RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 RAB5BP61020 215 aa7.86□□□□□ -1.15
TTC3-221ENST00000488522 RPL39P62891 51 aaKnown RBP7.86□□□□□ -1.15
TTC3-221ENST00000488522 OR5A1Q8NGJ0 315 aa7.86□□□□□ -1.15
TTC3-221ENST00000488522 KRTAP4-6Q9BYQ5 205 aa7.86□□□□□ -1.15
TTC3-221ENST00000488522 AP5S1Q9NUS5 200 aa7.86□□□□□ -1.15
TTC3-221ENST00000488522 UBE2D4Q9Y2X8 147 aa7.86□□□□□ -1.15
TTC3-221ENST00000488522 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.86□□□□□ -1.15
TTC3-221ENST00000488522 CLPSL2Q6UWE3 100 aa7.85□□□□□ -1.15
TTC3-221ENST00000488522 SDIM1Q6ZPB5 146 aa7.85□□□□□ -1.15
TTC3-221ENST00000488522 LINC00269Q8N2A0 174 aa7.85□□□□□ -1.15
TTC3-221ENST00000488522 TIMM21Q9BVV7 248 aa7.85□□□□□ -1.15
TTC3-221ENST00000488522 CYSLTR1Q9Y271 337 aa7.85□□□□□ -1.15
TTC3-221ENST00000488522 CSDC2Q9Y534 153 aaKnown RBP7.85□□□□□ -1.15
TTC3-221ENST00000488522 PANO1I0J062 215 aa7.84□□□□□ -1.15
TTC3-221ENST00000488522 LINC00614P0C842 121 aa7.84□□□□□ -1.15
TTC3-221ENST00000488522 REG3AQ06141 175 aa7.84□□□□□ -1.15
TTC3-221ENST00000488522 C2orf66Q6UXQ4 117 aa7.84□□□□□ -1.15
TTC3-221ENST00000488522 BAGE3Q86Y29 109 aa7.84□□□□□ -1.15
TTC3-221ENST00000488522 SPANXA1Q9NS26 97 aa7.84□□□□□ -1.15
TTC3-221ENST00000488522 CNBPP62633 177 aaKnown RBP7.83□□□□□ -1.16
TTC3-221ENST00000488522 ZNF664Q8N3J9 261 aa7.83□□□□□ -1.16
TTC3-221ENST00000488522 CHCHD1Q96BP2 118 aaKnown RBP7.83□□□□□ -1.16
TTC3-221ENST00000488522 URB1-AS1Q96HZ7 61 aa7.83□□□□□ -1.16
TTC3-221ENST00000488522 Q6ZUT4 128 aa7.82□□□□□ -1.16
TTC3-221ENST00000488522 TOMM6Q96B49 74 aa7.82□□□□□ -1.16
TTC3-221ENST00000488522 CDC42SE2Q9NRR3 84 aa7.82□□□□□ -1.16
TTC3-221ENST00000488522 PYGO1Q9Y3Y4 419 aa7.82□□□□□ -1.16
TTC3-221ENST00000488522 IGKV3OR2-268A0A0C4DH90 116 aa7.81□□□□□ -1.16
TTC3-221ENST00000488522 LINC01549A6NIU2 74 aa7.81□□□□□ -1.16
TTC3-221ENST00000488522 MRPS36P82909 103 aaKnown RBP7.81□□□□□ -1.16
TTC3-221ENST00000488522 C1orf196B1AJZ1 125 aa7.8□□□□□ -1.16
TTC3-221ENST00000488522 HIST1H2BKO60814 126 aa7.8□□□□□ -1.16
TTC3-221ENST00000488522 HSBP1O75506 76 aa7.8□□□□□ -1.16
TTC3-221ENST00000488522 HBDP02042 147 aa7.8□□□□□ -1.16
TTC3-221ENST00000488522 HIST1H2BJP06899 126 aa7.8□□□□□ -1.16
TTC3-221ENST00000488522 HIST1H2BOP23527 126 aa7.8□□□□□ -1.16
TTC3-221ENST00000488522 HIST1H2BBP33778 126 aa7.8□□□□□ -1.16
TTC3-221ENST00000488522 HIST1H2BDP58876 126 aa7.8□□□□□ -1.16
TTC3-221ENST00000488522 HIST1H2BCP62807 126 aa7.8□□□□□ -1.16
TTC3-221ENST00000488522 PMCHL1Q16048 86 aa7.8□□□□□ -1.16
TTC3-221ENST00000488522 HIST2H2BEQ16778 126 aa7.8□□□□□ -1.16
TTC3-221ENST00000488522 RNASE13Q5GAN3 156 aaKnown RBP7.8□□□□□ -1.16
TTC3-221ENST00000488522 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.8□□□□□ -1.16
TTC3-221ENST00000488522 HIST1H2BHQ93079 126 aa7.8□□□□□ -1.16
TTC3-221ENST00000488522 SCGB3A1Q96QR1 104 aa7.8□□□□□ -1.16
TTC3-221ENST00000488522 HIST1H2BNQ99877 126 aa7.8□□□□□ -1.16
TTC3-221ENST00000488522 HIST1H2BMQ99879 126 aa7.8□□□□□ -1.16
TTC3-221ENST00000488522 IGLV10-54A0A075B6I4 117 aa7.79□□□□□ -1.16
TTC3-221ENST00000488522 IGLV4-3A0A075B6K6 122 aa7.79□□□□□ -1.16
TTC3-221ENST00000488522 TRAV8-4A0A0B4J246 113 aa7.79□□□□□ -1.16
TTC3-221ENST00000488522 IGIPA6NJ69 53 aa7.79□□□□□ -1.16
TTC3-221ENST00000488522 SERF1AO75920 110 aa7.79□□□□□ -1.16
TTC3-221ENST00000488522 NPSP0C0P6 89 aa7.79□□□□□ -1.16
TTC3-221ENST00000488522 Q6ZN92 141 aa7.79□□□□□ -1.16
TTC3-221ENST00000488522 ERASQ7Z444 233 aa7.79□□□□□ -1.16
TTC3-221ENST00000488522 TMEM141Q96I45 108 aa7.79□□□□□ -1.16
TTC3-221ENST00000488522 TIMM17AQ99595 171 aa7.79□□□□□ -1.16
TTC3-221ENST00000488522 OPRPNQ99935 248 aaPredicted RBP7.79□□□□□ -1.16
TTC3-221ENST00000488522 A0A096LNJ9 63 aa7.78□□□□□ -1.16
TTC3-221ENST00000488522 SS18Q15532 418 aa7.78□□□□□ -1.16
TTC3-221ENST00000488522 PAPPA-AS1Q5QFB9 102 aa7.78□□□□□ -1.16
TTC3-221ENST00000488522 TEX43Q6ZNM6 134 aa7.78□□□□□ -1.16
TTC3-221ENST00000488522 SPACA4Q8TDM5 124 aa7.78□□□□□ -1.16
TTC3-221ENST00000488522 FAM104AQ969W3 186 aa7.78□□□□□ -1.16
TTC3-221ENST00000488522 LINC00959A0A1B0GUT2 108 aa7.77□□□□□ -1.17
TTC3-221ENST00000488522 IFITM10A6NMD0 228 aa7.77□□□□□ -1.17
TTC3-221ENST00000488522 LINC00310P59036 64 aa7.77□□□□□ -1.17
TTC3-221ENST00000488522 C2orf88Q9BSF0 95 aa7.77□□□□□ -1.17
TTC3-221ENST00000488522 VCX2Q9H322 139 aa7.77□□□□□ -1.17
TTC3-221ENST00000488522 PLAC8Q9NZF1 115 aa7.77□□□□□ -1.17
TTC3-221ENST00000488522 IGHV3-64A0A075B6Q5 118 aa7.76□□□□□ -1.17
TTC3-221ENST00000488522 A0A087WYN8 130 aa7.76□□□□□ -1.17
TTC3-221ENST00000488522 TRAV13-1A0A0B4J241 112 aa7.76□□□□□ -1.17
TTC3-221ENST00000488522 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.76□□□□□ -1.17
TTC3-221ENST00000488522 CCL25O15444 150 aa7.76□□□□□ -1.17
TTC3-221ENST00000488522 XP32Q5T750 250 aa7.76□□□□□ -1.17
TTC3-221ENST00000488522 CHCHD10Q8WYQ3 142 aaPredicted RBP7.76□□□□□ -1.17
TTC3-221ENST00000488522 ATP5LO75964 103 aa7.75□□□□□ -1.17
TTC3-221ENST00000488522 SLPIP03973 132 aa7.75□□□□□ -1.17
TTC3-221ENST00000488522 XCL1P47992 114 aa7.75□□□□□ -1.17
TTC3-221ENST00000488522 PDZD11Q5EBL8 140 aa7.75□□□□□ -1.17
TTC3-221ENST00000488522 FAM19A2Q8N3H0 131 aa7.75□□□□□ -1.17
TTC3-221ENST00000488522 AMELXQ99217 191 aa7.75□□□□□ -1.17
TTC3-221ENST00000488522 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.74□□□□□ -1.17
TTC3-221ENST00000488522 GAGE12HA6NDE8 117 aa7.74□□□□□ -1.17
TTC3-221ENST00000488522 NUPR1O60356 82 aa7.74□□□□□ -1.17
TTC3-221ENST00000488522 NDUFA6P56556 154 aa7.74□□□□□ -1.17
TTC3-221ENST00000488522 LINC00173Q6ZV60 143 aa7.74□□□□□ -1.17
TTC3-221ENST00000488522 LINC01600Q96MT4 127 aa7.74□□□□□ -1.17
TTC3-221ENST00000488522 hDV102S1A0JD36 115 aa7.73□□□□□ -1.17
TTC3-221ENST00000488522 CHTF8P0CG12 524 aa7.73□□□□□ -1.17
TTC3-221ENST00000488522 ZC2HC1BQ5TFG8 222 aa7.73□□□□□ -1.17
TTC3-221ENST00000488522 CD164L2Q6UWJ8 174 aa7.73□□□□□ -1.17
TTC3-221ENST00000488522 LEPROTL1O95214 131 aa7.72□□□□□ -1.17
TTC3-221ENST00000488522 UBE2D1P51668 147 aa7.72□□□□□ -1.17
TTC3-221ENST00000488522 FOXI1Q12951 378 aa7.72□□□□□ -1.17
TTC3-221ENST00000488522 PMVKQ15126 192 aa7.72□□□□□ -1.17
TTC3-221ENST00000488522 COA6Q5JTJ3 125 aaKnown RBP7.72□□□□□ -1.17
TTC3-221ENST00000488522 CST9LQ9H4G1 147 aa7.72□□□□□ -1.17
TTC3-221ENST00000488522 IFI27L1Q96BM0 104 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 188.9 ms