXG0 1405 aa0.3□□□□□ -2.36
RFC4-213ENST00000489028 GOLGA4Q13439 2230 aaKnown RBP0.29□□□□□ -2.36
RFC4-213ENST00000489028 BIVM-ERCC5R4GMW8 1640 aa0.29□□□□□ -2.36
RFC4-213ENST00000489028 WFDC2Q14508 124 aa0.29□□□□□ -2.36
RFC4-213ENST00000489028 C10orf113Q5VZT2 155 aa0.29□□□□□ -2.36
RFC4-213ENST00000489028 U3KQA8 63 aa0.29□□□□□ -2.36
RFC4-213ENST00000489028 TET3O43151 1660 aa0.29□□□□□ -2.36
RFC4-213ENST00000489028 NSD3Q9BZ95 1437 aa0.29□□□□□ -2.36
RFC4-213ENST00000489028 POLA1P09884 1462 aaPredicted RBP0.29□□□□□ -2.36
RFC4-213ENST00000489028 MRC2Q9UBG0 1479 aa0.29□□□□□ -2.36
RFC4-213ENST00000489028 CELSR2Q9HCU4 2923 aa0.28□□□□□ -2.36
RFC4-213ENST00000489028 CC2D2AQ9P2K1 1620 aa0.28□□□□□ -2.36
RFC4-213ENST00000489028 I3L2K1 104 aa0.28□□□□□ -2.36
RFC4-213ENST00000489028 FDCSPQ8NFU4 85 aa0.28□□□□□ -2.36
RFC4-213ENST00000489028 PMCHL2Q9BQD1 86 aa0.28□□□□□ -2.36
RFC4-213ENST00000489028 DPY30Q9C005 99 aa0.28□□□□□ -2.36
RFC4-213ENST00000489028 PLCE1Q9P212 2302 aa0.28□□□□□ -2.36
RFC4-213ENST00000489028 ADGRL2O95490 1459 aa0.28□□□□□ -2.37
RFC4-213ENST00000489028 TOP2BQ02880 1626 aa0.27□□□□□ -2.37
RFC4-213ENST00000489028 FXYD6-FXYD2A0A087WZ82 144 aa0.27□□□□□ -2.37
RFC4-213ENST00000489028 M0R143 59 aa0.27□□□□□ -2.37
RFC4-213ENST00000489028 ATOX1O00244 68 aa0.27□□□□□ -2.37
RFC4-213ENST00000489028 S100A8P05109 93 aa0.27□□□□□ -2.37
RFC4-213ENST00000489028 LINC00846Q9NV44 126 aa0.27□□□□□ -2.37
RFC4-213ENST00000489028 CACFD1Q9UGQ2 172 aa0.27□□□□□ -2.37
RFC4-213ENST00000489028 MAGI1Q96QZ7 1491 aaPredicted RBP0.27□□□□□ -2.37
RFC4-213ENST00000489028 ARHGEF12Q9NZN5 1544 aa0.27□□□□□ -2.37
RFC4-213ENST00000489028 LAMC1P11047 1609 aa0.27□□□□□ -2.37
RFC4-213ENST00000489028 NHSL1Q5SYE7 1610 aa0.27□□□□□ -2.37
RFC4-213ENST00000489028 MYO7BQ6PIF6 2116 aa0.26□□□□□ -2.37
RFC4-213ENST00000489028 FAT4Q6V0I7 4981 aa0.26□□□□□ -2.37
RFC4-213ENST00000489028 TRBV7-4A0A0J9YYF1 115 aa0.26□□□□□ -2.37
RFC4-213ENST00000489028 C10orf142B7Z368 130 aa0.26□□□□□ -2.37
RFC4-213ENST00000489028 MPC2O95563 127 aa0.26□□□□□ -2.37
RFC4-213ENST00000489028 MT-ATP8P03928 68 aa0.26□□□□□ -2.37
RFC4-213ENST00000489028 PMCHL1Q16048 86 aa0.26□□□□□ -2.37
RFC4-213ENST00000489028 Q5VSD8 79 aa0.26□□□□□ -2.37
RFC4-213ENST00000489028 LINC01600Q96MT4 127 aa0.26□□□□□ -2.37
RFC4-213ENST00000489028 GAPVD1Q14C86 1478 aa0.26□□□□□ -2.37
RFC4-213ENST00000489028 TOPAZ1Q8N9V7 1692 aa0.26□□□□□ -2.37
RFC4-213ENST00000489028 AKAP6Q13023 2319 aa0.25□□□□□ -2.37
RFC4-213ENST00000489028 PRDM15P57071 1507 aaPredicted RBP0.25□□□□□ -2.37
RFC4-213ENST00000489028 TEX14Q8IWB6 1497 aa0.25□□□□□ -2.37
RFC4-213ENST00000489028 FYCO1Q9BQS8 1478 aa0.25□□□□□ -2.37
RFC4-213ENST00000489028 TRBV25-1A0A075B6N4 114 aa0.25□□□□□ -2.37
RFC4-213ENST00000489028 A0A0G2JND7 137 aa0.25□□□□□ -2.37
RFC4-213ENST00000489028 C7orf77A4D0Y5 90 aa0.25□□□□□ -2.37
RFC4-213ENST00000489028 NCMAPQ5T1S8 102 aa0.25□□□□□ -2.37
RFC4-213ENST00000489028 OTOGQ6ZRI0 2925 aa0.25□□□□□ -2.37
RFC4-213ENST00000489028 CHD9Q3L8U1 2897 aa0.25□□□□□ -2.37
RFC4-213ENST00000489028 ZFHX3Q15911 3703 aa0.25□□□□□ -2.37
RFC4-213ENST00000489028 GPR98Q8WXG9 6306 aa0.25□□□□□ -2.37
RFC4-213ENST00000489028 NCOR2Q9Y618 2525 aa0.24□□□□□ -2.37
RFC4-213ENST00000489028 MLH3Q9UHC1 1453 aa0.24□□□□□ -2.37
RFC4-213ENST00000489028 VPS8Q8N3P4 1428 aa0.24□□□□□ -2.37
RFC4-213ENST00000489028 ANKRD36BQ8N2N9 1353 aa0.24□□□□□ -2.37
RFC4-213ENST00000489028 UQCRHP07919 91 aa0.24□□□□□ -2.37
RFC4-213ENST00000489028 DEFB109BQ30KR1 87 aa0.24□□□□□ -2.37
RFC4-213ENST00000489028 PSMG4Q5JS54 123 aa0.24□□□□□ -2.37
RFC4-213ENST00000489028 DEFB123Q8N688 67 aa0.24□□□□□ -2.37
RFC4-213ENST00000489028 SERP2Q8N6R1 65 aa0.24□□□□□ -2.37
RFC4-213ENST00000489028 TRGV9Q99603 122 aa0.24□□□□□ -2.37
RFC4-213ENST00000489028 BTAF1O14981 1849 aa0.24□□□□□ -2.37
RFC4-213ENST00000489028 ABCA3Q99758 1704 aa0.24□□□□□ -2.37
RFC4-213ENST00000489028 PAPPAQ13219 1627 aa0.24□□□□□ -2.37
RFC4-213ENST00000489028 PKDREJQ9NTG1 2253 aa0.24□□□□□ -2.37
RFC4-213ENST00000489028 C1orf167Q5SNV9 1468 aa0.23□□□□□ -2.37
RFC4-213ENST00000489028 UNC79Q9P2D8 2635 aa0.23□□□□□ -2.37
RFC4-213ENST00000489028 PTPRQQ9UMZ3 2332 aa0.23□□□□□ -2.37
RFC4-213ENST00000489028 H3BQF6 201 aa0.23□□□□□ -2.37
RFC4-213ENST00000489028 H7BZZ5 65 aa0.23□□□□□ -2.37
RFC4-213ENST00000489028 COX6B1P14854 86 aa0.23□□□□□ -2.37
RFC4-213ENST00000489028 COL5A1-AS1Q5SY13 56 aa0.23□□□□□ -2.37
RFC4-213ENST00000489028 CHD1O14646 1710 aa0.23□□□□□ -2.37
RFC4-213ENST00000489028 LRP1Q07954 4544 aaKnown RBP0.23□□□□□ -2.37
RFC4-213ENST00000489028 USF3Q68DE3 2245 aa0.22□□□□□ -2.37
RFC4-213ENST00000489028 IGSF10Q6WRI0 2623 aa0.22□□□□□ -2.37
RFC4-213ENST00000489028 A0A087WVE0 104 aa0.22□□□□□ -2.37
RFC4-213ENST00000489028 LINC00959A0A1B0GUT2 108 aa0.22□□□□□ -2.37
RFC4-213ENST00000489028 SPRR1AP35321 89 aa0.22□□□□□ -2.37
RFC4-213ENST00000489028 PKIAP61925 76 aa0.22□□□□□ -2.37
RFC4-213ENST00000489028 ZNF292O60281 2723 aa0.22□□□□□ -2.37
RFC4-213ENST00000489028 SETBP1Q9Y6X0 1596 aa0.22□□□□□ -2.37
RFC4-213ENST00000489028 TULP4Q9NRJ4 1543 aa0.22□□□□□ -2.37
RFC4-213ENST00000489028 SCN7AQ01118 1682 aa0.21□□□□□ -2.38
RFC4-213ENST00000489028 LCN9Q8WX39 176 aa0.21□□□□□ -2.38
RFC4-213ENST00000489028 RAPGEF2Q9Y4G8 1499 aa0.21□□□□□ -2.38
RFC4-213ENST00000489028 DOPEY2Q9Y3R5 2298 aa0.21□□□□□ -2.38
RFC4-213ENST00000489028 COL4A6Q14031 1691 aa0.21□□□□□ -2.38
RFC4-213ENST00000489028 CSMD3Q7Z407 3707 aa0.2□□□□□ -2.38
RFC4-213ENST00000489028 ABCC2Q92887 1545 aa0.2□□□□□ -2.38
RFC4-213ENST00000489028 UQCRHLA0A096LP55 91 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms