RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 Q6ZTI0 123 aa10.27□□□□□ -0.77
CCDC78-211ENST00000481804 FAM218AQ96MZ4 157 aa10.27□□□□□ -0.77
CCDC78-211ENST00000481804 A8MTW9 85 aa10.27□□□□□ -0.77
CCDC78-211ENST00000481804 LINC00158P58513 81 aa10.27□□□□□ -0.77
CCDC78-211ENST00000481804 TRAV13-2A0A0B4J235 113 aa10.26□□□□□ -0.77
CCDC78-211ENST00000481804 HIST2H2BCQ6DN03 193 aa10.26□□□□□ -0.77
CCDC78-211ENST00000481804 MIR7-3HGQ8N6C7 128 aa10.26□□□□□ -0.77
CCDC78-211ENST00000481804 FAM110AQ9BQ89 295 aa10.26□□□□□ -0.77
CCDC78-211ENST00000481804 CDC42SE2Q9NRR3 84 aa10.26□□□□□ -0.77
CCDC78-211ENST00000481804 DEFB114Q30KQ6 69 aa10.25□□□□□ -0.77
CCDC78-211ENST00000481804 NTM-AS1Q6ZSK4 140 aa10.25□□□□□ -0.77
CCDC78-211ENST00000481804 C11orf44Q8N8P7 122 aa10.25□□□□□ -0.77
CCDC78-211ENST00000481804 TMEM243Q9BU79 118 aa10.25□□□□□ -0.77
CCDC78-211ENST00000481804 SND1-IT1Q9HBX3 110 aa10.25□□□□□ -0.77
CCDC78-211ENST00000481804 J3QLI3 93 aa10.25□□□□□ -0.77
CCDC78-211ENST00000481804 Q6YL49 198 aa10.25□□□□□ -0.77
CCDC78-211ENST00000481804 TMEM126AQ9H061 195 aa10.25□□□□□ -0.77
CCDC78-211ENST00000481804 MALP21145 153 aa10.24□□□□□ -0.77
CCDC78-211ENST00000481804 TRGV2A0A075B6R0 118 aa10.24□□□□□ -0.77
CCDC78-211ENST00000481804 TRBV10-1A0A0K0K1A3 114 aa10.24□□□□□ -0.77
CCDC78-211ENST00000481804 A0A1W2PRX2 142 aa10.24□□□□□ -0.77
CCDC78-211ENST00000481804 NOP10Q9NPE3 64 aaKnown RBP10.24□□□□□ -0.77
CCDC78-211ENST00000481804 ZNF469Q96JG9 3925 aaPredicted RBP10.23□□□□□ -0.77
CCDC78-211ENST00000481804 OR13C6PQ8NH95 151 aa10.23□□□□□ -0.77
CCDC78-211ENST00000481804 CSDC2Q9Y534 153 aaKnown RBP10.23□□□□□ -0.77
CCDC78-211ENST00000481804 NF1P21359 2839 aa10.23□□□□□ -0.77
CCDC78-211ENST00000481804 F5H768 121 aa10.22□□□□□ -0.77
CCDC78-211ENST00000481804 C1orf158Q8N1D5 194 aa10.22□□□□□ -0.77
CCDC78-211ENST00000481804 COX7B2Q8TF08 81 aa10.22□□□□□ -0.77
CCDC78-211ENST00000481804 NBPF19A0A087WUL8 3843 aa10.22□□□□□ -0.77
CCDC78-211ENST00000481804 PFN2P35080 140 aa10.22□□□□□ -0.77
CCDC78-211ENST00000481804 ODF3L2Q3SX64 289 aa10.22□□□□□ -0.77
CCDC78-211ENST00000481804 C4orf3Q8WVX3 66 aa10.22□□□□□ -0.77
CCDC78-211ENST00000481804 Q96MF0 132 aa10.22□□□□□ -0.77
CCDC78-211ENST00000481804 CHD6Q8TD26 2715 aa10.21□□□□□ -0.77
CCDC78-211ENST00000481804 C3orf22Q8N5N4 141 aa10.21□□□□□ -0.77
CCDC78-211ENST00000481804 MTORP42345 2549 aa10.21□□□□□ -0.77
CCDC78-211ENST00000481804 PF4P02776 101 aa10.21□□□□□ -0.78
CCDC78-211ENST00000481804 LINC00337Q8N6G1 96 aa10.21□□□□□ -0.78
CCDC78-211ENST00000481804 PAX4O43316 350 aa10.2□□□□□ -0.78
CCDC78-211ENST00000481804 FAM222AQ5U5X8 452 aa10.2□□□□□ -0.78
CCDC78-211ENST00000481804 C14orf132Q9NPU4 83 aa10.2□□□□□ -0.78
CCDC78-211ENST00000481804 ATP5G1P05496 136 aa10.2□□□□□ -0.78
CCDC78-211ENST00000481804 C11orf68Q9H3H3 251 aaKnown RBP10.2□□□□□ -0.78
CCDC78-211ENST00000481804 ACANP16112 2415 aa10.2□□□□□ -0.78
CCDC78-211ENST00000481804 UQCRQO14949 82 aa10.2□□□□□ -0.78
CCDC78-211ENST00000481804 RPL28P46779 137 aaKnown RBP10.2□□□□□ -0.78
CCDC78-211ENST00000481804 OVOL2Q9BRP0 275 aa10.2□□□□□ -0.78
CCDC78-211ENST00000481804 TRGV4A0A0C4DH28 118 aa10.19□□□□□ -0.78
CCDC78-211ENST00000481804 LOC100131303A0A0U1RQF7 123 aa10.19□□□□□ -0.78
CCDC78-211ENST00000481804 SMIM11BQ8TCY0 68 aa10.19□□□□□ -0.78
CCDC78-211ENST00000481804 A0A087WYN8 130 aa10.18□□□□□ -0.78
CCDC78-211ENST00000481804 SDIM1Q6ZPB5 146 aa10.18□□□□□ -0.78
CCDC78-211ENST00000481804 FAM19A3Q7Z5A8 133 aa10.18□□□□□ -0.78
CCDC78-211ENST00000481804 IGKV3D-7A0A0C4DH55 119 aa10.18□□□□□ -0.78
CCDC78-211ENST00000481804 LECT2O14960 151 aa10.17□□□□□ -0.78
CCDC78-211ENST00000481804 C5orf38Q86SI9 138 aa10.17□□□□□ -0.78
CCDC78-211ENST00000481804 CXCL5P42830 114 aa10.16□□□□□ -0.78
CCDC78-211ENST00000481804 IGKV2-28A0A075B6P5 120 aa10.16□□□□□ -0.78
CCDC78-211ENST00000481804 IGKV2D-28P01615 120 aa10.16□□□□□ -0.78
CCDC78-211ENST00000481804 C22orf24Q9Y442 160 aa10.16□□□□□ -0.78
CCDC78-211ENST00000481804 FN1P02751 2386 aaKnown RBP10.16□□□□□ -0.78
CCDC78-211ENST00000481804 RPL35AP18077 110 aaKnown RBP10.15□□□□□ -0.78
CCDC78-211ENST00000481804 CCL18P55774 89 aa10.15□□□□□ -0.78
CCDC78-211ENST00000481804 H0YGX0 51 aa10.15□□□□□ -0.78
CCDC78-211ENST00000481804 BBC3Q96PG8 261 aaPredicted RBP10.15□□□□□ -0.78
CCDC78-211ENST00000481804 KLK5Q9Y337 293 aaPredicted RBP10.15□□□□□ -0.78
CCDC78-211ENST00000481804 IGHV4-31P0DP07 118 aa10.14□□□□□ -0.79
CCDC78-211ENST00000481804 LINC00526Q96FQ7 95 aa10.14□□□□□ -0.79
CCDC78-211ENST00000481804 SLPIP03973 132 aa10.14□□□□□ -0.79
CCDC78-211ENST00000481804 ATOX1O00244 68 aa10.14□□□□□ -0.79
CCDC78-211ENST00000481804 C6orf226Q5I0X4 101 aa10.14□□□□□ -0.79
CCDC78-211ENST00000481804 FASNP49327 2511 aaKnown RBP10.13□□□□□ -0.79
CCDC78-211ENST00000481804 APCP25054 2843 aa10.13□□□□□ -0.79
CCDC78-211ENST00000481804 IGLV4-60A0A075B6I1 120 aa10.13□□□□□ -0.79
CCDC78-211ENST00000481804 NCR3O14931 201 aa10.13□□□□□ -0.79
CCDC78-211ENST00000481804 COX7CP15954 63 aa10.13□□□□□ -0.79
CCDC78-211ENST00000481804 PPDPFQ9H3Y8 114 aa10.13□□□□□ -0.79
CCDC78-211ENST00000481804 C9orf129Q5T035 196 aaKnown RBP10.12□□□□□ -0.79
CCDC78-211ENST00000481804 IL17DQ8TAD2 202 aa10.12□□□□□ -0.79
CCDC78-211ENST00000481804 A0A096LNT2 108 aa10.12□□□□□ -0.79
CCDC78-211ENST00000481804 NIPBLQ6KC79 2804 aaeCLIP10.12□□□□□ -0.79
CCDC78-211ENST00000481804 KRTAP10-9P60411 292 aa10.12□□□□□ -0.79
CCDC78-211ENST00000481804 LRRC75A-AS1Q8N1F1 130 aa10.12□□□□□ -0.79
CCDC78-211ENST00000481804 TRAV25A0A0B4J276 109 aa10.11□□□□□ -0.79
CCDC78-211ENST00000481804 A0A1B0GX51 115 aa10.11□□□□□ -0.79
CCDC78-211ENST00000481804 WFDC10AQ9H1F0 79 aa10.11□□□□□ -0.79
CCDC78-211ENST00000481804 IBA57-AS1B1ANH7 110 aa10.11□□□□□ -0.79
CCDC78-211ENST00000481804 CCL24O00175 119 aa10.11□□□□□ -0.79
CCDC78-211ENST00000481804 FLNAP21333 2647 aaKnown RBP10.1□□□□□ -0.79
CCDC78-211ENST00000481804 ITPR3Q14573 2671 aa10.1□□□□□ -0.79
CCDC78-211ENST00000481804 hADV29S1A0JD25 119 aa10.1□□□□□ -0.79
CCDC78-211ENST00000481804 FSHBP01225 129 aa10.1□□□□□ -0.79
CCDC78-211ENST00000481804 C16orf74Q96GX8 76 aa10.1□□□□□ -0.79
CCDC78-211ENST00000481804 LINC00846Q9NV44 126 aa10.1□□□□□ -0.79
CCDC78-211ENST00000481804 PLA2G2AP14555 144 aa10.09□□□□□ -0.79
CCDC78-211ENST00000481804 XCL1P47992 114 aa10.09□□□□□ -0.79
CCDC78-211ENST00000481804 HIST1H4AP62805 103 aaKnown RBP10.09□□□□□ -0.79
CCDC78-211ENST00000481804 UBR5O95071 2799 aaPredicted RBP10.09□□□□□ -0.79
CCDC78-211ENST00000481804 A0A087WVE0 104 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms