RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 SPANXA1Q9NS26 97 aa6.87□□□□□ -1.31
SSBP1-210ENST00000481508 TRAPPC1Q9Y5R8 145 aa6.87□□□□□ -1.31
SSBP1-210ENST00000481508 IGLV4-3A0A075B6K6 122 aa6.86□□□□□ -1.31
SSBP1-210ENST00000481508 TRAV13-1A0A0B4J241 112 aa6.86□□□□□ -1.31
SSBP1-210ENST00000481508 SLPIP03973 132 aa6.86□□□□□ -1.31
SSBP1-210ENST00000481508 XGP55808 180 aa6.86□□□□□ -1.31
SSBP1-210ENST00000481508 HIGD2BQ4VC39 106 aa6.86□□□□□ -1.31
SSBP1-210ENST00000481508 LINC01546A6NGU7 62 aa6.85□□□□□ -1.31
SSBP1-210ENST00000481508 INAFM2P0DMQ5 153 aa6.85□□□□□ -1.31
SSBP1-210ENST00000481508 MRPS36P82909 103 aaKnown RBP6.85□□□□□ -1.31
SSBP1-210ENST00000481508 SS18Q15532 418 aa6.85□□□□□ -1.31
SSBP1-210ENST00000481508 LINC00173Q6ZV60 143 aa6.85□□□□□ -1.31
SSBP1-210ENST00000481508 hDV102S1A0JD36 115 aa6.84□□□□□ -1.31
SSBP1-210ENST00000481508 IGIPA6NJ69 53 aa6.84□□□□□ -1.31
SSBP1-210ENST00000481508 SCO1O75880 301 aa6.84□□□□□ -1.31
SSBP1-210ENST00000481508 C14orf177Q52M58 125 aa6.84□□□□□ -1.31
SSBP1-210ENST00000481508 ORMDL2Q53FV1 153 aa6.84□□□□□ -1.31
SSBP1-210ENST00000481508 PRSS3P2Q8NHM4 247 aa6.84□□□□□ -1.31
SSBP1-210ENST00000481508 C18orf32Q8TCD1 76 aa6.84□□□□□ -1.31
SSBP1-210ENST00000481508 SMCO4Q9NRQ5 59 aa6.84□□□□□ -1.31
SSBP1-210ENST00000481508 CYSLTR1Q9Y271 337 aa6.84□□□□□ -1.31
SSBP1-210ENST00000481508 PYGO1Q9Y3Y4 419 aa6.84□□□□□ -1.31
SSBP1-210ENST00000481508 A0A096LNJ9 63 aa6.83□□□□□ -1.32
SSBP1-210ENST00000481508 SMAGPQ0VAQ4 97 aa6.83□□□□□ -1.32
SSBP1-210ENST00000481508 CD164L2Q6UWJ8 174 aa6.83□□□□□ -1.32
SSBP1-210ENST00000481508 Q6ZSA8 131 aa6.83□□□□□ -1.32
SSBP1-210ENST00000481508 TOMM6Q96B49 74 aa6.83□□□□□ -1.32
SSBP1-210ENST00000481508 LINC00526Q96FQ7 95 aa6.83□□□□□ -1.32
SSBP1-210ENST00000481508 TMEM141Q96I45 108 aa6.83□□□□□ -1.32
SSBP1-210ENST00000481508 RNF213Q63HN8 5207 aa6.82□□□□□ -1.32
SSBP1-210ENST00000481508 GVQW2A0A096LPI5 108 aaPredicted RBP6.82□□□□□ -1.32
SSBP1-210ENST00000481508 IFITM10A6NMD0 228 aa6.82□□□□□ -1.32
SSBP1-210ENST00000481508 C1orf196B1AJZ1 125 aa6.82□□□□□ -1.32
SSBP1-210ENST00000481508 K7EMI3 77 aa6.82□□□□□ -1.32
SSBP1-210ENST00000481508 COX6A2Q02221 97 aa6.82□□□□□ -1.32
SSBP1-210ENST00000481508 C5orf38Q86SI9 138 aa6.82□□□□□ -1.32
SSBP1-210ENST00000481508 COLCA2A8K830 154 aa6.81□□□□□ -1.32
SSBP1-210ENST00000481508 EPM2AB3EWF7 344 aa6.81□□□□□ -1.32
SSBP1-210ENST00000481508 PANO1I0J062 215 aa6.81□□□□□ -1.32
SSBP1-210ENST00000481508 CNBPP62633 177 aaKnown RBP6.81□□□□□ -1.32
SSBP1-210ENST00000481508 PMCHL1Q16048 86 aa6.81□□□□□ -1.32
SSBP1-210ENST00000481508 LINC00242Q5T6M2 205 aa6.81□□□□□ -1.32
SSBP1-210ENST00000481508 FA2HQ7L5A8 372 aa6.81□□□□□ -1.32
SSBP1-210ENST00000481508 AMELXQ99217 191 aa6.81□□□□□ -1.32
SSBP1-210ENST00000481508 IGHV1-58A0A0C4DH39 117 aa6.8□□□□□ -1.32
SSBP1-210ENST00000481508 COX7A2LO14548 114 aa6.8□□□□□ -1.32
SSBP1-210ENST00000481508 UBE2D1P51668 147 aa6.8□□□□□ -1.32
SSBP1-210ENST00000481508 C9orf163Q8N9P6 203 aa6.8□□□□□ -1.32
SSBP1-210ENST00000481508 IGHV3OR16-9A0A0B4J2B5 98 aa6.79□□□□□ -1.32
SSBP1-210ENST00000481508 TRGC2P03986 189 aa6.79□□□□□ -1.32
SSBP1-210ENST00000481508 CFAP161Q6P656 301 aa6.79□□□□□ -1.32
SSBP1-210ENST00000481508 TEX43Q6ZNM6 134 aa6.79□□□□□ -1.32
SSBP1-210ENST00000481508 SDIM1Q6ZPB5 146 aa6.79□□□□□ -1.32
SSBP1-210ENST00000481508 TIMM17AQ99595 171 aa6.79□□□□□ -1.32
SSBP1-210ENST00000481508 KRTAP4-9Q9BYQ8 210 aa6.79□□□□□ -1.32
SSBP1-210ENST00000481508 IGLV4-69A0A075B6H9 119 aa6.78□□□□□ -1.32
SSBP1-210ENST00000481508 LINC00614P0C842 121 aa6.78□□□□□ -1.32
SSBP1-210ENST00000481508 KRTAP19-4Q3LI73 84 aa6.78□□□□□ -1.32
SSBP1-210ENST00000481508 ERASQ7Z444 233 aa6.78□□□□□ -1.32
SSBP1-210ENST00000481508 SCGB3A1Q96QR1 104 aa6.78□□□□□ -1.32
SSBP1-210ENST00000481508 AP5S1Q9NUS5 200 aa6.78□□□□□ -1.32
SSBP1-210ENST00000481508 SMR3BP02814 79 aaPredicted RBP6.77□□□□□ -1.33
SSBP1-210ENST00000481508 NPSP0C0P6 89 aa6.77□□□□□ -1.33
SSBP1-210ENST00000481508 CHTF8P0CG12 524 aa6.77□□□□□ -1.33
SSBP1-210ENST00000481508 MALP21145 153 aa6.77□□□□□ -1.33
SSBP1-210ENST00000481508 LINC00310P59036 64 aa6.77□□□□□ -1.33
SSBP1-210ENST00000481508 Q6ZN92 141 aa6.77□□□□□ -1.33
SSBP1-210ENST00000481508 SCXQ7RTU7 201 aa6.77□□□□□ -1.33
SSBP1-210ENST00000481508 VCX2Q9H322 139 aa6.77□□□□□ -1.33
SSBP1-210ENST00000481508 IGHV3-64A0A075B6Q5 118 aa6.76□□□□□ -1.33
SSBP1-210ENST00000481508 A0A0J9YXV3 536 aa6.76□□□□□ -1.33
SSBP1-210ENST00000481508 SPAG11BQ08648 103 aa6.76□□□□□ -1.33
SSBP1-210ENST00000481508 PDZD11Q5EBL8 140 aa6.76□□□□□ -1.33
SSBP1-210ENST00000481508 Q6ZRU5 148 aa6.76□□□□□ -1.33
SSBP1-210ENST00000481508 FAM19A3Q7Z5A8 133 aa6.76□□□□□ -1.33
SSBP1-210ENST00000481508 C2orf88Q9BSF0 95 aa6.76□□□□□ -1.33
SSBP1-210ENST00000481508 A0A087WZ39 114 aa6.75□□□□□ -1.33
SSBP1-210ENST00000481508 HBDP02042 147 aa6.75□□□□□ -1.33
SSBP1-210ENST00000481508 G0S2P27469 103 aa6.75□□□□□ -1.33
SSBP1-210ENST00000481508 LCE4AQ5TA78 99 aa6.75□□□□□ -1.33
SSBP1-210ENST00000481508 Q5VSD8 79 aa6.75□□□□□ -1.33
SSBP1-210ENST00000481508 CIRBP-AS1Q8TBR5 109 aa6.75□□□□□ -1.33
SSBP1-210ENST00000481508 ORAOV1Q8WV07 137 aa6.75□□□□□ -1.33
SSBP1-210ENST00000481508 ZNF561-AS1K7EIQ3 104 aa6.74□□□□□ -1.33
SSBP1-210ENST00000481508 SYCNQ0VAF6 134 aa6.74□□□□□ -1.33
SSBP1-210ENST00000481508 KIAA0087Q14695 138 aa6.74□□□□□ -1.33
SSBP1-210ENST00000481508 CARD19Q96LW7 228 aa6.74□□□□□ -1.33
SSBP1-210ENST00000481508 CHAC1Q9BUX1 264 aa6.74□□□□□ -1.33
SSBP1-210ENST00000481508 CST9LQ9H4G1 147 aa6.74□□□□□ -1.33
SSBP1-210ENST00000481508 A0A096LNI7 61 aa6.73□□□□□ -1.33
SSBP1-210ENST00000481508 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.73□□□□□ -1.33
SSBP1-210ENST00000481508 NUPR1O60356 82 aa6.73□□□□□ -1.33
SSBP1-210ENST00000481508 CIRBPQ14011 172 aaKnown RBP6.73□□□□□ -1.33
SSBP1-210ENST00000481508 C10orf25Q5T742 122 aa6.73□□□□□ -1.33
SSBP1-210ENST00000481508 CDKN2A-AS1Q9UH64 79 aa6.73□□□□□ -1.33
SSBP1-210ENST00000481508 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.72□□□□□ -1.33
SSBP1-210ENST00000481508 SERF1AO75920 110 aa6.72□□□□□ -1.33
SSBP1-210ENST00000481508 APOMO95445 188 aa6.72□□□□□ -1.33
SSBP1-210ENST00000481508 RAB5BP61020 215 aa6.72□□□□□ -1.33
SSBP1-210ENST00000481508 PMVKQ15126 192 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms