RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 AKIRIN2Q53H80 203 aa-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 FAM74A4Q5TZK3 123 aa-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 ENHOQ6UWT2 76 aa-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 C2orf82Q6UX34 121 aa-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 HEPN1Q6WQI6 88 aa-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 AKAP14Q86UN6 197 aa-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 OR8I2Q8N0Y5 310 aa-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 TCTEX1D1Q8N7M0 179 aa-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 TSTD1Q8NFU3 115 aa-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 DYNLRB2Q8TF09 96 aa-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 BTF3L4Q96K17 158 aa-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 SLC25A21Q9BQT8 299 aaPredicted RBP-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 CCDC32Q9BV29 185 aa-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 DDA1Q9BW61 102 aa-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 CCDC94Q9BW85 323 aaPredicted RBP-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 MRPL35Q9NZE8 188 aaKnown RBP-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 HIGD1BQ9P298 99 aa-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 CDKN2A-AS1Q9UH64 79 aa-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 STOML2Q9UJZ1 356 aa-0.52□□□□□ -2.49
CCDC66-219ENST00000484441 EFCAB5A4FU69 1503 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 ANKARQ7Z5J8 1434 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 CCDC171Q6TFL3 1326 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 TRAV27A0A087WT01 109 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 TRBV7-7A0A0K0K1E9 115 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 PNMA8CA0A1B0GUJ8 204 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 OR4C46A6NHA9 309 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 OOSP1A8MZH6 123 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 JMJD7-PLA2G4BH0Y9G9 81 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 HMGN4O00479 90 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 CDC42EP2O14613 210 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 NPFFO15130 113 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 RER1O15258 196 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 HMGB3O15347 200 aaKnown RBP-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 SIX6O95475 246 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 TCRAP04437 139 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 OR10J4P0C629 311 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 CD79AP11912 226 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 PIPP12273 146 aaPredicted RBP-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 IDO1P14902 403 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 RPS3P23396 243 aaKnown RBP eCLIP-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 RAB5CP51148 216 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 SPCS3P61009 180 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 REEP5Q00765 189 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 EDDM3AQ14507 147 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 MSMO1Q15800 293 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 OCIAD2Q56VL3 154 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 MIC13Q5XKP0 118 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 DHRS4L2Q6PKH6 230 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 UNQ5815/PRO19632Q6UWF5 114 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 ALKAL2Q6UX46 152 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 SLC25A26Q70HW3 274 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 MUSTN1Q8IVN3 82 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 OR5AS1Q8N127 324 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 LINC00269Q8N2A0 174 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 TMEM254Q8TBM7 123 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 NEK7Q8TDX7 302 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 FAM172AQ8WUF8 416 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 PTH2Q96A98 100 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 MCEEQ96PE7 176 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 CIB3Q96Q77 187 aaPredicted RBP-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 CMSS1Q9BQ75 279 aaKnown RBP-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 PRO1933Q9H354 126 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 NPVFQ9HCQ7 196 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 FKBP11Q9NYL4 201 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 ATPIF1Q9UII2 106 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 BOKQ9UMX3 212 aaPredicted RBP-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 SLC22A13Q9Y226 551 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 NOSIPQ9Y314 301 aaKnown RBP-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 UTP11Q9Y3A2 253 aaKnown RBP-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 PPLO60437 1756 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 CLTCQ00610 1675 aaKnown RBP-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 TTC37Q6PGP7 1564 aa-0.53□□□□□ -2.49
CCDC66-219ENST00000484441 PRXQ9BXM0 1461 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 CCNB3Q8WWL7 1395 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 A0A0G2JND7 137 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 TRBV7-6A0A0J9YX20 115 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 TMEM30CPA0ZSE6 113 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 C7orf77A4D0Y5 90 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 PRORSD1PA6NEY8 169 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 D6R8Y8 96 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 C17orf112F2Z3M2 114 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 F8VRH5 84 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 H3BUA1 57 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 J3KT08 172 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 TPST1O60507 370 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 SULT1C4O75897 302 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 NDUFA3O95167 84 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 APODP05090 189 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 SERPINE1P05121 402 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 IAPPP10997 89 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 SLC25A4P12235 298 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 RPL7P18124 248 aaKnown RBP-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 ADCYAP1P18509 176 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 S100A3P33764 101 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 SULT1A1P50225 295 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 CAV3P56539 151 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 AP3S2P59780 193 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 DEFB131AP59861 70 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 NCALDP61601 193 aa-0.54□□□□□ -2.5
CCDC66-219ENST00000484441 ARF6P62330 175 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms