RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 LINC01551Q86U37 167 aa12.06□□□□□ -0.48
PHF1-208ENST00000486845 SMIM7Q9BQ49 75 aa12.06□□□□□ -0.48
PHF1-208ENST00000486845 OSTCQ9NRP0 149 aa12.06□□□□□ -0.48
PHF1-208ENST00000486845 A0A0U1RQV1 116 aa12.05□□□□□ -0.48
PHF1-208ENST00000486845 RPL13AP40429 203 aaKnown RBP12.05□□□□□ -0.48
PHF1-208ENST00000486845 IGHV3OR16-9A0A0B4J2B5 98 aa12.04□□□□□ -0.48
PHF1-208ENST00000486845 TCAPO15273 167 aa12.04□□□□□ -0.48
PHF1-208ENST00000486845 C10orf25Q5T742 122 aa12.04□□□□□ -0.48
PHF1-208ENST00000486845 UBE2BP63146 152 aa12.03□□□□□ -0.48
PHF1-208ENST00000486845 GAGE2EQ4V326 116 aa12.03□□□□□ -0.48
PHF1-208ENST00000486845 UNQ6190/PRO20217Q6UXQ8 127 aa12.03□□□□□ -0.48
PHF1-208ENST00000486845 SMDT1Q9H4I9 107 aa12.03□□□□□ -0.48
PHF1-208ENST00000486845 C6orf48Q9UBA6 75 aa12.03□□□□□ -0.48
PHF1-208ENST00000486845 GAGE2DQ9UEU5 116 aa12.03□□□□□ -0.48
PHF1-208ENST00000486845 M0QXV9 152 aa12.02□□□□□ -0.49
PHF1-208ENST00000486845 RPL39P62891 51 aaKnown RBP12.02□□□□□ -0.49
PHF1-208ENST00000486845 C20orf78Q9BR46 151 aa12.02□□□□□ -0.49
PHF1-208ENST00000486845 SPANXA1Q9NS26 97 aa12.02□□□□□ -0.49
PHF1-208ENST00000486845 RAB14P61106 215 aa12.01□□□□□ -0.49
PHF1-208ENST00000486845 RPL32P62910 135 aaKnown RBP12.01□□□□□ -0.49
PHF1-208ENST00000486845 MRPL51Q4U2R6 128 aaKnown RBP12.01□□□□□ -0.49
PHF1-208ENST00000486845 V9GYV3 84 aa12.01□□□□□ -0.49
PHF1-208ENST00000486845 IFITM10A6NMD0 228 aa12□□□□□ -0.49
PHF1-208ENST00000486845 MRPS36P82909 103 aaKnown RBP12□□□□□ -0.49
PHF1-208ENST00000486845 FAM104BQ5XKR9 115 aa12□□□□□ -0.49
PHF1-208ENST00000486845 KRTAP7-1Q8IUC3 87 aa12□□□□□ -0.49
PHF1-208ENST00000486845 FAM104AQ969W3 186 aa12□□□□□ -0.49
PHF1-208ENST00000486845 LINC00862A6NCI5 91 aa11.99□□□□□ -0.49
PHF1-208ENST00000486845 ZNF727A8MUV8 499 aa11.99□□□□□ -0.49
PHF1-208ENST00000486845 HBBP68871 147 aa11.99□□□□□ -0.49
PHF1-208ENST00000486845 EIF5A2Q9GZV4 153 aaKnown RBP11.99□□□□□ -0.49
PHF1-208ENST00000486845 CARHSP1Q9Y2V2 147 aaKnown RBP11.99□□□□□ -0.49
PHF1-208ENST00000486845 TRBV24-1A0A075B6N3 115 aa11.98□□□□□ -0.49
PHF1-208ENST00000486845 TGIF2-C20orf24A0A0A6YYL0 155 aa11.98□□□□□ -0.49
PHF1-208ENST00000486845 NAT8BQ9UHF3 227 aa11.98□□□□□ -0.49
PHF1-208ENST00000486845 CKS2P33552 79 aa11.97□□□□□ -0.49
PHF1-208ENST00000486845 CLLU1Q5K131 121 aa11.97□□□□□ -0.49
PHF1-208ENST00000486845 SMIM2Q9BVW6 85 aa11.97□□□□□ -0.49
PHF1-208ENST00000486845 TRBV30A0A0K0K1B3 111 aa11.96□□□□□ -0.49
PHF1-208ENST00000486845 KRTAP9-2Q9BYQ4 174 aa11.96□□□□□ -0.49
PHF1-208ENST00000486845 TNFRSF6BO95407 300 aa11.95□□□□□ -0.5
PHF1-208ENST00000486845 KIAA0087Q14695 138 aa11.95□□□□□ -0.5
PHF1-208ENST00000486845 NDUFC2-KCTD14E9PQ53 114 aa11.94□□□□□ -0.5
PHF1-208ENST00000486845 FAM74A3Q4VXF1 159 aa11.94□□□□□ -0.5
PHF1-208ENST00000486845 A0A1B0GW15 77 aa11.93□□□□□ -0.5
PHF1-208ENST00000486845 PACRGQ96M98 296 aaPredicted RBP11.93□□□□□ -0.5
PHF1-208ENST00000486845 ZNF861PO60384 105 aa11.92□□□□□ -0.5
PHF1-208ENST00000486845 SRP19P09132 144 aaKnown RBP11.92□□□□□ -0.5
PHF1-208ENST00000486845 C9orf129Q5T035 196 aaKnown RBP11.92□□□□□ -0.5
PHF1-208ENST00000486845 C2orf82Q6UX34 121 aa11.91□□□□□ -0.5
PHF1-208ENST00000486845 SMIM27A0A1W2PRY6 76 aa11.9□□□□□ -0.5
PHF1-208ENST00000486845 D6R8Y8 96 aa11.9□□□□□ -0.5
PHF1-208ENST00000486845 IFI27P40305 119 aaPredicted RBP11.9□□□□□ -0.5
PHF1-208ENST00000486845 LINC00242Q5T6M2 205 aa11.9□□□□□ -0.5
PHF1-208ENST00000486845 NUPR1O60356 82 aa11.89□□□□□ -0.51
PHF1-208ENST00000486845 TSPAN13O95857 204 aa11.89□□□□□ -0.51
PHF1-208ENST00000486845 SRSF3P84103 164 aaKnown RBP11.89□□□□□ -0.51
PHF1-208ENST00000486845 F8W036 122 aa11.88□□□□□ -0.51
PHF1-208ENST00000486845 NPYP01303 97 aa11.88□□□□□ -0.51
PHF1-208ENST00000486845 S100A8P05109 93 aa11.88□□□□□ -0.51
PHF1-208ENST00000486845 RPL23P62829 140 aaKnown RBP11.88□□□□□ -0.51
PHF1-208ENST00000486845 PYGO1Q9Y3Y4 419 aa11.88□□□□□ -0.51
PHF1-208ENST00000486845 ADIRFQ15847 76 aa11.87□□□□□ -0.51
PHF1-208ENST00000486845 LINC01561Q8N1V8 128 aa11.87□□□□□ -0.51
PHF1-208ENST00000486845 IGLV4-3A0A075B6K6 122 aa11.86□□□□□ -0.51
PHF1-208ENST00000486845 C9JQL5 133 aa11.86□□□□□ -0.51
PHF1-208ENST00000486845 PPBPP02775 128 aa11.86□□□□□ -0.51
PHF1-208ENST00000486845 RAB5AP20339 215 aa11.86□□□□□ -0.51
PHF1-208ENST00000486845 PEA15Q15121 130 aa11.86□□□□□ -0.51
PHF1-208ENST00000486845 LBHQ53QV2 105 aaPredicted RBP11.85□□□□□ -0.51
PHF1-208ENST00000486845 TMEM141Q96I45 108 aa11.85□□□□□ -0.51
PHF1-208ENST00000486845 PRSS2P07478 247 aa11.84□□□□□ -0.51
PHF1-208ENST00000486845 MRPL54Q6P161 138 aaKnown RBP11.84□□□□□ -0.51
PHF1-208ENST00000486845 C22orf24Q9Y442 160 aa11.84□□□□□ -0.51
PHF1-208ENST00000486845 TEX43Q6ZNM6 134 aa11.83□□□□□ -0.52
PHF1-208ENST00000486845 COMMD7Q86VX2 200 aa11.83□□□□□ -0.52
PHF1-208ENST00000486845 CTDSP1Q9GZU7 261 aa11.83□□□□□ -0.52
PHF1-208ENST00000486845 NAT8Q9UHE5 227 aa11.83□□□□□ -0.52
PHF1-208ENST00000486845 FAT4Q6V0I7 4981 aa11.82□□□□□ -0.52
PHF1-208ENST00000486845 CKS1BP61024 79 aa11.82□□□□□ -0.52
PHF1-208ENST00000486845 LCE2AQ5TA79 106 aaPredicted RBP11.82□□□□□ -0.52
PHF1-208ENST00000486845 ORMDL3Q8N138 153 aa11.82□□□□□ -0.52
PHF1-208ENST00000486845 C2orf88Q9BSF0 95 aa11.82□□□□□ -0.52
PHF1-208ENST00000486845 A0A087X002 238 aa11.81□□□□□ -0.52
PHF1-208ENST00000486845 A0A1B0GXF2 115 aa11.81□□□□□ -0.52
PHF1-208ENST00000486845 CRYGAP11844 174 aa11.81□□□□□ -0.52
PHF1-208ENST00000486845 RPL28P46779 137 aaKnown RBP11.81□□□□□ -0.52
PHF1-208ENST00000486845 Q6ZN92 141 aa11.81□□□□□ -0.52
PHF1-208ENST00000486845 LINC00469Q8N7U9 141 aa11.81□□□□□ -0.52
PHF1-208ENST00000486845 TYMSOSQ8TAI1 123 aa11.81□□□□□ -0.52
PHF1-208ENST00000486845 XAGE1AQ9HD64 81 aa11.8□□□□□ -0.52
PHF1-208ENST00000486845 TOMM7Q9P0U1 55 aa11.8□□□□□ -0.52
PHF1-208ENST00000486845 C6orf226Q5I0X4 101 aa11.79□□□□□ -0.52
PHF1-208ENST00000486845 TMEM136Q6ZRR5 245 aa11.79□□□□□ -0.52
PHF1-208ENST00000486845 PRELID3AQ96N28 172 aa11.79□□□□□ -0.52
PHF1-208ENST00000486845 TP73-AS1Q9UF72 201 aa11.79□□□□□ -0.52
PHF1-208ENST00000486845 BCE1O60756 84 aa11.78□□□□□ -0.52
PHF1-208ENST00000486845 UQCC3Q6UW78 93 aa11.78□□□□□ -0.52
PHF1-208ENST00000486845 Q8IZM0 81 aa11.78□□□□□ -0.52
PHF1-208ENST00000486845 MRPL55Q7Z7F7 128 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms