RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 ANGP03950 147 aaKnown RBP6.56□□□□□ -1.36
CTSA-208ENST00000485627 SS18Q15532 418 aa6.56□□□□□ -1.36
CTSA-208ENST00000485627 DNAH9Q9NYC9 4486 aa6.55□□□□□ -1.36
CTSA-208ENST00000485627 TMEM223A0PJW6 202 aa6.55□□□□□ -1.36
CTSA-208ENST00000485627 LINC00242Q5T6M2 205 aa6.55□□□□□ -1.36
CTSA-208ENST00000485627 FAM19A3Q7Z5A8 133 aa6.55□□□□□ -1.36
CTSA-208ENST00000485627 PLEKHB2Q96CS7 222 aa6.55□□□□□ -1.36
CTSA-208ENST00000485627 IGKV2D-26A0A0A0MRZ7 120 aa6.54□□□□□ -1.36
CTSA-208ENST00000485627 LEPROTO15243 131 aa6.54□□□□□ -1.36
CTSA-208ENST00000485627 CCL25O15444 150 aa6.54□□□□□ -1.36
CTSA-208ENST00000485627 DLEU1O43261 78 aa6.54□□□□□ -1.36
CTSA-208ENST00000485627 LGALS3P17931 250 aaKnown RBP6.54□□□□□ -1.36
CTSA-208ENST00000485627 ESRGQ1W209 222 aa6.54□□□□□ -1.36
CTSA-208ENST00000485627 PCP2Q8IVA1 136 aa6.54□□□□□ -1.36
CTSA-208ENST00000485627 BOD1L2Q8IYS8 172 aa6.54□□□□□ -1.36
CTSA-208ENST00000485627 LINC00269Q8N2A0 174 aa6.54□□□□□ -1.36
CTSA-208ENST00000485627 IGHV3-64A0A075B6Q5 118 aa6.53□□□□□ -1.36
CTSA-208ENST00000485627 LINC00959A0A1B0GUT2 108 aa6.53□□□□□ -1.36
CTSA-208ENST00000485627 LINC00587B1AMM8 73 aa6.53□□□□□ -1.36
CTSA-208ENST00000485627 J3QQQ9 107 aa6.53□□□□□ -1.36
CTSA-208ENST00000485627 SPINK8P0C7L1 97 aa6.53□□□□□ -1.36
CTSA-208ENST00000485627 CCL18P55774 89 aa6.53□□□□□ -1.36
CTSA-208ENST00000485627 CLPSL2Q6UWE3 100 aa6.53□□□□□ -1.36
CTSA-208ENST00000485627 CDKN2A-AS1Q9UH64 79 aa6.53□□□□□ -1.36
CTSA-208ENST00000485627 DYNC2H1Q8NCM8 4307 aaKnown RBP6.53□□□□□ -1.36
CTSA-208ENST00000485627 IGLV5-45A0A087WSX0 123 aa6.52□□□□□ -1.37
CTSA-208ENST00000485627 IGHV1-58A0A0C4DH39 117 aa6.52□□□□□ -1.37
CTSA-208ENST00000485627 MYMXA0A1B0GTQ4 84 aa6.52□□□□□ -1.37
CTSA-208ENST00000485627 ZNF815PA8K554 130 aa6.52□□□□□ -1.37
CTSA-208ENST00000485627 SIVA1O15304 175 aa6.52□□□□□ -1.37
CTSA-208ENST00000485627 IGHV3-30P01768 117 aa6.52□□□□□ -1.37
CTSA-208ENST00000485627 IGHV3-33P01772 117 aa6.52□□□□□ -1.37
CTSA-208ENST00000485627 CRPP02741 224 aa6.52□□□□□ -1.37
CTSA-208ENST00000485627 IGHV3-30-3P0DP02 117 aa6.52□□□□□ -1.37
CTSA-208ENST00000485627 IGHV3-30-5P0DP03 117 aa6.52□□□□□ -1.37
CTSA-208ENST00000485627 CTAG1AP78358 180 aa6.52□□□□□ -1.37
CTSA-208ENST00000485627 COX6A2Q02221 97 aa6.52□□□□□ -1.37
CTSA-208ENST00000485627 REG3AQ06141 175 aa6.52□□□□□ -1.37
CTSA-208ENST00000485627 KLK12Q9UKR0 248 aa6.52□□□□□ -1.37
CTSA-208ENST00000485627 KLK5Q9Y337 293 aaPredicted RBP6.52□□□□□ -1.37
CTSA-208ENST00000485627 MRPS16Q9Y3D3 137 aaKnown RBP6.52□□□□□ -1.37
CTSA-208ENST00000485627 NUPR2A6NF83 97 aa6.51□□□□□ -1.37
CTSA-208ENST00000485627 XCL1P47992 114 aa6.51□□□□□ -1.37
CTSA-208ENST00000485627 SCGB1D4Q6XE38 83 aa6.51□□□□□ -1.37
CTSA-208ENST00000485627 WFDC10BQ8IUB3 73 aa6.51□□□□□ -1.37
CTSA-208ENST00000485627 TTTY13Q9BZ97 58 aa6.51□□□□□ -1.37
CTSA-208ENST00000485627 STAB2Q8WWQ8 2551 aa6.51□□□□□ -1.37
CTSA-208ENST00000485627 TRAV8-3A0A0A6YYJ7 113 aa6.5□□□□□ -1.37
CTSA-208ENST00000485627 Q8N3U1 123 aa6.5□□□□□ -1.37
CTSA-208ENST00000485627 MAPKAPK5-AS1Q8N8E1 139 aa6.5□□□□□ -1.37
CTSA-208ENST00000485627 M0R143 59 aa6.49□□□□□ -1.37
CTSA-208ENST00000485627 LINC01556Q5JQF7 62 aa6.49□□□□□ -1.37
CTSA-208ENST00000485627 CD164L2Q6UWJ8 174 aa6.49□□□□□ -1.37
CTSA-208ENST00000485627 C5orf38Q86SI9 138 aa6.49□□□□□ -1.37
CTSA-208ENST00000485627 CHCHD10Q8WYQ3 142 aaPredicted RBP6.49□□□□□ -1.37
CTSA-208ENST00000485627 UBE2WQ96B02 151 aa6.49□□□□□ -1.37
CTSA-208ENST00000485627 HIGD1BQ9P298 99 aa6.49□□□□□ -1.37
CTSA-208ENST00000485627 TP73-AS1Q9UF72 201 aa6.49□□□□□ -1.37
CTSA-208ENST00000485627 LINC00588Q9Y4M8 146 aa6.49□□□□□ -1.37
CTSA-208ENST00000485627 IGLV10-54A0A075B6I4 117 aa6.48□□□□□ -1.37
CTSA-208ENST00000485627 A0A087WZ39 114 aa6.48□□□□□ -1.37
CTSA-208ENST00000485627 TRAV8-4A0A0B4J246 113 aa6.48□□□□□ -1.37
CTSA-208ENST00000485627 IGHV3OR16-9A0A0B4J2B5 98 aa6.48□□□□□ -1.37
CTSA-208ENST00000485627 SMIM1B2RUZ4 78 aa6.48□□□□□ -1.37
CTSA-208ENST00000485627 TSPEAR-AS2P59090 65 aa6.48□□□□□ -1.37
CTSA-208ENST00000485627 BATFQ16520 125 aa6.48□□□□□ -1.37
CTSA-208ENST00000485627 CASC10Q5T4H9 136 aa6.48□□□□□ -1.37
CTSA-208ENST00000485627 C2orf91Q6ZV80 131 aa6.48□□□□□ -1.37
CTSA-208ENST00000485627 UBE2DNLQ8IWF7 75 aa6.48□□□□□ -1.37
CTSA-208ENST00000485627 PRR34Q9NV39 138 aa6.48□□□□□ -1.37
CTSA-208ENST00000485627 NDUFA12Q9UI09 145 aa6.48□□□□□ -1.37
CTSA-208ENST00000485627 IGLV5-39A0A0G2JS06 123 aa6.47□□□□□ -1.37
CTSA-208ENST00000485627 C3orf84H3BNL1 204 aa6.47□□□□□ -1.37
CTSA-208ENST00000485627 COX7A2LO14548 114 aa6.47□□□□□ -1.37
CTSA-208ENST00000485627 PRSS2P07478 247 aa6.47□□□□□ -1.37
CTSA-208ENST00000485627 DNAH10OSP0CZ25 163 aa6.47□□□□□ -1.37
CTSA-208ENST00000485627 MALP21145 153 aa6.47□□□□□ -1.37
CTSA-208ENST00000485627 HSD52Q0P140 79 aa6.47□□□□□ -1.37
CTSA-208ENST00000485627 MIAQ16674 131 aa6.47□□□□□ -1.37
CTSA-208ENST00000485627 LINC01561Q8N1V8 128 aa6.47□□□□□ -1.37
CTSA-208ENST00000485627 TOMM7Q9P0U1 55 aa6.47□□□□□ -1.37
CTSA-208ENST00000485627 SACSQ9NZJ4 4579 aa6.47□□□□□ -1.37
CTSA-208ENST00000485627 LCE6AA0A183 80 aa6.46□□□□□ -1.38
CTSA-208ENST00000485627 GAGE12HA6NDE8 117 aa6.46□□□□□ -1.38
CTSA-208ENST00000485627 APOMO95445 188 aa6.46□□□□□ -1.38
CTSA-208ENST00000485627 HINT1P49773 126 aaPredicted RBP6.46□□□□□ -1.38
CTSA-208ENST00000485627 SRSF9Q13242 221 aaKnown RBP eCLIP6.46□□□□□ -1.38
CTSA-208ENST00000485627 ZFAND6Q6FIF0 208 aa6.46□□□□□ -1.38
CTSA-208ENST00000485627 ENHOQ6UWT2 76 aa6.46□□□□□ -1.38
CTSA-208ENST00000485627 C10orf126Q8N4M7 172 aa6.46□□□□□ -1.38
CTSA-208ENST00000485627 COX7B2Q8TF08 81 aa6.46□□□□□ -1.38
CTSA-208ENST00000485627 HIST1H4GQ99525 98 aa6.46□□□□□ -1.38
CTSA-208ENST00000485627 UPK3BQ9BT76 320 aa6.46□□□□□ -1.38
CTSA-208ENST00000485627 APLNQ9ULZ1 77 aa6.46□□□□□ -1.38
CTSA-208ENST00000485627 NDUFA1O15239 70 aa6.45□□□□□ -1.38
CTSA-208ENST00000485627 TAL2Q16559 108 aa6.45□□□□□ -1.38
CTSA-208ENST00000485627 C6orf226Q5I0X4 101 aa6.45□□□□□ -1.38
CTSA-208ENST00000485627 C1orf43Q9BWL3 253 aa6.45□□□□□ -1.38
CTSA-208ENST00000485627 TMEM238C9JI98 176 aa6.44□□□□□ -1.38
CTSA-208ENST00000485627 HERV-K104P63124 156 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms