RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 ARL11Q969Q4 196 aa-0.76□□□□□ -2.53
CCDC66-221ENST00000487739 SNRNP25Q9BV90 132 aaKnown RBP-0.76□□□□□ -2.53
CCDC66-221ENST00000487739 CPSF1Q10570 1443 aaKnown RBP-0.76□□□□□ -2.53
CCDC66-221ENST00000487739 ARHGEF5Q12774 1597 aa-0.76□□□□□ -2.53
CCDC66-221ENST00000487739 CHD8Q9HCK8 2581 aa-0.77□□□□□ -2.53
CCDC66-221ENST00000487739 SPTA1P02549 2419 aa-0.77□□□□□ -2.53
CCDC66-221ENST00000487739 MYOM1P52179 1685 aa-0.77□□□□□ -2.53
CCDC66-221ENST00000487739 STARD9Q9P2P6 4700 aa-0.77□□□□□ -2.53
CCDC66-221ENST00000487739 DEFB105AQ8NG35 78 aa-0.77□□□□□ -2.53
CCDC66-221ENST00000487739 LINC00470Q9BZP3 86 aa-0.77□□□□□ -2.53
CCDC66-221ENST00000487739 NAA60Q9H7X0 242 aa-0.77□□□□□ -2.53
CCDC66-221ENST00000487739 PCNX1Q96RV3 2341 aa-0.78□□□□□ -2.53
CCDC66-221ENST00000487739 SPINK4O60575 86 aa-0.78□□□□□ -2.53
CCDC66-221ENST00000487739 DEFB123Q8N688 67 aa-0.78□□□□□ -2.53
CCDC66-221ENST00000487739 PAIP2BQ9ULR5 123 aaKnown RBP-0.78□□□□□ -2.53
CCDC66-221ENST00000487739 MBD5Q9P267 1494 aa-0.79□□□□□ -2.54
CCDC66-221ENST00000487739 NSD3Q9BZ95 1437 aa-0.79□□□□□ -2.54
CCDC66-221ENST00000487739 SFT2D2O95562 160 aa-0.79□□□□□ -2.54
CCDC66-221ENST00000487739 SELENOWP63302 87 aa-0.79□□□□□ -2.54
CCDC66-221ENST00000487739 PPP3R2Q96LZ3 170 aa-0.79□□□□□ -2.54
CCDC66-221ENST00000487739 SPANXDQ9BXN6 97 aa-0.79□□□□□ -2.54
CCDC66-221ENST00000487739 POLA1P09884 1462 aaPredicted RBP-0.8□□□□□ -2.54
CCDC66-221ENST00000487739 GAPVD1Q14C86 1478 aa-0.8□□□□□ -2.54
CCDC66-221ENST00000487739 SHANK2Q9UPX8 1470 aa-0.8□□□□□ -2.54
CCDC66-221ENST00000487739 FMN2Q9NZ56 1722 aa-0.8□□□□□ -2.54
CCDC66-221ENST00000487739 QRICH2Q9H0J4 1663 aa-0.8□□□□□ -2.54
CCDC66-221ENST00000487739 CATR1Q13166 79 aa-0.8□□□□□ -2.54
CCDC66-221ENST00000487739 DEFB135Q30KP9 77 aa-0.8□□□□□ -2.54
CCDC66-221ENST00000487739 Q56UQ5 140 aa-0.8□□□□□ -2.54
CCDC66-221ENST00000487739 LINC00474Q9P2X8 69 aa-0.8□□□□□ -2.54
CCDC66-221ENST00000487739 DNAH6Q9C0G6 4158 aa-0.8□□□□□ -2.54
CCDC66-221ENST00000487739 UBR4Q5T4S7 5183 aa-0.81□□□□□ -2.54
CCDC66-221ENST00000487739 TET3O43151 1660 aa-0.81□□□□□ -2.54
CCDC66-221ENST00000487739 GOLGA4Q13439 2230 aaKnown RBP-0.81□□□□□ -2.54
CCDC66-221ENST00000487739 LOC100130705A0A1B0GUX0 176 aa-0.81□□□□□ -2.54
CCDC66-221ENST00000487739 TACC2O95359 2948 aa-0.81□□□□□ -2.54
CCDC66-221ENST00000487739 SPTBN4Q9H254 2564 aa-0.81□□□□□ -2.54
CCDC66-221ENST00000487739 SCN7AQ01118 1682 aa-0.81□□□□□ -2.54
CCDC66-221ENST00000487739 HTTP42858 3142 aa-0.82□□□□□ -2.54
CCDC66-221ENST00000487739 TULP4Q9NRJ4 1543 aa-0.82□□□□□ -2.54
CCDC66-221ENST00000487739 LOC285095A0A1B0GVY8 99 aa-0.82□□□□□ -2.54
CCDC66-221ENST00000487739 NDUFA2O43678 99 aa-0.82□□□□□ -2.54
CCDC66-221ENST00000487739 CCDC58Q4VC31 144 aa-0.82□□□□□ -2.54
CCDC66-221ENST00000487739 MRPL54Q6P161 138 aaKnown RBP-0.82□□□□□ -2.54
CCDC66-221ENST00000487739 COMMD6Q7Z4G1 85 aa-0.82□□□□□ -2.54
CCDC66-221ENST00000487739 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.82□□□□□ -2.54
CCDC66-221ENST00000487739 APLNQ9ULZ1 77 aa-0.82□□□□□ -2.54
CCDC66-221ENST00000487739 HMGXB3Q12766 1538 aa-0.83□□□□□ -2.54
CCDC66-221ENST00000487739 CHKB-CPT1BH3BT56 60 aa-0.83□□□□□ -2.54
CCDC66-221ENST00000487739 MGPP08493 103 aa-0.83□□□□□ -2.54
CCDC66-221ENST00000487739 DEFB112Q30KQ8 113 aa-0.83□□□□□ -2.54
CCDC66-221ENST00000487739 C10orf113Q5VZT2 155 aa-0.83□□□□□ -2.54
CCDC66-221ENST00000487739 C5orf38Q86SI9 138 aa-0.83□□□□□ -2.54
CCDC66-221ENST00000487739 HECTD1Q9ULT8 2610 aa-0.83□□□□□ -2.54
CCDC66-221ENST00000487739 KIAA0556O60303 1618 aa-0.83□□□□□ -2.54
CCDC66-221ENST00000487739 USP9YO00507 2555 aaPredicted RBP-0.84□□□□□ -2.54
CCDC66-221ENST00000487739 EPG5Q9HCE0 2579 aa-0.84□□□□□ -2.54
CCDC66-221ENST00000487739 CUL7Q14999 1698 aa-0.84□□□□□ -2.54
CCDC66-221ENST00000487739 SSSCA1O60232 199 aa-0.84□□□□□ -2.54
CCDC66-221ENST00000487739 APOC2P02655 101 aa-0.84□□□□□ -2.54
CCDC66-221ENST00000487739 IGLC1P0CG04 106 aa-0.84□□□□□ -2.54
CCDC66-221ENST00000487739 BTG2P78543 158 aa-0.84□□□□□ -2.54
CCDC66-221ENST00000487739 C8orf59Q8N0T1 100 aaPredicted RBP-0.84□□□□□ -2.54
CCDC66-221ENST00000487739 MYOZ3Q8TDC0 251 aa-0.84□□□□□ -2.54
CCDC66-221ENST00000487739 TMEM263Q8WUH6 116 aaKnown RBP-0.84□□□□□ -2.54
CCDC66-221ENST00000487739 SPRR2FQ96RM1 72 aa-0.84□□□□□ -2.54
CCDC66-221ENST00000487739 NXT2Q9NPJ8 142 aaKnown RBP-0.84□□□□□ -2.54
CCDC66-221ENST00000487739 FAIMQ9NVQ4 179 aa-0.84□□□□□ -2.54
CCDC66-221ENST00000487739 DNAJC13O75165 2243 aa-0.84□□□□□ -2.54
CCDC66-221ENST00000487739 LAMA1P25391 3075 aa-0.85□□□□□ -2.54
CCDC66-221ENST00000487739 URB1O60287 2271 aaKnown RBP-0.85□□□□□ -2.54
CCDC66-221ENST00000487739 TRBV7-4A0A0J9YYF1 115 aa-0.85□□□□□ -2.55
CCDC66-221ENST00000487739 LINC00959A0A1B0GUT2 108 aa-0.85□□□□□ -2.55
CCDC66-221ENST00000487739 IFNGP01579 166 aa-0.85□□□□□ -2.55
CCDC66-221ENST00000487739 DNAH3Q8TD57 4116 aa-0.85□□□□□ -2.55
CCDC66-221ENST00000487739 SPRR4Q96PI1 79 aa-0.85□□□□□ -2.55
CCDC66-221ENST00000487739 PAPPA2Q9BXP8 1791 aa-0.85□□□□□ -2.55
CCDC66-221ENST00000487739 MAGI1Q96QZ7 1491 aaPredicted RBP-0.86□□□□□ -2.55
CCDC66-221ENST00000487739 SONP18583 2426 aaKnown RBP-0.86□□□□□ -2.55
CCDC66-221ENST00000487739 ITPR3Q14573 2671 aa-0.86□□□□□ -2.55
CCDC66-221ENST00000487739 SYS1-DBNDD2H3BUS1 97 aa-0.86□□□□□ -2.55
CCDC66-221ENST00000487739 UBA52P62987 128 aaKnown RBP-0.86□□□□□ -2.55
CCDC66-221ENST00000487739 FAM223AQ8IWN6 122 aa-0.86□□□□□ -2.55
CCDC66-221ENST00000487739 FDCSPQ8NFU4 85 aa-0.86□□□□□ -2.55
CCDC66-221ENST00000487739 FAM107BQ9H098 131 aa-0.86□□□□□ -2.55
CCDC66-221ENST00000487739 CRIPTQ9P021 101 aa-0.86□□□□□ -2.55
CCDC66-221ENST00000487739 NUP188Q5SRE5 1749 aa-0.86□□□□□ -2.55
CCDC66-221ENST00000487739 NAIPQ13075 1403 aa-0.87□□□□□ -2.55
CCDC66-221ENST00000487739 SMG6Q86US8 1419 aaKnown RBP-0.87□□□□□ -2.55
CCDC66-221ENST00000487739 PRRC2CQ9Y520 2896 aaKnown RBP-0.87□□□□□ -2.55
CCDC66-221ENST00000487739 CPSF4LA6NMK7 179 aaKnown RBP-0.87□□□□□ -2.55
CCDC66-221ENST00000487739 OOSP1A8MZH6 123 aa-0.87□□□□□ -2.55
CCDC66-221ENST00000487739 FGF7P21781 194 aa-0.87□□□□□ -2.55
CCDC66-221ENST00000487739 LYSTQ99698 3801 aa-0.87□□□□□ -2.55
CCDC66-221ENST00000487739 CDC42SE2Q9NRR3 84 aa-0.87□□□□□ -2.55
CCDC66-221ENST00000487739 ARL2-SNX15V9GYD0 113 aa-0.87□□□□□ -2.55
CCDC66-221ENST00000487739 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.87□□□□□ -2.55
CCDC66-221ENST00000487739 TNRC18O15417 2968 aaPredicted RBP-0.87□□□□□ -2.55
CCDC66-221ENST00000487739 PKD1P98161 4303 aa-0.88□□□□□ -2.55
CCDC66-221ENST00000487739 H1FX-AS1Q4G0G2 97 aa-0.88□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms