RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 SCGB1D1O95968 90 aa5.56□□□□□ -1.52
USP4-210ENST00000483212 ANGP03950 147 aaKnown RBP5.56□□□□□ -1.52
USP4-210ENST00000483212 SMIM6P0DI80 62 aa5.56□□□□□ -1.52
USP4-210ENST00000483212 LINC00242Q5T6M2 205 aa5.56□□□□□ -1.52
USP4-210ENST00000483212 ENHOQ6UWT2 76 aa5.56□□□□□ -1.52
USP4-210ENST00000483212 LINC00269Q8N2A0 174 aa5.56□□□□□ -1.52
USP4-210ENST00000483212 C2orf88Q9BSF0 95 aa5.56□□□□□ -1.52
USP4-210ENST00000483212 KLK12Q9UKR0 248 aa5.56□□□□□ -1.52
USP4-210ENST00000483212 HYDINQ4G0P3 5121 aa5.55□□□□□ -1.52
USP4-210ENST00000483212 TRAV13-1A0A0B4J241 112 aa5.55□□□□□ -1.52
USP4-210ENST00000483212 TINCRA0A1B0GVN0 87 aa5.55□□□□□ -1.52
USP4-210ENST00000483212 DPM2O94777 84 aa5.55□□□□□ -1.52
USP4-210ENST00000483212 IGKCP01834 107 aa5.55□□□□□ -1.52
USP4-210ENST00000483212 ZNF22P17026 224 aaPredicted RBP5.55□□□□□ -1.52
USP4-210ENST00000483212 PLNP26678 52 aa5.55□□□□□ -1.52
USP4-210ENST00000483212 COX6A2Q02221 97 aa5.55□□□□□ -1.52
USP4-210ENST00000483212 REG3AQ06141 175 aa5.55□□□□□ -1.52
USP4-210ENST00000483212 CLPSL2Q6UWE3 100 aa5.55□□□□□ -1.52
USP4-210ENST00000483212 ATOH7Q8N100 152 aa5.55□□□□□ -1.52
USP4-210ENST00000483212 KRTAP1-5Q9BYS1 174 aa5.55□□□□□ -1.52
USP4-210ENST00000483212 Q9H8V8 135 aa5.55□□□□□ -1.52
USP4-210ENST00000483212 RYR2Q92736 4967 aa5.55□□□□□ -1.52
USP4-210ENST00000483212 MAJINQ3KP22 176 aa5.54□□□□□ -1.52
USP4-210ENST00000483212 KRTAP26-1Q6PEX3 210 aa5.54□□□□□ -1.52
USP4-210ENST00000483212 UBE2DNLQ8IWF7 75 aa5.54□□□□□ -1.52
USP4-210ENST00000483212 CHAC1Q9BUX1 264 aa5.54□□□□□ -1.52
USP4-210ENST00000483212 DNAH2Q9P225 4427 aa5.53□□□□□ -1.52
USP4-210ENST00000483212 DNAH10Q8IVF4 4471 aa5.53□□□□□ -1.52
USP4-210ENST00000483212 IGHV3OR16-9A0A0B4J2B5 98 aa5.53□□□□□ -1.52
USP4-210ENST00000483212 IGKV3OR2-268A0A0C4DH90 116 aa5.53□□□□□ -1.52
USP4-210ENST00000483212 hDV102S1A0JD36 115 aa5.53□□□□□ -1.52
USP4-210ENST00000483212 IBA57-AS1B1ANH7 110 aa5.53□□□□□ -1.52
USP4-210ENST00000483212 CCL25O15444 150 aa5.53□□□□□ -1.52
USP4-210ENST00000483212 LINC00518Q8N0U6 118 aa5.53□□□□□ -1.52
USP4-210ENST00000483212 UBE2WQ96B02 151 aa5.53□□□□□ -1.52
USP4-210ENST00000483212 TRAV9-2A0A087WT02 112 aa5.52□□□□□ -1.53
USP4-210ENST00000483212 TMEM223A0PJW6 202 aa5.52□□□□□ -1.53
USP4-210ENST00000483212 K7EP13 123 aa5.52□□□□□ -1.53
USP4-210ENST00000483212 HERVK_113P63121 156 aa5.52□□□□□ -1.53
USP4-210ENST00000483212 SEC11AP67812 179 aa5.52□□□□□ -1.53
USP4-210ENST00000483212 ANKRD39Q53RE8 183 aa5.52□□□□□ -1.53
USP4-210ENST00000483212 STPG4Q8N801 248 aa5.52□□□□□ -1.53
USP4-210ENST00000483212 CHCHD10Q8WYQ3 142 aaPredicted RBP5.52□□□□□ -1.53
USP4-210ENST00000483212 CDKN2A-AS1Q9UH64 79 aa5.52□□□□□ -1.53
USP4-210ENST00000483212 IGLV10-54A0A075B6I4 117 aa5.51□□□□□ -1.53
USP4-210ENST00000483212 TRAV8-4A0A0B4J246 113 aa5.51□□□□□ -1.53
USP4-210ENST00000483212 CRPP02741 224 aa5.51□□□□□ -1.53
USP4-210ENST00000483212 FOXI1Q12951 378 aa5.51□□□□□ -1.53
USP4-210ENST00000483212 SS18Q15532 418 aa5.51□□□□□ -1.53
USP4-210ENST00000483212 MIAQ16674 131 aa5.51□□□□□ -1.53
USP4-210ENST00000483212 CD164L2Q6UWJ8 174 aa5.51□□□□□ -1.53
USP4-210ENST00000483212 C10orf126Q8N4M7 172 aa5.51□□□□□ -1.53
USP4-210ENST00000483212 LINC00476Q8WZB0 136 aa5.51□□□□□ -1.53
USP4-210ENST00000483212 C12orf57Q99622 126 aa5.51□□□□□ -1.53
USP4-210ENST00000483212 KMT2CQ8NEZ4 4911 aaKnown RBP5.5□□□□□ -1.53
USP4-210ENST00000483212 KMT2AQ03164 3969 aa5.5□□□□□ -1.53
USP4-210ENST00000483212 A0A087WZ39 114 aa5.5□□□□□ -1.53
USP4-210ENST00000483212 IGKV2D-26A0A0A0MRZ7 120 aa5.5□□□□□ -1.53
USP4-210ENST00000483212 NBDYA0A0U1RRE5 68 aa5.5□□□□□ -1.53
USP4-210ENST00000483212 GAGE12HA6NDE8 117 aa5.5□□□□□ -1.53
USP4-210ENST00000483212 SMIM1B2RUZ4 78 aa5.5□□□□□ -1.53
USP4-210ENST00000483212 XCL1P47992 114 aa5.5□□□□□ -1.53
USP4-210ENST00000483212 TMEM170BQ5T4T1 132 aa5.5□□□□□ -1.53
USP4-210ENST00000483212 LINC00469Q8N7U9 141 aa5.5□□□□□ -1.53
USP4-210ENST00000483212 GEMIN7Q9H840 131 aaKnown RBP5.5□□□□□ -1.53
USP4-210ENST00000483212 DNAH17Q9UFH2 4485 aa5.49□□□□□ -1.53
USP4-210ENST00000483212 TRAV8-3A0A0A6YYJ7 113 aa5.49□□□□□ -1.53
USP4-210ENST00000483212 IGLV5-39A0A0G2JS06 123 aa5.49□□□□□ -1.53
USP4-210ENST00000483212 E9PLD3 99 aa5.49□□□□□ -1.53
USP4-210ENST00000483212 TSPEAR-AS2P59090 65 aa5.49□□□□□ -1.53
USP4-210ENST00000483212 Q6ZR54 194 aa5.49□□□□□ -1.53
USP4-210ENST00000483212 LINC01561Q8N1V8 128 aa5.49□□□□□ -1.53
USP4-210ENST00000483212 VAMP8Q9BV40 100 aa5.49□□□□□ -1.53
USP4-210ENST00000483212 PAM16Q9Y3D7 125 aa5.49□□□□□ -1.53
USP4-210ENST00000483212 IGHV1-58A0A0C4DH39 117 aa5.48□□□□□ -1.53
USP4-210ENST00000483212 SPINK8P0C7L1 97 aa5.48□□□□□ -1.53
USP4-210ENST00000483212 SPATA45Q537H7 98 aa5.48□□□□□ -1.53
USP4-210ENST00000483212 TTC32Q5I0X7 151 aa5.48□□□□□ -1.53
USP4-210ENST00000483212 C5orf38Q86SI9 138 aa5.48□□□□□ -1.53
USP4-210ENST00000483212 MAPKAPK5-AS1Q8N8E1 139 aa5.48□□□□□ -1.53
USP4-210ENST00000483212 Q9HAA7 133 aa5.48□□□□□ -1.53
USP4-210ENST00000483212 HSBP1L1C9JCN9 74 aa5.47□□□□□ -1.53
USP4-210ENST00000483212 H3BRM9 83 aa5.47□□□□□ -1.53
USP4-210ENST00000483212 COX7A2LO14548 114 aa5.47□□□□□ -1.53
USP4-210ENST00000483212 LEPROTO15243 131 aa5.47□□□□□ -1.53
USP4-210ENST00000483212 LY6G6CO95867 125 aa5.47□□□□□ -1.53
USP4-210ENST00000483212 Q6ZRN7 208 aaPredicted RBP5.47□□□□□ -1.53
USP4-210ENST00000483212 C1orf43Q9BWL3 253 aa5.47□□□□□ -1.53
USP4-210ENST00000483212 TTTY13Q9BZ97 58 aa5.47□□□□□ -1.53
USP4-210ENST00000483212 IGHV3-64A0A075B6Q5 118 aa5.46□□□□□ -1.54
USP4-210ENST00000483212 IGKV2D-24A0A075B6R9 120 aa5.46□□□□□ -1.54
USP4-210ENST00000483212 HERVK_113P61574 105 aa5.46□□□□□ -1.54
USP4-210ENST00000483212 S100A12P80511 92 aa5.46□□□□□ -1.54
USP4-210ENST00000483212 KIAA0087Q14695 138 aa5.46□□□□□ -1.54
USP4-210ENST00000483212 PCP2Q8IVA1 136 aa5.46□□□□□ -1.54
USP4-210ENST00000483212 C15orf56Q8N910 161 aa5.46□□□□□ -1.54
USP4-210ENST00000483212 TP73-AS1Q9UF72 201 aa5.46□□□□□ -1.54
USP4-210ENST00000483212 RYR3Q15413 4870 aa5.45□□□□□ -1.54
USP4-210ENST00000483212 J3QQQ9 107 aa5.45□□□□□ -1.54
USP4-210ENST00000483212 COX8AP10176 69 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms