RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 IGKV3D-7A0A0C4DH55 119 aa1.51□□□□□ -2.17
HFM1-208ENST00000488023 IGKV3OR2-268A0A0C4DH90 116 aa1.51□□□□□ -2.17
HFM1-208ENST00000488023 NBDYA0A0U1RRE5 68 aa1.51□□□□□ -2.17
HFM1-208ENST00000488023 MT-ATP8P03928 68 aa1.51□□□□□ -2.17
HFM1-208ENST00000488023 DCDP81605 110 aaKnown RBP1.51□□□□□ -2.17
HFM1-208ENST00000488023 CYP2G1PQ6ZSU1 146 aa1.51□□□□□ -2.17
HFM1-208ENST00000488023 COMMD6Q7Z4G1 85 aa1.51□□□□□ -2.17
HFM1-208ENST00000488023 AMELYQ99218 206 aa1.51□□□□□ -2.17
HFM1-208ENST00000488023 RIF1Q5UIP0 2472 aaKnown RBP1.51□□□□□ -2.17
HFM1-208ENST00000488023 TECTAO75443 2155 aa1.51□□□□□ -2.17
HFM1-208ENST00000488023 PCNX2A6NKB5 2137 aa1.51□□□□□ -2.17
HFM1-208ENST00000488023 COL5A1P20908 1838 aaPredicted RBP1.51□□□□□ -2.17
HFM1-208ENST00000488023 HELZ2Q9BYK8 2649 aaKnown RBP1.51□□□□□ -2.17
HFM1-208ENST00000488023 ARAP2Q8WZ64 1704 aa1.51□□□□□ -2.17
HFM1-208ENST00000488023 UBE2D1P51668 147 aa1.51□□□□□ -2.17
HFM1-208ENST00000488023 CCL8P80075 99 aa1.51□□□□□ -2.17
HFM1-208ENST00000488023 FXYD3Q14802 87 aa1.51□□□□□ -2.17
HFM1-208ENST00000488023 TSLPQ969D9 159 aa1.51□□□□□ -2.17
HFM1-208ENST00000488023 PRRC2BQ5JSZ5 2229 aaKnown RBP1.5□□□□□ -2.17
HFM1-208ENST00000488023 LAMB1P07942 1786 aa1.5□□□□□ -2.17
HFM1-208ENST00000488023 CFAP47Q6ZTR5 3102 aa1.5□□□□□ -2.17
HFM1-208ENST00000488023 BRCA2P51587 3418 aa1.5□□□□□ -2.17
HFM1-208ENST00000488023 GVINP1Q7Z2Y8 2422 aa1.5□□□□□ -2.17
HFM1-208ENST00000488023 MUC3AQ02505 3323 aa1.5□□□□□ -2.17
HFM1-208ENST00000488023 UBA52P62987 128 aaKnown RBP1.5□□□□□ -2.17
HFM1-208ENST00000488023 C20orf197Q8N268 126 aa1.5□□□□□ -2.17
HFM1-208ENST00000488023 LINC00312Q9Y6C7 94 aa1.5□□□□□ -2.17
HFM1-208ENST00000488023 ITPR3Q14573 2671 aa1.5□□□□□ -2.17
HFM1-208ENST00000488023 RP1L1Q8IWN7 2480 aaPredicted RBP1.49□□□□□ -2.17
HFM1-208ENST00000488023 HECTD1Q9ULT8 2610 aa1.49□□□□□ -2.17
HFM1-208ENST00000488023 TEX49A0A1B0GTD5 131 aa1.49□□□□□ -2.17
HFM1-208ENST00000488023 CLPSL1A2RUU4 121 aa1.49□□□□□ -2.17
HFM1-208ENST00000488023 SSSCA1O60232 199 aa1.49□□□□□ -2.17
HFM1-208ENST00000488023 LINC00208Q96KT6 92 aa1.49□□□□□ -2.17
HFM1-208ENST00000488023 DDX60Q8IY21 1712 aaKnown RBP1.49□□□□□ -2.17
HFM1-208ENST00000488023 MKI67P46013 3256 aaKnown RBP1.49□□□□□ -2.17
HFM1-208ENST00000488023 TSC2P49815 1807 aa1.49□□□□□ -2.17
HFM1-208ENST00000488023 CFAP54Q96N23 3096 aa1.49□□□□□ -2.17
HFM1-208ENST00000488023 SPTAN1Q13813 2472 aaKnown RBP1.49□□□□□ -2.17
HFM1-208ENST00000488023 SIX6O95475 246 aa1.48□□□□□ -2.17
HFM1-208ENST00000488023 ATP5EP56381 51 aaPredicted RBP1.48□□□□□ -2.17
HFM1-208ENST00000488023 DPY30Q9C005 99 aa1.48□□□□□ -2.17
HFM1-208ENST00000488023 GNGT2O14610 69 aa1.48□□□□□ -2.17
HFM1-208ENST00000488023 GNG11P61952 73 aa1.48□□□□□ -2.17
HFM1-208ENST00000488023 C5orf56Q8N8D9 126 aa1.48□□□□□ -2.17
HFM1-208ENST00000488023 FAM213BQ8TBF2 198 aa1.48□□□□□ -2.17
HFM1-208ENST00000488023 NFAT5O94916 1531 aa1.48□□□□□ -2.17
HFM1-208ENST00000488023 ZGRF1Q86YA3 2104 aa1.48□□□□□ -2.17
HFM1-208ENST00000488023 DNAH12Q6ZR08 3092 aa1.47□□□□□ -2.17
HFM1-208ENST00000488023 SPTA1P02549 2419 aa1.47□□□□□ -2.17
HFM1-208ENST00000488023 ABCA4P78363 2273 aa1.47□□□□□ -2.17
HFM1-208ENST00000488023 hADV29S1A0JD25 119 aa1.47□□□□□ -2.17
HFM1-208ENST00000488023 CCL3L1P16619 93 aa1.47□□□□□ -2.17
HFM1-208ENST00000488023 C10orf128Q5T292 105 aa1.47□□□□□ -2.17
HFM1-208ENST00000488023 XAF1Q6GPH4 301 aa1.47□□□□□ -2.17
HFM1-208ENST00000488023 ZNF818PQ6ZRF7 136 aa1.47□□□□□ -2.17
HFM1-208ENST00000488023 Q86TA4 180 aa1.47□□□□□ -2.17
HFM1-208ENST00000488023 CYSTM1Q9H1C7 97 aa1.47□□□□□ -2.17
HFM1-208ENST00000488023 Q9H521 79 aa1.47□□□□□ -2.17
HFM1-208ENST00000488023 MED13Q9UHV7 2174 aa1.47□□□□□ -2.17
HFM1-208ENST00000488023 SNRNP200O75643 2136 aaKnown RBP1.47□□□□□ -2.17
HFM1-208ENST00000488023 CACNA1HO95180 2353 aa1.46□□□□□ -2.18
HFM1-208ENST00000488023 PVALEFA0A1B0GWK0 134 aa1.46□□□□□ -2.18
HFM1-208ENST00000488023 FXYD1O00168 92 aa1.46□□□□□ -2.18
HFM1-208ENST00000488023 ESPL1Q14674 2120 aa1.46□□□□□ -2.18
HFM1-208ENST00000488023 DEFB124Q8NES8 71 aa1.46□□□□□ -2.18
HFM1-208ENST00000488023 VAMP8Q9BV40 100 aa1.46□□□□□ -2.18
HFM1-208ENST00000488023 SPAG17Q6Q759 2223 aa1.46□□□□□ -2.18
HFM1-208ENST00000488023 FBN2P35556 2912 aa1.46□□□□□ -2.18
HFM1-208ENST00000488023 LAMA3Q16787 3333 aa1.46□□□□□ -2.18
HFM1-208ENST00000488023 USP34Q70CQ2 3546 aa1.46□□□□□ -2.18
HFM1-208ENST00000488023 POLQO75417 2590 aa1.46□□□□□ -2.18
HFM1-208ENST00000488023 C5orf42Q9H799 3197 aa1.46□□□□□ -2.18
HFM1-208ENST00000488023 OTOGLQ3ZCN5 2332 aa1.46□□□□□ -2.18
HFM1-208ENST00000488023 IGKV2-40A0A087WW87 121 aaPredicted RBP1.45□□□□□ -2.18
HFM1-208ENST00000488023 IGKV2D-40P01614 121 aaPredicted RBP1.45□□□□□ -2.18
HFM1-208ENST00000488023 SSBP1Q04837 148 aaKnown RBP1.45□□□□□ -2.18
HFM1-208ENST00000488023 KRTAP13-1Q8IUC0 172 aa1.45□□□□□ -2.18
HFM1-208ENST00000488023 C4orf33Q8N1A6 199 aa1.45□□□□□ -2.18
HFM1-208ENST00000488023 C9orf62Q8N4C0 152 aa1.45□□□□□ -2.18
HFM1-208ENST00000488023 MYOZ3Q8TDC0 251 aa1.45□□□□□ -2.18
HFM1-208ENST00000488023 COX7B2Q8TF08 81 aa1.45□□□□□ -2.18
HFM1-208ENST00000488023 CCL19Q99731 98 aa1.45□□□□□ -2.18
HFM1-208ENST00000488023 CYP4F30PQ9H0H9 118 aa1.45□□□□□ -2.18
HFM1-208ENST00000488023 AP4S1Q9Y587 144 aa1.45□□□□□ -2.18
HFM1-208ENST00000488023 REV3LO60673 3130 aa1.45□□□□□ -2.18
HFM1-208ENST00000488023 SPG11Q96JI7 2443 aa1.45□□□□□ -2.18
HFM1-208ENST00000488023 CEP250Q9BV73 2442 aa1.45□□□□□ -2.18
HFM1-208ENST00000488023 EDC4Q6P2E9 1401 aaKnown RBP1.45□□□□□ -2.18
HFM1-208ENST00000488023 ZFYVE26Q68DK2 2539 aa1.45□□□□□ -2.18
HFM1-208ENST00000488023 CENPFP49454 3210 aa1.45□□□□□ -2.18
HFM1-208ENST00000488023 H3BQ15 152 aa1.45□□□□□ -2.18
HFM1-208ENST00000488023 LINC00032P0C843 101 aa1.45□□□□□ -2.18
HFM1-208ENST00000488023 ZNF56Q15929 161 aa1.45□□□□□ -2.18
HFM1-208ENST00000488023 PIEZO2Q9H5I5 2752 aa1.44□□□□□ -2.18
HFM1-208ENST00000488023 DOCK1Q14185 1865 aa1.44□□□□□ -2.18
HFM1-208ENST00000488023 DCHS1Q96JQ0 3298 aa1.44□□□□□ -2.18
HFM1-208ENST00000488023 PRUNE2Q8WUY3 3088 aa1.44□□□□□ -2.18
HFM1-208ENST00000488023 PATJQ8NI35 1801 aa1.44□□□□□ -2.18
HFM1-208ENST00000488023 EP300Q09472 2414 aaPredicted RBP1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms