RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 VSTM2AQ8TAG5 236 aa-1.02□□□□□ -2.57
CCDC93-209ENST00000488908 SMIM4Q8WVI0 70 aa-1.02□□□□□ -2.57
CCDC93-209ENST00000488908 NSD3Q9BZ95 1437 aa-1.02□□□□□ -2.57
CCDC93-209ENST00000488908 LSM2Q9Y333 95 aaKnown RBP-1.02□□□□□ -2.57
CCDC93-209ENST00000488908 XIRP1Q702N8 1843 aaKnown RBP-1.03□□□□□ -2.57
CCDC93-209ENST00000488908 MUC22E2RYF6 1773 aaPredicted RBP-1.03□□□□□ -2.57
CCDC93-209ENST00000488908 ARHGEF5Q12774 1597 aa-1.03□□□□□ -2.57
CCDC93-209ENST00000488908 TRBV20-1A0A075B6N2 111 aa-1.03□□□□□ -2.57
CCDC93-209ENST00000488908 MT1FP04733 61 aa-1.03□□□□□ -2.57
CCDC93-209ENST00000488908 SCTP09683 121 aa-1.03□□□□□ -2.57
CCDC93-209ENST00000488908 ASIPP42127 132 aa-1.03□□□□□ -2.57
CCDC93-209ENST00000488908 TCTE3Q8IZS6 198 aa-1.03□□□□□ -2.57
CCDC93-209ENST00000488908 SKA2Q8WVK7 121 aaPredicted RBP-1.03□□□□□ -2.57
CCDC93-209ENST00000488908 USMG5Q96IX5 58 aa-1.03□□□□□ -2.57
CCDC93-209ENST00000488908 SAR1AQ9NR31 198 aa-1.03□□□□□ -2.57
CCDC93-209ENST00000488908 WDFY3Q8IZQ1 3526 aa-1.03□□□□□ -2.57
CCDC93-209ENST00000488908 LOC400499M0QZD8 3231 aa-1.03□□□□□ -2.57
CCDC93-209ENST00000488908 A0A1B0GV72 72 aa-1.04□□□□□ -2.58
CCDC93-209ENST00000488908 DEFB4AO15263 64 aa-1.04□□□□□ -2.58
CCDC93-209ENST00000488908 PIRTP0C851 137 aa-1.04□□□□□ -2.58
CCDC93-209ENST00000488908 RPS29P62273 56 aaKnown RBP-1.04□□□□□ -2.58
CCDC93-209ENST00000488908 C10orf82Q8WW14 230 aa-1.04□□□□□ -2.58
CCDC93-209ENST00000488908 NAA60Q9H7X0 242 aa-1.04□□□□□ -2.58
CCDC93-209ENST00000488908 SPANXCQ9NY87 97 aa-1.04□□□□□ -2.58
CCDC93-209ENST00000488908 LRRC37A2A6NM11 1700 aa-1.04□□□□□ -2.58
CCDC93-209ENST00000488908 PAPPAQ13219 1627 aa-1.04□□□□□ -2.58
CCDC93-209ENST00000488908 ERCC6Q03468 1493 aa-1.05□□□□□ -2.58
CCDC93-209ENST00000488908 MAGI1Q96QZ7 1491 aaPredicted RBP-1.05□□□□□ -2.58
CCDC93-209ENST00000488908 MYH13Q9UKX3 1938 aa-1.05□□□□□ -2.58
CCDC93-209ENST00000488908 DAPK1P53355 1430 aa-1.05□□□□□ -2.58
CCDC93-209ENST00000488908 MKI67P46013 3256 aaKnown RBP-1.05□□□□□ -2.58
CCDC93-209ENST00000488908 TRAV36DV7A0A075B6V5 113 aa-1.05□□□□□ -2.58
CCDC93-209ENST00000488908 A0A1B0GX51 115 aa-1.05□□□□□ -2.58
CCDC93-209ENST00000488908 H7BZZ5 65 aa-1.05□□□□□ -2.58
CCDC93-209ENST00000488908 G0S2P27469 103 aa-1.05□□□□□ -2.58
CCDC93-209ENST00000488908 S100GP29377 79 aa-1.05□□□□□ -2.58
CCDC93-209ENST00000488908 CMPK1P30085 196 aa-1.05□□□□□ -2.58
CCDC93-209ENST00000488908 TFAMQ00059 246 aaKnown RBP-1.05□□□□□ -2.58
CCDC93-209ENST00000488908 DEFB123Q8N688 67 aa-1.05□□□□□ -2.58
CCDC93-209ENST00000488908 CENPHQ9H3R5 247 aa-1.05□□□□□ -2.58
CCDC93-209ENST00000488908 R4GMQ9 66 aa-1.05□□□□□ -2.58
CCDC93-209ENST00000488908 GAPVD1Q14C86 1478 aa-1.05□□□□□ -2.58
CCDC93-209ENST00000488908 TRAV30A0A087WSZ9 112 aa-1.06□□□□□ -2.58
CCDC93-209ENST00000488908 F8VRH5 84 aa-1.06□□□□□ -2.58
CCDC93-209ENST00000488908 TNFSF15O95150 251 aa-1.06□□□□□ -2.58
CCDC93-209ENST00000488908 GNG10P50151 68 aa-1.06□□□□□ -2.58
CCDC93-209ENST00000488908 CCL18P55774 89 aa-1.06□□□□□ -2.58
CCDC93-209ENST00000488908 NCS1P62166 190 aa-1.06□□□□□ -2.58
CCDC93-209ENST00000488908 UBE2G1P62253 170 aa-1.06□□□□□ -2.58
CCDC93-209ENST00000488908 HEPN1Q6WQI6 88 aa-1.06□□□□□ -2.58
CCDC93-209ENST00000488908 CTAGE3PQ8IX95 158 aa-1.06□□□□□ -2.58
CCDC93-209ENST00000488908 WFDC9Q8NEX5 89 aa-1.06□□□□□ -2.58
CCDC93-209ENST00000488908 SMPXQ9UHP9 88 aa-1.06□□□□□ -2.58
CCDC93-209ENST00000488908 NEFHP12036 1026 aa-1.07□□□□□ -2.58
CCDC93-209ENST00000488908 PIPP12273 146 aaPredicted RBP-1.07□□□□□ -2.58
CCDC93-209ENST00000488908 MMGT1Q8N4V1 131 aa-1.07□□□□□ -2.58
CCDC93-209ENST00000488908 Q8N8P6 123 aa-1.07□□□□□ -2.58
CCDC93-209ENST00000488908 LINC01600Q96MT4 127 aa-1.07□□□□□ -2.58
CCDC93-209ENST00000488908 HIGD1AQ9Y241 93 aa-1.07□□□□□ -2.58
CCDC93-209ENST00000488908 LINC00312Q9Y6C7 94 aa-1.07□□□□□ -2.58
CCDC93-209ENST00000488908 MAP3K1Q13233 1512 aa-1.07□□□□□ -2.58
CCDC93-209ENST00000488908 BCORQ6W2J9 1755 aa-1.07□□□□□ -2.58
CCDC93-209ENST00000488908 MYH8P13535 1937 aa-1.07□□□□□ -2.58
CCDC93-209ENST00000488908 CTXND1A0A1B0GTU2 59 aa-1.08□□□□□ -2.58
CCDC93-209ENST00000488908 CBLN1P23435 193 aa-1.08□□□□□ -2.58
CCDC93-209ENST00000488908 CCL8P80075 99 aa-1.08□□□□□ -2.58
CCDC93-209ENST00000488908 COX17Q14061 63 aa-1.08□□□□□ -2.58
CCDC93-209ENST00000488908 MIC13Q5XKP0 118 aa-1.08□□□□□ -2.58
CCDC93-209ENST00000488908 DPH3Q96FX2 82 aa-1.08□□□□□ -2.58
CCDC93-209ENST00000488908 SPRR4Q96PI1 79 aa-1.08□□□□□ -2.58
CCDC93-209ENST00000488908 MRPL40Q9NQ50 206 aaKnown RBP-1.08□□□□□ -2.58
CCDC93-209ENST00000488908 HSPB11Q9Y547 144 aa-1.08□□□□□ -2.58
CCDC93-209ENST00000488908 V9GYQ6 96 aa-1.08□□□□□ -2.58
CCDC93-209ENST00000488908 POLA1P09884 1462 aaPredicted RBP-1.08□□□□□ -2.58
CCDC93-209ENST00000488908 PXDNQ92626 1479 aa-1.08□□□□□ -2.58
CCDC93-209ENST00000488908 MUC3AQ02505 3323 aa-1.08□□□□□ -2.58
CCDC93-209ENST00000488908 MYOM3Q5VTT5 1437 aa-1.08□□□□□ -2.58
CCDC93-209ENST00000488908 PCNTO95613 3336 aa-1.09□□□□□ -2.58
CCDC93-209ENST00000488908 ABCC10Q5T3U5 1492 aa-1.09□□□□□ -2.58
CCDC93-209ENST00000488908 M0R135 149 aa-1.09□□□□□ -2.58
CCDC93-209ENST00000488908 ARPC5O15511 151 aa-1.09□□□□□ -2.58
CCDC93-209ENST00000488908 PPP1R17O96001 155 aa-1.09□□□□□ -2.58
CCDC93-209ENST00000488908 SCIMPQ6UWF3 145 aa-1.09□□□□□ -2.58
CCDC93-209ENST00000488908 SPTSSBQ8NFR3 76 aa-1.09□□□□□ -2.58
CCDC93-209ENST00000488908 CDC26Q8NHZ8 85 aa-1.09□□□□□ -2.58
CCDC93-209ENST00000488908 MRPL34Q9BQ48 92 aaKnown RBP-1.09□□□□□ -2.58
CCDC93-209ENST00000488908 DDA1Q9BW61 102 aa-1.09□□□□□ -2.58
CCDC93-209ENST00000488908 CDC42SE2Q9NRR3 84 aa-1.09□□□□□ -2.58
CCDC93-209ENST00000488908 SPANXA1Q9NS26 97 aa-1.09□□□□□ -2.58
CCDC93-209ENST00000488908 CDKN2A-AS1Q9UH64 79 aa-1.09□□□□□ -2.58
CCDC93-209ENST00000488908 SZT2Q5T011 3432 aa-1.09□□□□□ -2.58
CCDC93-209ENST00000488908 PRDM2Q13029 1718 aa-1.09□□□□□ -2.58
CCDC93-209ENST00000488908 ARHGEF10O15013 1369 aa-1.09□□□□□ -2.58
CCDC93-209ENST00000488908 SBF2Q86WG5 1849 aa-1.1□□□□□ -2.59
CCDC93-209ENST00000488908 CICQ96RK0 1608 aaPredicted RBP-1.1□□□□□ -2.59
CCDC93-209ENST00000488908 TRBV7-4A0A0J9YYF1 115 aa-1.1□□□□□ -2.59
CCDC93-209ENST00000488908 TSTD3H0UI37 97 aa-1.1□□□□□ -2.59
CCDC93-209ENST00000488908 I3L3M4 83 aa-1.1□□□□□ -2.59
CCDC93-209ENST00000488908 IL5P05113 134 aa-1.1□□□□□ -2.59
CCDC93-209ENST00000488908 DBIP07108 87 aaKnown RBP-1.1□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms