RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 HIST1H2BMQ99879 126 aa10.16□□□□□ -0.78
RPUSD3-217ENST00000485705 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.15□□□□□ -0.78
RPUSD3-217ENST00000485705 LINC01549A6NIU2 74 aa10.15□□□□□ -0.78
RPUSD3-217ENST00000485705 UBE2D1P51668 147 aa10.15□□□□□ -0.78
RPUSD3-217ENST00000485705 HSBP1O75506 76 aa10.14□□□□□ -0.79
RPUSD3-217ENST00000485705 PRSS1P07477 247 aa10.14□□□□□ -0.79
RPUSD3-217ENST00000485705 COX6A2Q02221 97 aa10.14□□□□□ -0.79
RPUSD3-217ENST00000485705 C5orf38Q86SI9 138 aa10.14□□□□□ -0.79
RPUSD3-217ENST00000485705 C15orf56Q8N910 161 aa10.14□□□□□ -0.79
RPUSD3-217ENST00000485705 C2orf88Q9BSF0 95 aa10.14□□□□□ -0.79
RPUSD3-217ENST00000485705 LINC00242Q5T6M2 205 aa10.13□□□□□ -0.79
RPUSD3-217ENST00000485705 DNAH8Q96JB1 4490 aa10.12□□□□□ -0.79
RPUSD3-217ENST00000485705 IGHV3OR16-9A0A0B4J2B5 98 aa10.12□□□□□ -0.79
RPUSD3-217ENST00000485705 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.12□□□□□ -0.79
RPUSD3-217ENST00000485705 PAPPA-AS1Q5QFB9 102 aa10.12□□□□□ -0.79
RPUSD3-217ENST00000485705 NTN5Q8WTR8 489 aaPredicted RBP10.12□□□□□ -0.79
RPUSD3-217ENST00000485705 PGPEP1Q9NXJ5 209 aa10.12□□□□□ -0.79
RPUSD3-217ENST00000485705 C16orf90A8MZG2 172 aa10.11□□□□□ -0.79
RPUSD3-217ENST00000485705 COX7A2LO14548 114 aa10.11□□□□□ -0.79
RPUSD3-217ENST00000485705 HIGD2BQ4VC39 106 aa10.11□□□□□ -0.79
RPUSD3-217ENST00000485705 C14orf177Q52M58 125 aa10.11□□□□□ -0.79
RPUSD3-217ENST00000485705 CST9LQ9H4G1 147 aa10.11□□□□□ -0.79
RPUSD3-217ENST00000485705 IGLV5-52A0A0A0MRZ9 124 aa10.1□□□□□ -0.79
RPUSD3-217ENST00000485705 ATP5LO75964 103 aa10.1□□□□□ -0.79
RPUSD3-217ENST00000485705 PMVKQ15126 192 aa10.1□□□□□ -0.79
RPUSD3-217ENST00000485705 A0A0J9YXV3 536 aa10.09□□□□□ -0.79
RPUSD3-217ENST00000485705 LOC105371267A0A1B0GV96 52 aa10.09□□□□□ -0.79
RPUSD3-217ENST00000485705 hDV102S1A0JD36 115 aa10.09□□□□□ -0.79
RPUSD3-217ENST00000485705 NDUFA6P56556 154 aa10.09□□□□□ -0.79
RPUSD3-217ENST00000485705 CFAP161Q6P656 301 aa10.09□□□□□ -0.79
RPUSD3-217ENST00000485705 FAM19A3Q7Z5A8 133 aa10.09□□□□□ -0.79
RPUSD3-217ENST00000485705 LINC00526Q96FQ7 95 aa10.09□□□□□ -0.79
RPUSD3-217ENST00000485705 APOBP04114 4563 aaKnown RBP10.09□□□□□ -0.79
RPUSD3-217ENST00000485705 IGHV1-58A0A0C4DH39 117 aa10.08□□□□□ -0.8
RPUSD3-217ENST00000485705 SLPIP03973 132 aa10.08□□□□□ -0.8
RPUSD3-217ENST00000485705 MALP21145 153 aa10.08□□□□□ -0.8
RPUSD3-217ENST00000485705 LINC01620Q4KN68 170 aa10.08□□□□□ -0.8
RPUSD3-217ENST00000485705 CDPF1Q6NVV7 123 aa10.08□□□□□ -0.8
RPUSD3-217ENST00000485705 GVQW2A0A096LPI5 108 aaPredicted RBP10.07□□□□□ -0.8
RPUSD3-217ENST00000485705 IFI27L1Q96BM0 104 aa10.07□□□□□ -0.8
RPUSD3-217ENST00000485705 A0A087WZ39 114 aa10.06□□□□□ -0.8
RPUSD3-217ENST00000485705 KRTAP10-1P60331 282 aa10.06□□□□□ -0.8
RPUSD3-217ENST00000485705 LEPROTL1O95214 131 aa10.05□□□□□ -0.8
RPUSD3-217ENST00000485705 FABP4P15090 132 aa10.05□□□□□ -0.8
RPUSD3-217ENST00000485705 GCSHP23434 173 aa10.05□□□□□ -0.8
RPUSD3-217ENST00000485705 HERVK_113P63121 156 aa10.05□□□□□ -0.8
RPUSD3-217ENST00000485705 COA6Q5JTJ3 125 aaKnown RBP10.05□□□□□ -0.8
RPUSD3-217ENST00000485705 GEMIN7Q9H840 131 aaKnown RBP10.05□□□□□ -0.8
RPUSD3-217ENST00000485705 CDKN2A-AS1Q9UH64 79 aa10.05□□□□□ -0.8
RPUSD3-217ENST00000485705 IGLV4-69A0A075B6H9 119 aa10.04□□□□□ -0.8
RPUSD3-217ENST00000485705 IGHV3-64A0A075B6Q5 118 aa10.04□□□□□ -0.8
RPUSD3-217ENST00000485705 TINCRA0A1B0GVN0 87 aa10.04□□□□□ -0.8
RPUSD3-217ENST00000485705 SEC11AP67812 179 aa10.04□□□□□ -0.8
RPUSD3-217ENST00000485705 ORAOV1Q8WV07 137 aa10.04□□□□□ -0.8
RPUSD3-217ENST00000485705 APOMO95445 188 aa10.03□□□□□ -0.8
RPUSD3-217ENST00000485705 LINC00469Q8N7U9 141 aa10.03□□□□□ -0.8
RPUSD3-217ENST00000485705 HSPG2P98160 4391 aa10.02□□□□□ -0.81
RPUSD3-217ENST00000485705 ZNF561-AS1K7EIQ3 104 aa10.02□□□□□ -0.81
RPUSD3-217ENST00000485705 IGLC3P0DOY3 106 aa10.02□□□□□ -0.81
RPUSD3-217ENST00000485705 CNBPP62633 177 aaKnown RBP10.02□□□□□ -0.81
RPUSD3-217ENST00000485705 SPAG11BQ08648 103 aa10.02□□□□□ -0.81
RPUSD3-217ENST00000485705 IGLV5-45A0A087WSX0 123 aa10.01□□□□□ -0.81
RPUSD3-217ENST00000485705 H0Y8G0 127 aa10.01□□□□□ -0.81
RPUSD3-217ENST00000485705 LINC01561Q8N1V8 128 aa10.01□□□□□ -0.81
RPUSD3-217ENST00000485705 C9orf163Q8N9P6 203 aa10.01□□□□□ -0.81
RPUSD3-217ENST00000485705 CHAC1Q9BUX1 264 aa10.01□□□□□ -0.81
RPUSD3-217ENST00000485705 HSPB8Q9UJY1 196 aa10.01□□□□□ -0.81
RPUSD3-217ENST00000485705 CHTOPQ9Y3Y2 248 aaKnown RBP10.01□□□□□ -0.81
RPUSD3-217ENST00000485705 TRAV12-1A0A0B4J245 112 aa10□□□□□ -0.81
RPUSD3-217ENST00000485705 C11orf86A6NJI1 115 aa10□□□□□ -0.81
RPUSD3-217ENST00000485705 OR10D4PQ8NGN7 298 aa10□□□□□ -0.81
RPUSD3-217ENST00000485705 ZNF22P17026 224 aaPredicted RBP9.99□□□□□ -0.81
RPUSD3-217ENST00000485705 KIAA0087Q14695 138 aa9.99□□□□□ -0.81
RPUSD3-217ENST00000485705 MRPL35Q9NZE8 188 aaKnown RBP9.99□□□□□ -0.81
RPUSD3-217ENST00000485705 FAM30AQ9NZY2 134 aa9.99□□□□□ -0.81
RPUSD3-217ENST00000485705 KIAA1109Q2LD37 5005 aa9.98□□□□□ -0.81
RPUSD3-217ENST00000485705 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.98□□□□□ -0.81
RPUSD3-217ENST00000485705 SMIM1B2RUZ4 78 aa9.98□□□□□ -0.81
RPUSD3-217ENST00000485705 SPINK8P0C7L1 97 aa9.98□□□□□ -0.81
RPUSD3-217ENST00000485705 SYCNQ0VAF6 134 aa9.98□□□□□ -0.81
RPUSD3-217ENST00000485705 ODF1Q14990 250 aa9.98□□□□□ -0.81
RPUSD3-217ENST00000485705 Q6ZRU5 148 aa9.98□□□□□ -0.81
RPUSD3-217ENST00000485705 CARD19Q96LW7 228 aa9.98□□□□□ -0.81
RPUSD3-217ENST00000485705 PACRGQ96M98 296 aaPredicted RBP9.98□□□□□ -0.81
RPUSD3-217ENST00000485705 F8VRH5 84 aa9.97□□□□□ -0.81
RPUSD3-217ENST00000485705 C2orf48Q96LS8 159 aa9.97□□□□□ -0.81
RPUSD3-217ENST00000485705 CAMK2N2Q96S95 79 aa9.97□□□□□ -0.81
RPUSD3-217ENST00000485705 TOMM7Q9P0U1 55 aa9.97□□□□□ -0.81
RPUSD3-217ENST00000485705 C10orf25Q5T742 122 aa9.96□□□□□ -0.82
RPUSD3-217ENST00000485705 SDIM1Q6ZPB5 146 aa9.96□□□□□ -0.82
RPUSD3-217ENST00000485705 MAP1LC3CQ9BXW4 147 aa9.96□□□□□ -0.82
RPUSD3-217ENST00000485705 H3BRM9 83 aa9.95□□□□□ -0.82
RPUSD3-217ENST00000485705 TMEM170BQ5T4T1 132 aa9.95□□□□□ -0.82
RPUSD3-217ENST00000485705 C2orf82Q6UX34 121 aa9.95□□□□□ -0.82
RPUSD3-217ENST00000485705 UNQ6190/PRO20217Q6UXQ8 127 aa9.95□□□□□ -0.82
RPUSD3-217ENST00000485705 PMCHL2Q9BQD1 86 aa9.95□□□□□ -0.82
RPUSD3-217ENST00000485705 HAMPP81172 84 aa9.94□□□□□ -0.82
RPUSD3-217ENST00000485705 SYS1-DBNDD2H3BUS1 97 aa9.93□□□□□ -0.82
RPUSD3-217ENST00000485705 NDUFA1O15239 70 aa9.93□□□□□ -0.82
RPUSD3-217ENST00000485705 PRSS2P07478 247 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms