RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 Q9HAA7 133 aa6.2□□□□□ -1.42
SNRNP200-203ENST00000480242 HOXD3P31249 432 aaPredicted RBP6.19□□□□□ -1.42
SNRNP200-203ENST00000480242 DYNLRB2Q8TF09 96 aa6.19□□□□□ -1.42
SNRNP200-203ENST00000480242 COX7A2LO14548 114 aa6.19□□□□□ -1.42
SNRNP200-203ENST00000480242 TMEM258P61165 79 aa6.19□□□□□ -1.42
SNRNP200-203ENST00000480242 MED14OSP0DP75 135 aa6.19□□□□□ -1.42
SNRNP200-203ENST00000480242 RPL18AQ02543 176 aaKnown RBP6.19□□□□□ -1.42
SNRNP200-203ENST00000480242 IGHV3-73A0A0B4J1V6 119 aa6.18□□□□□ -1.42
SNRNP200-203ENST00000480242 DYNC2H1Q8NCM8 4307 aaKnown RBP6.18□□□□□ -1.42
SNRNP200-203ENST00000480242 TRAV12-2A0A075B6T6 113 aa6.18□□□□□ -1.42
SNRNP200-203ENST00000480242 J3QLI3 93 aa6.18□□□□□ -1.42
SNRNP200-203ENST00000480242 M0QY20 66 aa6.18□□□□□ -1.42
SNRNP200-203ENST00000480242 CFHR3Q02985 330 aa6.18□□□□□ -1.42
SNRNP200-203ENST00000480242 VSIG2Q96IQ7 327 aa6.18□□□□□ -1.42
SNRNP200-203ENST00000480242 DNAL4O96015 105 aa6.18□□□□□ -1.42
SNRNP200-203ENST00000480242 NOTCH1P46531 2555 aa6.17□□□□□ -1.42
SNRNP200-203ENST00000480242 COL6A5A8TX70 2615 aa6.17□□□□□ -1.42
SNRNP200-203ENST00000480242 TRBV6-5A0A0K0K1A5 114 aa6.17□□□□□ -1.42
SNRNP200-203ENST00000480242 C18orf65Q6ZTR6 163 aa6.17□□□□□ -1.42
SNRNP200-203ENST00000480242 SERP2Q8N6R1 65 aa6.17□□□□□ -1.42
SNRNP200-203ENST00000480242 INAFM2P0DMQ5 153 aa6.16□□□□□ -1.42
SNRNP200-203ENST00000480242 Q5XG85 94 aa6.16□□□□□ -1.42
SNRNP200-203ENST00000480242 FAM218AQ96MZ4 157 aa6.16□□□□□ -1.42
SNRNP200-203ENST00000480242 SLURP1P55000 103 aa6.16□□□□□ -1.42
SNRNP200-203ENST00000480242 CIRBPQ14011 172 aaKnown RBP6.16□□□□□ -1.42
SNRNP200-203ENST00000480242 C14orf132Q9NPU4 83 aa6.16□□□□□ -1.42
SNRNP200-203ENST00000480242 PYGO1Q9Y3Y4 419 aa6.16□□□□□ -1.42
SNRNP200-203ENST00000480242 U3KQE9 123 aa6.16□□□□□ -1.42
SNRNP200-203ENST00000480242 STAB1Q9NY15 2570 aa6.16□□□□□ -1.42
SNRNP200-203ENST00000480242 HIST1H4AP62805 103 aaKnown RBP6.16□□□□□ -1.42
SNRNP200-203ENST00000480242 MRPS36P82909 103 aaKnown RBP6.16□□□□□ -1.42
SNRNP200-203ENST00000480242 LINC00308Q8TCZ7 52 aa6.16□□□□□ -1.42
SNRNP200-203ENST00000480242 IGHV4-31P0DP07 118 aa6.15□□□□□ -1.42
SNRNP200-203ENST00000480242 KRTAP21-3Q3LHN1 58 aa6.15□□□□□ -1.42
SNRNP200-203ENST00000480242 USP17L23D6RBM5 183 aa6.15□□□□□ -1.42
SNRNP200-203ENST00000480242 SEC61GP60059 68 aa6.15□□□□□ -1.42
SNRNP200-203ENST00000480242 Q9H8V8 135 aa6.15□□□□□ -1.43
SNRNP200-203ENST00000480242 CDKN2A-AS1Q9UH64 79 aa6.15□□□□□ -1.43
SNRNP200-203ENST00000480242 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.14□□□□□ -1.43
SNRNP200-203ENST00000480242 IGKV2-29A2NJV5 120 aaPredicted RBP6.14□□□□□ -1.43
SNRNP200-203ENST00000480242 SPINK13Q1W4C9 94 aa6.14□□□□□ -1.43
SNRNP200-203ENST00000480242 PRIMA1Q86XR5 153 aa6.14□□□□□ -1.43
SNRNP200-203ENST00000480242 C1orf43Q9BWL3 253 aa6.14□□□□□ -1.43
SNRNP200-203ENST00000480242 C22orf24Q9Y442 160 aa6.14□□□□□ -1.43
SNRNP200-203ENST00000480242 MALP21145 153 aa6.14□□□□□ -1.43
SNRNP200-203ENST00000480242 UBE2E2Q96LR5 201 aa6.14□□□□□ -1.43
SNRNP200-203ENST00000480242 A6NDX4 124 aa6.13□□□□□ -1.43
SNRNP200-203ENST00000480242 PROK1P58294 105 aa6.13□□□□□ -1.43
SNRNP200-203ENST00000480242 UPK3BQ9BT76 320 aa6.13□□□□□ -1.43
SNRNP200-203ENST00000480242 KNCNA6PVL3 124 aa6.13□□□□□ -1.43
SNRNP200-203ENST00000480242 PRM2P04554 102 aa6.13□□□□□ -1.43
SNRNP200-203ENST00000480242 DEFB131AP59861 70 aa6.13□□□□□ -1.43
SNRNP200-203ENST00000480242 C9orf129Q5T035 196 aaKnown RBP6.13□□□□□ -1.43
SNRNP200-203ENST00000480242 LINC00846Q9NV44 126 aa6.13□□□□□ -1.43
SNRNP200-203ENST00000480242 TMEM89A2RUT3 159 aa6.13□□□□□ -1.43
SNRNP200-203ENST00000480242 SOCS3O14543 225 aa6.13□□□□□ -1.43
SNRNP200-203ENST00000480242 IGHG2P01859 326 aa6.13□□□□□ -1.43
SNRNP200-203ENST00000480242 FHL2Q14192 279 aa6.13□□□□□ -1.43
SNRNP200-203ENST00000480242 SOSTDC1Q6X4U4 206 aa6.13□□□□□ -1.43
SNRNP200-203ENST00000480242 FAM223AQ8IWN6 122 aa6.13□□□□□ -1.43
SNRNP200-203ENST00000480242 FAM104AQ969W3 186 aa6.13□□□□□ -1.43
SNRNP200-203ENST00000480242 TINCRA0A1B0GVN0 87 aa6.12□□□□□ -1.43
SNRNP200-203ENST00000480242 SNRPD3P62318 126 aaKnown RBP6.12□□□□□ -1.43
SNRNP200-203ENST00000480242 BEAN1Q3B7T3 259 aa6.12□□□□□ -1.43
SNRNP200-203ENST00000480242 LINC01561Q8N1V8 128 aa6.12□□□□□ -1.43
SNRNP200-203ENST00000480242 TMEM86BQ8N661 226 aa6.12□□□□□ -1.43
SNRNP200-203ENST00000480242 PKIGQ9Y2B9 76 aa6.12□□□□□ -1.43
SNRNP200-203ENST00000480242 IGHV3-16A0A0C4DH30 117 aa6.12□□□□□ -1.43
SNRNP200-203ENST00000480242 IGHV3-38A0A0C4DH36 116 aa6.12□□□□□ -1.43
SNRNP200-203ENST00000480242 FAM223BA6NKX1 122 aa6.12□□□□□ -1.43
SNRNP200-203ENST00000480242 PFN2P35080 140 aa6.12□□□□□ -1.43
SNRNP200-203ENST00000480242 APRG1Q8IVJ8 170 aa6.12□□□□□ -1.43
SNRNP200-203ENST00000480242 WFDC9Q8NEX5 89 aa6.12□□□□□ -1.43
SNRNP200-203ENST00000480242 USMG5Q96IX5 58 aa6.12□□□□□ -1.43
SNRNP200-203ENST00000480242 Q9UF83 564 aa6.12□□□□□ -1.43
SNRNP200-203ENST00000480242 HILS1P60008 231 aa6.12□□□□□ -1.43
SNRNP200-203ENST00000480242 PIK3CD-AS1Q5SR53 167 aa6.12□□□□□ -1.43
SNRNP200-203ENST00000480242 KLLNB2CW77 178 aa6.11□□□□□ -1.43
SNRNP200-203ENST00000480242 DGAT2L7PQ6IED9 249 aa6.11□□□□□ -1.43
SNRNP200-203ENST00000480242 HIVEP1P15822 2718 aa6.11□□□□□ -1.43
SNRNP200-203ENST00000480242 TRAV23DV6A0A075B6W5 121 aa6.11□□□□□ -1.43
SNRNP200-203ENST00000480242 NDUFA1O15239 70 aa6.11□□□□□ -1.43
SNRNP200-203ENST00000480242 TIMM17BO60830 172 aa6.11□□□□□ -1.43
SNRNP200-203ENST00000480242 C20orf197Q8N268 126 aa6.11□□□□□ -1.43
SNRNP200-203ENST00000480242 TMEM243Q9BU79 118 aa6.11□□□□□ -1.43
SNRNP200-203ENST00000480242 BAHCC1Q9P281 2608 aa6.1□□□□□ -1.43
SNRNP200-203ENST00000480242 RPL35AP18077 110 aaKnown RBP6.1□□□□□ -1.43
SNRNP200-203ENST00000480242 LINC00336Q6ZUF6 198 aa6.1□□□□□ -1.43
SNRNP200-203ENST00000480242 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.1□□□□□ -1.43
SNRNP200-203ENST00000480242 XCL2Q9UBD3 114 aa6.1□□□□□ -1.43
SNRNP200-203ENST00000480242 GHRHP01286 108 aa6.1□□□□□ -1.43
SNRNP200-203ENST00000480242 PF4P02776 101 aa6.1□□□□□ -1.43
SNRNP200-203ENST00000480242 Q6JHZ5 121 aa6.1□□□□□ -1.43
SNRNP200-203ENST00000480242 C9orf85Q96MD7 179 aa6.1□□□□□ -1.43
SNRNP200-203ENST00000480242 H3BUA1 57 aa6.09□□□□□ -1.43
SNRNP200-203ENST00000480242 NCR3O14931 201 aa6.09□□□□□ -1.43
SNRNP200-203ENST00000480242 FAM222AQ5U5X8 452 aa6.09□□□□□ -1.43
SNRNP200-203ENST00000480242 NDUFA4O00483 81 aa6.09□□□□□ -1.43
SNRNP200-203ENST00000480242 COX6A2Q02221 97 aa6.09□□□□□ -1.43
SNRNP200-203ENST00000480242 A0A087WYN8 130 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms