RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 HECTD4Q9Y4D8 3996 aa-0.19□□□□□ -2.44
SCAF11-207ENST00000484275 UQCR11O14957 56 aa-0.19□□□□□ -2.44
SCAF11-207ENST00000484275 APOC3P02656 99 aa-0.19□□□□□ -2.44
SCAF11-207ENST00000484275 TPPP2P59282 170 aa-0.19□□□□□ -2.44
SCAF11-207ENST00000484275 BTG2P78543 158 aa-0.19□□□□□ -2.44
SCAF11-207ENST00000484275 TMEM170BQ5T4T1 132 aa-0.19□□□□□ -2.44
SCAF11-207ENST00000484275 MGST2Q99735 147 aa-0.19□□□□□ -2.44
SCAF11-207ENST00000484275 DYNLRB1Q9NP97 96 aa-0.19□□□□□ -2.44
SCAF11-207ENST00000484275 NDUFA4L2Q9NRX3 87 aa-0.19□□□□□ -2.44
SCAF11-207ENST00000484275 WDR7Q9Y4E6 1490 aa-0.19□□□□□ -2.44
SCAF11-207ENST00000484275 CELSR3Q9NYQ7 3312 aa-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 MAP1BP46821 2468 aaKnown RBP-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 ZFHX4Q86UP3 3567 aa-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 TOPAZ1Q8N9V7 1692 aa-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 A2ML1A8K2U0 1454 aa-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 SHANK2Q9UPX8 1470 aa-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 A0A0G2JMZ2 1700 aa-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 DSPP15924 2871 aaKnown RBP-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 XRN1Q8IZH2 1706 aaKnown RBP-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 ABCA3Q99758 1704 aa-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 TRBV6-1A0A0K0K1D8 114 aa-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 S100A12P80511 92 aa-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 PIGYQ3MUY2 71 aa-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 MEIG1Q5JSS6 88 aa-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 Q6JHZ5 121 aa-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 BAGE2Q86Y30 109 aa-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 PPP3R2Q96LZ3 170 aa-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 DNAH1Q9P2D7 4330 aa-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 FASNP49327 2511 aaKnown RBP-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 LAMA3Q16787 3333 aa-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 FLGP20930 4061 aaPredicted RBP-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 KIAA0556O60303 1618 aa-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 PDCD11Q14690 1871 aaKnown RBP-0.2□□□□□ -2.44
SCAF11-207ENST00000484275 USP9YO00507 2555 aaPredicted RBP-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 WNK1Q9H4A3 2382 aa-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 MYO15AQ9UKN7 3530 aa-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 TRBV7-3A0A075B6L6 115 aa-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 FXYD6-FXYD2A0A087WZ82 144 aa-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 LOC285095A0A1B0GVY8 99 aa-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 MIF4GDA9UHW6 222 aaKnown RBP-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 F8VRH5 84 aa-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 PRM1P04553 51 aa-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 FGF7P21781 194 aa-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 CCDC58Q4VC31 144 aa-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 Q56UQ5 140 aa-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 TSC22D3Q99576 134 aa-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 LINC00472Q9H8W2 130 aa-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 NRKQ7Z2Y5 1582 aa-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 MGAM2Q2M2H8 2515 aa-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 KTN1Q86UP2 1357 aaKnown RBP-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 TNRC18O15417 2968 aaPredicted RBP-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 CUBNO60494 3623 aa-0.21□□□□□ -2.44
SCAF11-207ENST00000484275 LAMA1P25391 3075 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 GAPVD1Q14C86 1478 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 EHBP1L1Q8N3D4 1523 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 TULP4Q9NRJ4 1543 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 MYO18BQ8IUG5 2567 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 EPG5Q9HCE0 2579 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 ANKRD36A6QL64 1941 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 CC2D2AQ9P2K1 1620 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 NDUFA2O43678 99 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 SSSCA1O60232 199 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 GNG7O60262 68 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 APOC2P02655 101 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 KRTAP20-1Q3LI63 56 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 C8orf59Q8N0T1 100 aaPredicted RBP-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 C1orf54Q8WWF1 131 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 SPANXDQ9BXN6 97 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 LINC01558Q9Y6Z2 57 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 WDR87Q6ZQQ6 2873 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 DNAH7Q8WXX0 4024 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 KIAA1551Q9HCM1 1747 aa-0.22□□□□□ -2.44
SCAF11-207ENST00000484275 A0A0C4DFX4 3053 aa-0.22□□□□□ -2.45
SCAF11-207ENST00000484275 PKD1P98161 4303 aa-0.22□□□□□ -2.45
SCAF11-207ENST00000484275 MYOM2P54296 1465 aa-0.22□□□□□ -2.45
SCAF11-207ENST00000484275 MAGI1Q96QZ7 1491 aaPredicted RBP-0.22□□□□□ -2.45
SCAF11-207ENST00000484275 SPHKAPQ2M3C7 1700 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 FMN2Q9NZ56 1722 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 COL14A1Q05707 1796 aaKnown RBP-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 PAPPA2Q9BXP8 1791 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 NBPF19A0A087WUL8 3843 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 IGLC7A0M8Q6 106 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 K7EP13 123 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 HMGN4O00479 90 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 TNFP01375 233 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 IFNGP01579 166 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 HMGN1P05114 100 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 COX6B1P14854 86 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 CATR1Q13166 79 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 COMMD6Q7Z4G1 85 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 C5orf38Q86SI9 138 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 FAM107BQ9H098 131 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 VPS13BQ7Z7G8 4022 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 MYO9AB2RTY4 2548 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 MRC2Q9UBG0 1479 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 HMGXB3Q12766 1538 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 TEX15Q9BXT5 2789 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 NF1P21359 2839 aa-0.23□□□□□ -2.45
SCAF11-207ENST00000484275 MXRA5Q9NR99 2828 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms