RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 STAB1Q9NY15 2570 aa14.22□□□□□ -0.13
HPS3-206ENST00000486530 SPANXDQ9BXN6 97 aa14.21□□□□□ -0.13
HPS3-206ENST00000486530 SPANXCQ9NY87 97 aa14.21□□□□□ -0.13
HPS3-206ENST00000486530 CMYA5Q8N3K9 4069 aa14.21□□□□□ -0.13
HPS3-206ENST00000486530 TIMM17BO60830 172 aa14.21□□□□□ -0.14
HPS3-206ENST00000486530 CFC1BP0CG36 223 aa14.21□□□□□ -0.14
HPS3-206ENST00000486530 CFC1P0CG37 223 aa14.21□□□□□ -0.14
HPS3-206ENST00000486530 MUSTN1Q8IVN3 82 aa14.21□□□□□ -0.14
HPS3-206ENST00000486530 NBEAL2Q6ZNJ1 2754 aa14.2□□□□□ -0.14
HPS3-206ENST00000486530 COL6A5A8TX70 2615 aa14.2□□□□□ -0.14
HPS3-206ENST00000486530 IGLV4-60A0A075B6I1 120 aa14.2□□□□□ -0.14
HPS3-206ENST00000486530 F5H768 121 aa14.2□□□□□ -0.14
HPS3-206ENST00000486530 EGFEM1PQ0D2K5 195 aa14.2□□□□□ -0.14
HPS3-206ENST00000486530 A4D1N5 150 aa14.19□□□□□ -0.14
HPS3-206ENST00000486530 ATP5G1P05496 136 aa14.19□□□□□ -0.14
HPS3-206ENST00000486530 SPART-AS1P0CW21 52 aa14.19□□□□□ -0.14
HPS3-206ENST00000486530 CELA1Q9UNI1 258 aa14.19□□□□□ -0.14
HPS3-206ENST00000486530 TSPAN13O95857 204 aa14.18□□□□□ -0.14
HPS3-206ENST00000486530 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.17□□□□□ -0.14
HPS3-206ENST00000486530 MIAQ16674 131 aa14.17□□□□□ -0.14
HPS3-206ENST00000486530 MDFIQ99750 246 aa14.17□□□□□ -0.14
HPS3-206ENST00000486530 A0A0B4J2C4 111 aa14.16□□□□□ -0.14
HPS3-206ENST00000486530 PRO1854Q9UHT4 67 aa14.16□□□□□ -0.14
HPS3-206ENST00000486530 A0A1B0GUV1 79 aa14.16□□□□□ -0.14
HPS3-206ENST00000486530 ADAMTSL4-AS1Q5T5F5 129 aa14.16□□□□□ -0.14
HPS3-206ENST00000486530 TEX48A0A1B0GUV7 120 aa14.15□□□□□ -0.14
HPS3-206ENST00000486530 Q9H8V8 135 aa14.15□□□□□ -0.14
HPS3-206ENST00000486530 TRAV26-1A0A087WT03 109 aa14.14□□□□□ -0.15
HPS3-206ENST00000486530 A0A096LPF7 62 aa14.14□□□□□ -0.15
HPS3-206ENST00000486530 PRSS2P07478 247 aa14.14□□□□□ -0.15
HPS3-206ENST00000486530 CIRBPQ14011 172 aaKnown RBP14.14□□□□□ -0.15
HPS3-206ENST00000486530 LYRM7Q5U5X0 104 aa14.14□□□□□ -0.15
HPS3-206ENST00000486530 IGKV3OR2-268A0A0C4DH90 116 aa14.13□□□□□ -0.15
HPS3-206ENST00000486530 TMEM262E9PQX1 116 aa14.12□□□□□ -0.15
HPS3-206ENST00000486530 IFITM1P13164 125 aa14.12□□□□□ -0.15
HPS3-206ENST00000486530 ZNF625Q96I27 306 aaPredicted RBP14.12□□□□□ -0.15
HPS3-206ENST00000486530 RBX1P62877 108 aa14.12□□□□□ -0.15
HPS3-206ENST00000486530 HERV-K104P63124 156 aa14.11□□□□□ -0.15
HPS3-206ENST00000486530 IGHV3OR16-9A0A0B4J2B5 98 aa14.1□□□□□ -0.15
HPS3-206ENST00000486530 LINC00959A0A1B0GUT2 108 aa14.1□□□□□ -0.15
HPS3-206ENST00000486530 G3V4G9 280 aa14.1□□□□□ -0.15
HPS3-206ENST00000486530 EIF4EBP3O60516 100 aaPredicted RBP14.1□□□□□ -0.15
HPS3-206ENST00000486530 PKD1L1Q8TDX9 2849 aa14.09□□□□□ -0.15
HPS3-206ENST00000486530 LOC107984156A0A0G2JMH3 177 aa14.09□□□□□ -0.15
HPS3-206ENST00000486530 IGHV3-33P01772 117 aa14.09□□□□□ -0.15
HPS3-206ENST00000486530 SH2D6Q7Z4S9 175 aa14.09□□□□□ -0.15
HPS3-206ENST00000486530 ARL17AQ8IVW1 177 aa14.09□□□□□ -0.15
HPS3-206ENST00000486530 H3BMG7 143 aa14.08□□□□□ -0.16
HPS3-206ENST00000486530 MRPL23Q16540 153 aaKnown RBP14.08□□□□□ -0.16
HPS3-206ENST00000486530 COX7B2Q8TF08 81 aa14.08□□□□□ -0.16
HPS3-206ENST00000486530 A0A087WZ39 114 aa14.08□□□□□ -0.16
HPS3-206ENST00000486530 HTN3P15516 51 aa14.08□□□□□ -0.16
HPS3-206ENST00000486530 OCIAD2Q56VL3 154 aa14.08□□□□□ -0.16
HPS3-206ENST00000486530 ERG28Q9UKR5 140 aa14.08□□□□□ -0.16
HPS3-206ENST00000486530 F8W1H4 67 aa14.07□□□□□ -0.16
HPS3-206ENST00000486530 SS18Q15532 418 aa14.07□□□□□ -0.16
HPS3-206ENST00000486530 COPS9Q8WXC6 57 aa14.07□□□□□ -0.16
HPS3-206ENST00000486530 ICOSQ9Y6W8 199 aa14.07□□□□□ -0.16
HPS3-206ENST00000486530 NPC2P61916 151 aa14.06□□□□□ -0.16
HPS3-206ENST00000486530 MEIG1Q5JSS6 88 aa14.06□□□□□ -0.16
HPS3-206ENST00000486530 SFTA2Q6UW10 78 aa14.06□□□□□ -0.16
HPS3-206ENST00000486530 DNAH3Q8TD57 4116 aa14.05□□□□□ -0.16
HPS3-206ENST00000486530 DAND5Q8N907 189 aa14.05□□□□□ -0.16
HPS3-206ENST00000486530 RETNQ9HD89 108 aa14.04□□□□□ -0.16
HPS3-206ENST00000486530 TRBV20-1A0A075B6N2 111 aa14.04□□□□□ -0.16
HPS3-206ENST00000486530 LINC00308Q8TCZ7 52 aa14.04□□□□□ -0.16
HPS3-206ENST00000486530 ANK2Q01484 3957 aa14.03□□□□□ -0.16
HPS3-206ENST00000486530 K7ERU9 68 aa14.02□□□□□ -0.16
HPS3-206ENST00000486530 PSMB2P49721 201 aa14.02□□□□□ -0.16
HPS3-206ENST00000486530 LELP1Q5T871 98 aa14.02□□□□□ -0.16
HPS3-206ENST00000486530 C5orf38Q86SI9 138 aa14.02□□□□□ -0.16
HPS3-206ENST00000486530 TOMM7Q9P0U1 55 aa14.02□□□□□ -0.16
HPS3-206ENST00000486530 Q1RN00 199 aa14.01□□□□□ -0.17
HPS3-206ENST00000486530 C11orf68Q9H3H3 251 aaKnown RBP14.01□□□□□ -0.17
HPS3-206ENST00000486530 H7C2G1 150 aa14.01□□□□□ -0.17
HPS3-206ENST00000486530 SCGB1C2P0DMR2 95 aa14.01□□□□□ -0.17
HPS3-206ENST00000486530 XCL1P47992 114 aa14.01□□□□□ -0.17
HPS3-206ENST00000486530 LINC01561Q8N1V8 128 aa14.01□□□□□ -0.17
HPS3-206ENST00000486530 PPDPFQ9H3Y8 114 aa14.01□□□□□ -0.17
HPS3-206ENST00000486530 PRO0461Q9UI25 63 aa14.01□□□□□ -0.17
HPS3-206ENST00000486530 CLPSL2Q6UWE3 100 aa14□□□□□ -0.17
HPS3-206ENST00000486530 A0A0U1RRA0 63 aa13.99□□□□□ -0.17
HPS3-206ENST00000486530 LINC00269Q8N2A0 174 aa13.99□□□□□ -0.17
HPS3-206ENST00000486530 TCL1BO95988 128 aa13.99□□□□□ -0.17
HPS3-206ENST00000486530 ANGP03950 147 aaKnown RBP13.98□□□□□ -0.17
HPS3-206ENST00000486530 TRBV30A0A0K0K1B3 111 aa13.97□□□□□ -0.17
HPS3-206ENST00000486530 H3BNG1 76 aa13.97□□□□□ -0.17
HPS3-206ENST00000486530 WFDC2Q14508 124 aa13.97□□□□□ -0.17
HPS3-206ENST00000486530 REG3AQ06141 175 aa13.96□□□□□ -0.17
HPS3-206ENST00000486530 SOSTDC1Q6X4U4 206 aa13.96□□□□□ -0.17
HPS3-206ENST00000486530 CD164L2Q6UWJ8 174 aa13.95□□□□□ -0.18
HPS3-206ENST00000486530 MTURNQ8N3F0 131 aa13.95□□□□□ -0.18
HPS3-206ENST00000486530 Q8N3U1 123 aa13.95□□□□□ -0.18
HPS3-206ENST00000486530 RPL13AP40429 203 aaKnown RBP13.94□□□□□ -0.18
HPS3-206ENST00000486530 Q8IZM0 81 aa13.94□□□□□ -0.18
HPS3-206ENST00000486530 IBA57-AS1B1ANH7 110 aa13.93□□□□□ -0.18
HPS3-206ENST00000486530 TRIAP1O43715 76 aa13.93□□□□□ -0.18
HPS3-206ENST00000486530 CHCHD10Q8WYQ3 142 aaPredicted RBP13.93□□□□□ -0.18
HPS3-206ENST00000486530 C6orf226Q5I0X4 101 aa13.93□□□□□ -0.18
HPS3-206ENST00000486530 LYPD5Q6UWN5 251 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms