RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 SPRR2EP22531 72 aa-1.04□□□□□ -2.58
PMS1-219ENST00000483293 MGST2Q99735 147 aa-1.04□□□□□ -2.58
PMS1-219ENST00000483293 SNRNP25Q9BV90 132 aaKnown RBP-1.04□□□□□ -2.58
PMS1-219ENST00000483293 RIMS1Q86UR5 1692 aaKnown RBP-1.04□□□□□ -2.58
PMS1-219ENST00000483293 TCHHQ07283 1943 aa-1.05□□□□□ -2.58
PMS1-219ENST00000483293 BTAF1O14981 1849 aa-1.05□□□□□ -2.58
PMS1-219ENST00000483293 LINC00470Q9BZP3 86 aa-1.05□□□□□ -2.58
PMS1-219ENST00000483293 PRRC2CQ9Y520 2896 aaKnown RBP-1.06□□□□□ -2.58
PMS1-219ENST00000483293 TRBV7-3A0A075B6L6 115 aa-1.06□□□□□ -2.58
PMS1-219ENST00000483293 LOC730098B7Z3J9 87 aa-1.06□□□□□ -2.58
PMS1-219ENST00000483293 RYR2Q92736 4967 aa-1.07□□□□□ -2.58
PMS1-219ENST00000483293 NIPBLQ6KC79 2804 aaeCLIP-1.07□□□□□ -2.58
PMS1-219ENST00000483293 NAA60Q9H7X0 242 aa-1.07□□□□□ -2.58
PMS1-219ENST00000483293 HTTP42858 3142 aa-1.08□□□□□ -2.58
PMS1-219ENST00000483293 DNAH3Q8TD57 4116 aa-1.08□□□□□ -2.58
PMS1-219ENST00000483293 SPRR1BP22528 89 aa-1.08□□□□□ -2.58
PMS1-219ENST00000483293 SPRR2AP35326 72 aa-1.08□□□□□ -2.58
PMS1-219ENST00000483293 TPPP2P59282 170 aa-1.08□□□□□ -2.58
PMS1-219ENST00000483293 FXYD6Q9H0Q3 95 aa-1.08□□□□□ -2.58
PMS1-219ENST00000483293 WDR7Q9Y4E6 1490 aa-1.08□□□□□ -2.58
PMS1-219ENST00000483293 MYO18BQ8IUG5 2567 aa-1.08□□□□□ -2.58
PMS1-219ENST00000483293 FASNP49327 2511 aaKnown RBP-1.09□□□□□ -2.58
PMS1-219ENST00000483293 LAMA1P25391 3075 aa-1.09□□□□□ -2.58
PMS1-219ENST00000483293 DNAJC13O75165 2243 aa-1.09□□□□□ -2.58
PMS1-219ENST00000483293 CNOT1A5YKK6 2376 aaKnown RBP-1.09□□□□□ -2.58
PMS1-219ENST00000483293 HMGN4O00479 90 aa-1.09□□□□□ -2.58
PMS1-219ENST00000483293 COX6B1P14854 86 aa-1.09□□□□□ -2.58
PMS1-219ENST00000483293 SELENOWP63302 87 aa-1.09□□□□□ -2.58
PMS1-219ENST00000483293 CATR1Q13166 79 aa-1.09□□□□□ -2.58
PMS1-219ENST00000483293 CCDC58Q4VC31 144 aa-1.09□□□□□ -2.58
PMS1-219ENST00000483293 CPSF1Q10570 1443 aaKnown RBP-1.09□□□□□ -2.58
PMS1-219ENST00000483293 PRKDCP78527 4128 aaKnown RBP-1.09□□□□□ -2.58
PMS1-219ENST00000483293 KDM5AP29375 1690 aaKnown RBP-1.1□□□□□ -2.58
PMS1-219ENST00000483293 PPP3R2Q96LZ3 170 aa-1.1□□□□□ -2.59
PMS1-219ENST00000483293 LINC01558Q9Y6Z2 57 aa-1.1□□□□□ -2.59
PMS1-219ENST00000483293 LAMA3Q16787 3333 aa-1.1□□□□□ -2.59
PMS1-219ENST00000483293 FAT3Q8TDW7 4589 aa-1.1□□□□□ -2.59
PMS1-219ENST00000483293 PKHD1L1Q86WI1 4243 aa-1.11□□□□□ -2.59
PMS1-219ENST00000483293 VPS13DQ5THJ4 4388 aa-1.12□□□□□ -2.59
PMS1-219ENST00000483293 Q56UQ5 140 aa-1.12□□□□□ -2.59
PMS1-219ENST00000483293 FAM107BQ9H098 131 aa-1.12□□□□□ -2.59
PMS1-219ENST00000483293 WDR87Q6ZQQ6 2873 aa-1.12□□□□□ -2.59
PMS1-219ENST00000483293 TEP1Q99973 2627 aaKnown RBP-1.12□□□□□ -2.59
PMS1-219ENST00000483293 ARHGEF12Q9NZN5 1544 aa-1.13□□□□□ -2.59
PMS1-219ENST00000483293 TEX15Q9BXT5 2789 aa-1.13□□□□□ -2.59
PMS1-219ENST00000483293 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.13□□□□□ -2.59
PMS1-219ENST00000483293 RNF213Q63HN8 5207 aa-1.13□□□□□ -2.59
PMS1-219ENST00000483293 MBD5Q9P267 1494 aa-1.13□□□□□ -2.59
PMS1-219ENST00000483293 ANKRD11Q6UB99 2663 aaPredicted RBP-1.13□□□□□ -2.59
PMS1-219ENST00000483293 NDUFA2O43678 99 aa-1.14□□□□□ -2.59
PMS1-219ENST00000483293 SFT2D2O95562 160 aa-1.14□□□□□ -2.59
PMS1-219ENST00000483293 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.14□□□□□ -2.59
PMS1-219ENST00000483293 SPANXDQ9BXN6 97 aa-1.14□□□□□ -2.59
PMS1-219ENST00000483293 COL12A1Q99715 3063 aa-1.14□□□□□ -2.59
PMS1-219ENST00000483293 CUBNO60494 3623 aa-1.14□□□□□ -2.59
PMS1-219ENST00000483293 KLK9Q2XQG4 91 aa-1.15□□□□□ -2.59
PMS1-219ENST00000483293 DNAH2Q9P225 4427 aa-1.16□□□□□ -2.59
PMS1-219ENST00000483293 LOC100130705A0A1B0GUX0 176 aa-1.16□□□□□ -2.6
PMS1-219ENST00000483293 DSPP15924 2871 aaKnown RBP-1.16□□□□□ -2.6
PMS1-219ENST00000483293 ROBO1Q9Y6N7 1651 aa-1.16□□□□□ -2.6
PMS1-219ENST00000483293 POLA1P09884 1462 aaPredicted RBP-1.17□□□□□ -2.6
PMS1-219ENST00000483293 APOC2P02655 101 aa-1.17□□□□□ -2.6
PMS1-219ENST00000483293 SPRR2FQ96RM1 72 aa-1.17□□□□□ -2.6
PMS1-219ENST00000483293 TSC22D3Q99576 134 aa-1.17□□□□□ -2.6
PMS1-219ENST00000483293 LINC00474Q9P2X8 69 aa-1.17□□□□□ -2.6
PMS1-219ENST00000483293 PKD1P98161 4303 aa-1.18□□□□□ -2.6
PMS1-219ENST00000483293 LOC285095A0A1B0GVY8 99 aa-1.18□□□□□ -2.6
PMS1-219ENST00000483293 MRPL54Q6P161 138 aaKnown RBP-1.18□□□□□ -2.6
PMS1-219ENST00000483293 PCNX1Q96RV3 2341 aa-1.18□□□□□ -2.6
PMS1-219ENST00000483293 RAPGEF6Q8TEU7 1601 aa-1.18□□□□□ -2.6
PMS1-219ENST00000483293 KALRNO60229 2985 aa-1.19□□□□□ -2.6
PMS1-219ENST00000483293 ANK3Q12955 4377 aaKnown RBP-1.19□□□□□ -2.6
PMS1-219ENST00000483293 CHKB-CPT1BH3BT56 60 aa-1.19□□□□□ -2.6
PMS1-219ENST00000483293 COMMD6Q7Z4G1 85 aa-1.19□□□□□ -2.6
PMS1-219ENST00000483293 C5orf38Q86SI9 138 aa-1.19□□□□□ -2.6
PMS1-219ENST00000483293 ZFHX3Q15911 3703 aa-1.19□□□□□ -2.6
PMS1-219ENST00000483293 SHANK2Q9UPX8 1470 aa-1.19□□□□□ -2.6
PMS1-219ENST00000483293 NAIPQ13075 1403 aa-1.2□□□□□ -2.6
PMS1-219ENST00000483293 NSD3Q9BZ95 1437 aa-1.2□□□□□ -2.6
PMS1-219ENST00000483293 IFNGP01579 166 aa-1.2□□□□□ -2.6
PMS1-219ENST00000483293 C8orf59Q8N0T1 100 aaPredicted RBP-1.2□□□□□ -2.6
PMS1-219ENST00000483293 SHROOM2Q13796 1616 aa-1.2□□□□□ -2.6
PMS1-219ENST00000483293 MYOM1P52179 1685 aa-1.2□□□□□ -2.6
PMS1-219ENST00000483293 CELSR3Q9NYQ7 3312 aa-1.21□□□□□ -2.6
PMS1-219ENST00000483293 AKAP13Q12802 2813 aa-1.21□□□□□ -2.6
PMS1-219ENST00000483293 MYOZ3Q8TDC0 251 aa-1.21□□□□□ -2.6
PMS1-219ENST00000483293 USP9XQ93008 2570 aaPredicted RBP-1.21□□□□□ -2.6
PMS1-219ENST00000483293 SPTBN4Q9H254 2564 aa-1.21□□□□□ -2.6
PMS1-219ENST00000483293 ARHGEF5Q12774 1597 aa-1.21□□□□□ -2.6
PMS1-219ENST00000483293 A0A0C4DFX4 3053 aa-1.22□□□□□ -2.6
PMS1-219ENST00000483293 SSSCA1O60232 199 aa-1.22□□□□□ -2.6
PMS1-219ENST00000483293 MGPP08493 103 aa-1.22□□□□□ -2.6
PMS1-219ENST00000483293 DEFB123Q8N688 67 aa-1.22□□□□□ -2.6
PMS1-219ENST00000483293 FAIMQ9NVQ4 179 aa-1.22□□□□□ -2.6
PMS1-219ENST00000483293 DMXL1Q9Y485 3027 aa-1.23□□□□□ -2.61
PMS1-219ENST00000483293 AKAP9Q99996 3911 aa-1.23□□□□□ -2.61
PMS1-219ENST00000483293 DNHD1Q96M86 4753 aa-1.23□□□□□ -2.61
PMS1-219ENST00000483293 VPS13BQ7Z7G8 4022 aa-1.23□□□□□ -2.61
PMS1-219ENST00000483293 BTG2P78543 158 aa-1.23□□□□□ -2.61
PMS1-219ENST00000483293 GAPVD1Q14C86 1478 aa-1.24□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms