RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 WNK1Q9H4A3 2382 aa15.94■□□□□ 0.14
CLN5-202ENST00000485938 AKAP9Q99996 3911 aa15.94■□□□□ 0.14
CLN5-202ENST00000485938 UBE2L6O14933 153 aa15.94■□□□□ 0.14
CLN5-202ENST00000485938 FAM218AQ96MZ4 157 aa15.94■□□□□ 0.14
CLN5-202ENST00000485938 C2CD3Q4AC94 2353 aa15.93■□□□□ 0.14
CLN5-202ENST00000485938 BAALC-AS2P0C853 105 aa15.93■□□□□ 0.14
CLN5-202ENST00000485938 C22orf24Q9Y442 160 aa15.93■□□□□ 0.14
CLN5-202ENST00000485938 A0A1W2PRX2 142 aa15.92■□□□□ 0.14
CLN5-202ENST00000485938 C11orf44Q8N8P7 122 aa15.91■□□□□ 0.14
CLN5-202ENST00000485938 TENM4Q6N022 2769 aa15.91■□□□□ 0.14
CLN5-202ENST00000485938 GIG44P09565 113 aaPredicted RBP15.91■□□□□ 0.14
CLN5-202ENST00000485938 DEFB113Q30KQ7 82 aa15.91■□□□□ 0.14
CLN5-202ENST00000485938 CCL24O00175 119 aa15.9■□□□□ 0.14
CLN5-202ENST00000485938 HIST2H2BCQ6DN03 193 aa15.9■□□□□ 0.14
CLN5-202ENST00000485938 PLAC8L1A1L4L8 177 aa15.9■□□□□ 0.14
CLN5-202ENST00000485938 TMEM86BQ8N661 226 aa15.9■□□□□ 0.14
CLN5-202ENST00000485938 LOC100131303A0A0U1RQF7 123 aa15.89■□□□□ 0.13
CLN5-202ENST00000485938 PF4P02776 101 aa15.89■□□□□ 0.13
CLN5-202ENST00000485938 SMCR5Q8TEV8 140 aa15.89■□□□□ 0.13
CLN5-202ENST00000485938 COX7B2Q8TF08 81 aa15.89■□□□□ 0.13
CLN5-202ENST00000485938 APCP25054 2843 aa15.89■□□□□ 0.13
CLN5-202ENST00000485938 TRAV13-2A0A0B4J235 113 aa15.89■□□□□ 0.13
CLN5-202ENST00000485938 TLN2Q9Y4G6 2542 aa15.89■□□□□ 0.13
CLN5-202ENST00000485938 NOTCH3Q9UM47 2321 aa15.88■□□□□ 0.13
CLN5-202ENST00000485938 RPL28P46779 137 aaKnown RBP15.88■□□□□ 0.13
CLN5-202ENST00000485938 FAM222AQ5U5X8 452 aa15.88■□□□□ 0.13
CLN5-202ENST00000485938 MIR7-3HGQ8N6C7 128 aa15.87■□□□□ 0.13
CLN5-202ENST00000485938 CHCHD5Q9BSY4 110 aa15.87■□□□□ 0.13
CLN5-202ENST00000485938 LINC00337Q8N6G1 96 aa15.86■□□□□ 0.13
CLN5-202ENST00000485938 IMUPQ9GZP8 106 aa15.86■□□□□ 0.13
CLN5-202ENST00000485938 ZNF469Q96JG9 3925 aaPredicted RBP15.86■□□□□ 0.13
CLN5-202ENST00000485938 IGKV2-28A0A075B6P5 120 aa15.86■□□□□ 0.13
CLN5-202ENST00000485938 TRGV2A0A075B6R0 118 aa15.86■□□□□ 0.13
CLN5-202ENST00000485938 IGKV2D-28P01615 120 aa15.86■□□□□ 0.13
CLN5-202ENST00000485938 CRPP02741 224 aa15.86■□□□□ 0.13
CLN5-202ENST00000485938 SVIPQ8NHG7 77 aa15.86■□□□□ 0.13
CLN5-202ENST00000485938 C16orf74Q96GX8 76 aa15.86■□□□□ 0.13
CLN5-202ENST00000485938 TRBV6-4A0A1B0GX49 114 aa15.85■□□□□ 0.13
CLN5-202ENST00000485938 SDIM1Q6ZPB5 146 aa15.85■□□□□ 0.13
CLN5-202ENST00000485938 LRRC75A-AS1Q8N1F1 130 aa15.85■□□□□ 0.13
CLN5-202ENST00000485938 DNAJC9-AS1A6NH13 148 aa15.84■□□□□ 0.13
CLN5-202ENST00000485938 LINC00643Q86TS7 51 aa15.84■□□□□ 0.13
CLN5-202ENST00000485938 SND1-IT1Q9HBX3 110 aa15.84■□□□□ 0.13
CLN5-202ENST00000485938 SETXQ7Z333 2677 aaKnown RBP15.84■□□□□ 0.13
CLN5-202ENST00000485938 TOMM7Q9P0U1 55 aa15.83■□□□□ 0.12
CLN5-202ENST00000485938 JMJD1CQ15652 2540 aa15.83■□□□□ 0.12
CLN5-202ENST00000485938 Q9HAA7 133 aa15.83■□□□□ 0.12
CLN5-202ENST00000485938 KRTAP1-3Q8IUG1 177 aa15.82■□□□□ 0.12
CLN5-202ENST00000485938 WFDC10AQ9H1F0 79 aa15.82■□□□□ 0.12
CLN5-202ENST00000485938 IGLV4-60A0A075B6I1 120 aa15.82■□□□□ 0.12
CLN5-202ENST00000485938 IGKV3OR2-268A0A0C4DH90 116 aa15.82■□□□□ 0.12
CLN5-202ENST00000485938 SONP18583 2426 aaKnown RBP15.81■□□□□ 0.12
CLN5-202ENST00000485938 MALP21145 153 aa15.81■□□□□ 0.12
CLN5-202ENST00000485938 IGHV3OR16-9A0A0B4J2B5 98 aa15.8■□□□□ 0.12
CLN5-202ENST00000485938 FAM236AA0A1B0GUQ0 79 aa15.8■□□□□ 0.12
CLN5-202ENST00000485938 FAM236BA0A1B0GV22 79 aa15.8■□□□□ 0.12
CLN5-202ENST00000485938 INAFM2P0DMQ5 153 aa15.8■□□□□ 0.12
CLN5-202ENST00000485938 OVOL2Q9BRP0 275 aa15.8■□□□□ 0.12
CLN5-202ENST00000485938 NF1P21359 2839 aa15.8■□□□□ 0.12
CLN5-202ENST00000485938 TRGV4A0A0C4DH28 118 aa15.8■□□□□ 0.12
CLN5-202ENST00000485938 CMC4P56277 68 aaPredicted RBP15.79■□□□□ 0.12
CLN5-202ENST00000485938 LINC00158P58513 81 aa15.79■□□□□ 0.12
CLN5-202ENST00000485938 RPL35AP18077 110 aaKnown RBP15.79■□□□□ 0.12
CLN5-202ENST00000485938 SMIM11BQ8TCY0 68 aa15.79■□□□□ 0.12
CLN5-202ENST00000485938 TRBV6-8A0A0A6YYG3 113 aa15.78■□□□□ 0.12
CLN5-202ENST00000485938 CCL18P55774 89 aa15.78■□□□□ 0.12
CLN5-202ENST00000485938 CSNK1G2-AS1Q8NCQ2 148 aa15.78■□□□□ 0.12
CLN5-202ENST00000485938 PLA2G2AP14555 144 aa15.78■□□□□ 0.12
CLN5-202ENST00000485938 ESM1Q9NQ30 184 aa15.78■□□□□ 0.12
CLN5-202ENST00000485938 NIPBLQ6KC79 2804 aaeCLIP15.77■□□□□ 0.12
CLN5-202ENST00000485938 C19orf73Q9NVV2 129 aa15.77■□□□□ 0.12
CLN5-202ENST00000485938 FHL2Q14192 279 aa15.77■□□□□ 0.11
CLN5-202ENST00000485938 A0A087WYN8 130 aa15.76■□□□□ 0.11
CLN5-202ENST00000485938 IBA57-AS1B1ANH7 110 aa15.76■□□□□ 0.11
CLN5-202ENST00000485938 A0A087WZ39 114 aa15.76■□□□□ 0.11
CLN5-202ENST00000485938 ITPR3Q14573 2671 aa15.75■□□□□ 0.11
CLN5-202ENST00000485938 GAGE2AQ6NT46 116 aa15.75■□□□□ 0.11
CLN5-202ENST00000485938 CUBNO60494 3623 aa15.74■□□□□ 0.11
CLN5-202ENST00000485938 FAM110AQ9BQ89 295 aa15.74■□□□□ 0.11
CLN5-202ENST00000485938 CCDC168Q8NDH2 2452 aa15.74■□□□□ 0.11
CLN5-202ENST00000485938 DNAL4O96015 105 aa15.72■□□□□ 0.11
CLN5-202ENST00000485938 C5orf38Q86SI9 138 aa15.72■□□□□ 0.11
CLN5-202ENST00000485938 SETD2Q9BYW2 2564 aaPredicted RBP15.72■□□□□ 0.11
CLN5-202ENST00000485938 H0YGX0 51 aa15.72■□□□□ 0.11
CLN5-202ENST00000485938 IGLV1-51P01701 117 aa15.72■□□□□ 0.11
CLN5-202ENST00000485938 PFN2P35080 140 aa15.71■□□□□ 0.11
CLN5-202ENST00000485938 KMT2BQ9UMN6 2715 aaPredicted RBP15.71■□□□□ 0.11
CLN5-202ENST00000485938 CXCL5P42830 114 aa15.71■□□□□ 0.1
CLN5-202ENST00000485938 C9orf129Q5T035 196 aaKnown RBP15.7■□□□□ 0.1
CLN5-202ENST00000485938 WFDC11Q8NEX6 87 aa15.7■□□□□ 0.1
CLN5-202ENST00000485938 LINC00959A0A1B0GUT2 108 aa15.68■□□□□ 0.1
CLN5-202ENST00000485938 LINC01006Q8NI28 216 aa15.68■□□□□ 0.1
CLN5-202ENST00000485938 ATP5G1P05496 136 aa15.67■□□□□ 0.1
CLN5-202ENST00000485938 OBSCN-AS1Q96MR7 158 aa15.67■□□□□ 0.1
CLN5-202ENST00000485938 HELZ2Q9BYK8 2649 aaKnown RBP15.67■□□□□ 0.1
CLN5-202ENST00000485938 PAX4O43316 350 aa15.67■□□□□ 0.1
CLN5-202ENST00000485938 FLNAP21333 2647 aaKnown RBP15.66■□□□□ 0.1
CLN5-202ENST00000485938 C14orf132Q9NPU4 83 aa15.66■□□□□ 0.1
CLN5-202ENST00000485938 LECT2O14960 151 aa15.65■□□□□ 0.1
CLN5-202ENST00000485938 C3orf56Q8N813 242 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms