RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 TMEM203Q969S6 136 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 IFI27L1Q96BM0 104 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 CHCHD1Q96BP2 118 aaKnown RBP-0.07□□□□□ -2.42
SMC4-219ENST00000487747 DCUN1D1Q96GG9 259 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 USMG5Q96IX5 58 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 PPP3R2Q96LZ3 170 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 PRELID3AQ96N28 172 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 MCEEQ96PE7 176 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 TP53RKQ96S44 253 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 MGST2Q99735 147 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 CMSS1Q9BQ75 279 aaKnown RBP-0.07□□□□□ -2.42
SMC4-219ENST00000487747 AIF1LQ9BQI0 150 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 OR2H1Q9GZK4 316 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 TMEM191AQ9H0A3 160 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 PCBD2Q9H0N5 130 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 CST11Q9H112 138 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 ATG5Q9H1Y0 275 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 BANF2Q9H503 90 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 RERGLQ9H628 205 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 ST20Q9HBF5 79 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 TAF9BQ9HBM6 251 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 TMEM138Q9NPI0 162 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 OTORQ9NRC9 128 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 LYRM2Q9NU23 88 aaPredicted RBP-0.07□□□□□ -2.42
SMC4-219ENST00000487747 TAS2R8Q9NYW2 309 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 C6orf48Q9UBA6 75 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 LAMTOR3Q9UHA4 124 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 NDUFA12Q9UI09 145 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 SCP2D1Q9UJQ7 156 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 PRNDQ9UKY0 176 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 UTP11Q9Y3A2 253 aaKnown RBP-0.07□□□□□ -2.42
SMC4-219ENST00000487747 NOP16Q9Y3C1 178 aaKnown RBP-0.07□□□□□ -2.42
SMC4-219ENST00000487747 AP4S1Q9Y587 144 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 DNAH11Q96DT5 4516 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 CLTCL1P53675 1640 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 PKD1P98161 4303 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 DNAH1Q9P2D7 4330 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 RYR1P21817 5038 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 CSMD1Q96PZ7 3565 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 FLGP20930 4061 aaPredicted RBP-0.07□□□□□ -2.42
SMC4-219ENST00000487747 DNHD1Q96M86 4753 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 TTC28Q96AY4 2481 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 KMT2AQ03164 3969 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 A0A0G2JMZ2 1700 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 LRRC37AA6NMS7 1700 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 C4AP0C0L4 1744 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 C4BP0C0L5 1744 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 RGPD1P0DJD0 1748 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 SPHKAPQ2M3C7 1700 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 NUP188Q5SRE5 1749 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 PKD1L3Q7Z443 1732 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 NRAPQ86VF7 1730 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 TNS1Q9HBL0 1735 aaKnown RBP-0.07□□□□□ -2.42
SMC4-219ENST00000487747 UNC13AQ9UPW8 1703 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 CRYBG1Q9Y4K1 1723 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 DYNC1H1Q14204 4646 aaKnown RBP-0.07□□□□□ -2.42
SMC4-219ENST00000487747 HYDINQ4G0P3 5121 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 BSNQ9UPA5 3926 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 UBR3Q6ZT12 1888 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 DNAH2Q9P225 4427 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 CACNA1HO95180 2353 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 APOBP04114 4563 aaKnown RBP-0.08□□□□□ -2.42
SMC4-219ENST00000487747 ZFHX3Q15911 3703 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 MROH2AA6NES4 1674 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 C5P01031 1676 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 KIAA1109Q2LD37 5005 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 TOPAZ1Q8N9V7 1692 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 ITSN2Q9NZM3 1697 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 FAM208AQ9UK61 1670 aaKnown RBP-0.08□□□□□ -2.42
SMC4-219ENST00000487747 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.08□□□□□ -2.42
SMC4-219ENST00000487747 PHIPQ8WWQ0 1821 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 ARFGEF1Q9Y6D6 1849 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 HECTD4Q9Y4D8 3996 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 TANC2Q9HCD6 1990 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 ESPL1Q14674 2120 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 CREBBPQ92793 2442 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 DMBT1Q9UGM3 2413 aaPredicted RBP-0.08□□□□□ -2.42
SMC4-219ENST00000487747 SIPA1L3O60292 1781 aaPredicted RBP-0.08□□□□□ -2.42
SMC4-219ENST00000487747 BCORQ6W2J9 1755 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 PLECQ15149 4684 aaKnown RBP-0.08□□□□□ -2.42
SMC4-219ENST00000487747 ALMS1Q8TCU4 4167 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 HELZP42694 1942 aaKnown RBP-0.08□□□□□ -2.42
SMC4-219ENST00000487747 TRAV36DV7A0A075B6V5 113 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 TRAV27A0A087WT01 109 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 A0A087WXM4 84 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 UQCRHLA0A096LP55 91 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.08□□□□□ -2.42
SMC4-219ENST00000487747 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 PIGBOS1A0A0B4J2F0 54 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 C3orf85A0A1B0GTC6 90 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 TEX49A0A1B0GTD5 131 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 CTXND1A0A1B0GTU2 59 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 ETDCA0A1B0GVM5 59 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 A0A1B0GWA3 101 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 hADV29S1A0JD25 119 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 ODAMA1E959 279 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 MAP1LC3B2A6NCE7 125 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 BBIP1A8MTZ0 92 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 A8MWV9 139 aa-0.08□□□□□ -2.42
SMC4-219ENST00000487747 UMAD1C9J7I0 102 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms