RNA–Protein interactions for RNA: ENST00000484552.5

CAST-210, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-210ENST00000484552 ZNF355PQ9NSJ1 428 aa5.6□□□□□ -1.51
CAST-210ENST00000484552 IGHV3-21A0A0B4J1V1 117 aa5.6□□□□□ -1.51
CAST-210ENST00000484552 LOC101927531A0A1B0GV80 90 aa5.6□□□□□ -1.51
CAST-210ENST00000484552 IGLV2-23P01705 113 aa5.6□□□□□ -1.51
CAST-210ENST00000484552 IGLV3-1P01715 115 aa5.6□□□□□ -1.51
CAST-210ENST00000484552 Q8NDZ9 215 aa5.6□□□□□ -1.51
CAST-210ENST00000484552 MED12Q93074 2177 aa5.59□□□□□ -1.51
CAST-210ENST00000484552 FLNCQ14315 2725 aa5.59□□□□□ -1.51
CAST-210ENST00000484552 IGKV3D-15A0A087WSY6 115 aa5.59□□□□□ -1.51
CAST-210ENST00000484552 K7ERS5 55 aa5.59□□□□□ -1.51
CAST-210ENST00000484552 TRGV3P03979 118 aa5.59□□□□□ -1.51
CAST-210ENST00000484552 ZNF407Q9C0G0 2248 aa5.59□□□□□ -1.52
CAST-210ENST00000484552 IGHV4-4A0A075B6R2 117 aa5.58□□□□□ -1.52
CAST-210ENST00000484552 A6NED7 52 aa5.58□□□□□ -1.52
CAST-210ENST00000484552 D6R8Y8 96 aa5.58□□□□□ -1.52
CAST-210ENST00000484552 LY6HO94772 140 aa5.58□□□□□ -1.52
CAST-210ENST00000484552 MSMBP08118 114 aa5.58□□□□□ -1.52
CAST-210ENST00000484552 FXYD3Q14802 87 aa5.58□□□□□ -1.52
CAST-210ENST00000484552 Q1RN00 199 aa5.58□□□□□ -1.52
CAST-210ENST00000484552 MUSTN1Q8IVN3 82 aa5.58□□□□□ -1.52
CAST-210ENST00000484552 TMEM254Q8TBM7 123 aa5.58□□□□□ -1.52
CAST-210ENST00000484552 TTTY12Q9BZ98 90 aa5.58□□□□□ -1.52
CAST-210ENST00000484552 S4R3C0 116 aa5.58□□□□□ -1.52
CAST-210ENST00000484552 HIGD1CA8MV81 97 aa5.57□□□□□ -1.52
CAST-210ENST00000484552 M0R135 149 aa5.57□□□□□ -1.52
CAST-210ENST00000484552 KRTAP19-1Q8IUB9 90 aa5.57□□□□□ -1.52
CAST-210ENST00000484552 NPBQ8NG41 125 aa5.57□□□□□ -1.52
CAST-210ENST00000484552 MYO7BQ6PIF6 2116 aa5.57□□□□□ -1.52
CAST-210ENST00000484552 TET2Q6N021 2002 aaPredicted RBP5.57□□□□□ -1.52
CAST-210ENST00000484552 MRPL33O75394 65 aaKnown RBP5.57□□□□□ -1.52
CAST-210ENST00000484552 BAALC-AS2P0C853 105 aa5.57□□□□□ -1.52
CAST-210ENST00000484552 TIMM8BQ9Y5J9 83 aaPredicted RBP5.57□□□□□ -1.52
CAST-210ENST00000484552 ICOSQ9Y6W8 199 aa5.57□□□□□ -1.52
CAST-210ENST00000484552 CNTRLQ7Z7A1 2325 aa5.57□□□□□ -1.52
CAST-210ENST00000484552 PTPN13Q12923 2485 aa5.57□□□□□ -1.52
CAST-210ENST00000484552 LRRK2Q5S007 2527 aa5.56□□□□□ -1.52
CAST-210ENST00000484552 RNASE13Q5GAN3 156 aaKnown RBP5.56□□□□□ -1.52
CAST-210ENST00000484552 UBALD1Q8TB05 177 aa5.56□□□□□ -1.52
CAST-210ENST00000484552 C1orf147Q96MC9 270 aaPredicted RBP5.56□□□□□ -1.52
CAST-210ENST00000484552 KIF25-AS1Q9Y6Z4 181 aa5.56□□□□□ -1.52
CAST-210ENST00000484552 DOCK10Q96BY6 2186 aa5.56□□□□□ -1.52
CAST-210ENST00000484552 IGHV7-4-1A0A0J9YVY3 117 aa5.55□□□□□ -1.52
CAST-210ENST00000484552 A0A0J9YXY3 114 aa5.55□□□□□ -1.52
CAST-210ENST00000484552 A0A0J9YY99 117 aa5.55□□□□□ -1.52
CAST-210ENST00000484552 CYSRT1A8MQ03 144 aa5.55□□□□□ -1.52
CAST-210ENST00000484552 A8MWP4 228 aa5.55□□□□□ -1.52
CAST-210ENST00000484552 LHBP01229 141 aa5.55□□□□□ -1.52
CAST-210ENST00000484552 ZNF575Q86XF7 245 aa5.55□□□□□ -1.52
CAST-210ENST00000484552 IGHV4-30-2A0A087WSY4 118 aa5.55□□□□□ -1.52
CAST-210ENST00000484552 TRAV12-1A0A0B4J245 112 aa5.55□□□□□ -1.52
CAST-210ENST00000484552 PROP1O75360 226 aa5.55□□□□□ -1.52
CAST-210ENST00000484552 TFF1P04155 84 aa5.55□□□□□ -1.52
CAST-210ENST00000484552 PATE4P0C8F1 98 aa5.55□□□□□ -1.52
CAST-210ENST00000484552 DEFB109BQ30KR1 87 aa5.55□□□□□ -1.52
CAST-210ENST00000484552 C9orf66Q5T8R8 295 aa5.55□□□□□ -1.52
CAST-210ENST00000484552 C1orf64Q8NEQ6 169 aa5.55□□□□□ -1.52
CAST-210ENST00000484552 KRTAP4-7Q9BYR0 210 aa5.55□□□□□ -1.52
CAST-210ENST00000484552 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.55□□□□□ -1.52
CAST-210ENST00000484552 U3KQK5 164 aa5.55□□□□□ -1.52
CAST-210ENST00000484552 COX6B1P14854 86 aa5.54□□□□□ -1.52
CAST-210ENST00000484552 LECT2O14960 151 aa5.53□□□□□ -1.52
CAST-210ENST00000484552 SAA2P0DJI9 122 aaPredicted RBP5.53□□□□□ -1.52
CAST-210ENST00000484552 C7orf33Q8WU49 177 aa5.53□□□□□ -1.52
CAST-210ENST00000484552 NAV2Q8IVL1 2488 aa5.53□□□□□ -1.52
CAST-210ENST00000484552 RTTNQ86VV8 2226 aa5.52□□□□□ -1.53
CAST-210ENST00000484552 NBPF19A0A087WUL8 3843 aa5.52□□□□□ -1.53
CAST-210ENST00000484552 IGHV3-49A0A0A0MS15 119 aa5.52□□□□□ -1.53
CAST-210ENST00000484552 KRTAP23-1A1A580 65 aa5.52□□□□□ -1.53
CAST-210ENST00000484552 FDCSPQ8NFU4 85 aa5.52□□□□□ -1.53
CAST-210ENST00000484552 LINC00846Q9NV44 126 aa5.52□□□□□ -1.53
CAST-210ENST00000484552 USP9XQ93008 2570 aaPredicted RBP5.52□□□□□ -1.53
CAST-210ENST00000484552 TRAV40A0A0B4J280 105 aa5.52□□□□□ -1.53
CAST-210ENST00000484552 IGLV2-14P01704 120 aa5.52□□□□□ -1.53
CAST-210ENST00000484552 ARHGAP5-AS1Q96IT6 56 aa5.52□□□□□ -1.53
CAST-210ENST00000484552 USP9YO00507 2555 aaPredicted RBP5.52□□□□□ -1.53
CAST-210ENST00000484552 IGLV8-61A0A075B6I0 122 aa5.51□□□□□ -1.53
CAST-210ENST00000484552 IGHV4OR15-8A0A075B7B6 117 aa5.51□□□□□ -1.53
CAST-210ENST00000484552 F8VRH5 84 aa5.51□□□□□ -1.53
CAST-210ENST00000484552 RPP21Q9H633 154 aaKnown RBP5.51□□□□□ -1.53
CAST-210ENST00000484552 DHRS4-AS1Q9P1J3 65 aa5.51□□□□□ -1.53
CAST-210ENST00000484552 NBASA2RRP1 2371 aa5.51□□□□□ -1.53
CAST-210ENST00000484552 IGLV1-50A0A075B6I6 118 aa5.5□□□□□ -1.53
CAST-210ENST00000484552 IGLV4-3A0A075B6K6 122 aa5.5□□□□□ -1.53
CAST-210ENST00000484552 FSHBP01225 129 aa5.5□□□□□ -1.53
CAST-210ENST00000484552 LYZL1Q6UWQ5 148 aa5.5□□□□□ -1.53
CAST-210ENST00000484552 Q6ZSN1 163 aa5.5□□□□□ -1.53
CAST-210ENST00000484552 OBSCN-AS1Q96MR7 158 aa5.5□□□□□ -1.53
CAST-210ENST00000484552 CHCHD7Q9BUK0 85 aa5.5□□□□□ -1.53
CAST-210ENST00000484552 TMEM167BQ9NRX6 74 aa5.5□□□□□ -1.53
CAST-210ENST00000484552 PRRC2CQ9Y520 2896 aaKnown RBP5.5□□□□□ -1.53
CAST-210ENST00000484552 SVILO95425 2214 aa5.5□□□□□ -1.53
CAST-210ENST00000484552 UNC79Q9P2D8 2635 aa5.5□□□□□ -1.53
CAST-210ENST00000484552 UTP20O75691 2785 aaKnown RBP5.5□□□□□ -1.53
CAST-210ENST00000484552 A0A087WW49 117 aa5.5□□□□□ -1.53
CAST-210ENST00000484552 TRAV12-3A0A0B4J271 114 aa5.5□□□□□ -1.53
CAST-210ENST00000484552 ARL14EPLP0DKL9 152 aa5.5□□□□□ -1.53
CAST-210ENST00000484552 Q6ZQT0 140 aa5.5□□□□□ -1.53
CAST-210ENST00000484552 TEX15Q9BXT5 2789 aa5.5□□□□□ -1.53
CAST-210ENST00000484552 NDUFA4L2Q9NRX3 87 aa5.5□□□□□ -1.53
CAST-210ENST00000484552 DEFA4P12838 97 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms