RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 RBMY1BA6NDE4 496 aaKnown RBP8.41□□□□□ -1.06
RAPGEF3-209ENST00000479866 RBMY1EA6NEQ0 496 aaKnown RBP8.41□□□□□ -1.06
RAPGEF3-209ENST00000479866 KLLNB2CW77 178 aa8.41□□□□□ -1.06
RAPGEF3-209ENST00000479866 RBMY1DP0C7P1 496 aaKnown RBP8.41□□□□□ -1.06
RAPGEF3-209ENST00000479866 RBMY1A1P0DJD3 496 aaKnown RBP8.41□□□□□ -1.06
RAPGEF3-209ENST00000479866 RBMY1CP0DJD4 496 aa8.41□□□□□ -1.06
RAPGEF3-209ENST00000479866 RBMY1FQ15415 496 aaKnown RBP8.41□□□□□ -1.06
RAPGEF3-209ENST00000479866 P0DMU3 169 aa8.4□□□□□ -1.06
RAPGEF3-209ENST00000479866 FAM231AP0DMU4 169 aa8.4□□□□□ -1.06
RAPGEF3-209ENST00000479866 FAM231CP0DMU5 169 aa8.4□□□□□ -1.06
RAPGEF3-209ENST00000479866 PPP1R17O96001 155 aa8.4□□□□□ -1.07
RAPGEF3-209ENST00000479866 DNAL4O96015 105 aa8.4□□□□□ -1.07
RAPGEF3-209ENST00000479866 SS18Q15532 418 aa8.4□□□□□ -1.07
RAPGEF3-209ENST00000479866 FAM240AA0A1B0GVK7 77 aa8.39□□□□□ -1.07
RAPGEF3-209ENST00000479866 SUMO4Q6EEV6 95 aa8.39□□□□□ -1.07
RAPGEF3-209ENST00000479866 SDIM1Q6ZPB5 146 aa8.39□□□□□ -1.07
RAPGEF3-209ENST00000479866 A0A096LPF7 62 aa8.39□□□□□ -1.07
RAPGEF3-209ENST00000479866 CRYGDP07320 174 aa8.39□□□□□ -1.07
RAPGEF3-209ENST00000479866 PRB2P02812 416 aaPredicted RBP8.39□□□□□ -1.07
RAPGEF3-209ENST00000479866 SMIM2Q9BVW6 85 aa8.39□□□□□ -1.07
RAPGEF3-209ENST00000479866 H3BT86 120 aa8.38□□□□□ -1.07
RAPGEF3-209ENST00000479866 IGLV1-51P01701 117 aa8.38□□□□□ -1.07
RAPGEF3-209ENST00000479866 LGALS3P17931 250 aaKnown RBP8.38□□□□□ -1.07
RAPGEF3-209ENST00000479866 ATP5G1P05496 136 aa8.38□□□□□ -1.07
RAPGEF3-209ENST00000479866 VCYO14598 125 aa8.37□□□□□ -1.07
RAPGEF3-209ENST00000479866 KRTAP10-3P60369 221 aa8.37□□□□□ -1.07
RAPGEF3-209ENST00000479866 Q6ZTI0 123 aa8.37□□□□□ -1.07
RAPGEF3-209ENST00000479866 Q8N8P6 123 aa8.37□□□□□ -1.07
RAPGEF3-209ENST00000479866 RNF185Q96GF1 192 aa8.37□□□□□ -1.07
RAPGEF3-209ENST00000479866 SPANXDQ9BXN6 97 aa8.37□□□□□ -1.07
RAPGEF3-209ENST00000479866 C11orf68Q9H3H3 251 aaKnown RBP8.37□□□□□ -1.07
RAPGEF3-209ENST00000479866 SMIM26A0A096LP01 95 aa8.37□□□□□ -1.07
RAPGEF3-209ENST00000479866 C2orf66Q6UXQ4 117 aa8.37□□□□□ -1.07
RAPGEF3-209ENST00000479866 NDUFC2-KCTD14E9PQ53 114 aa8.36□□□□□ -1.07
RAPGEF3-209ENST00000479866 RNASE13Q5GAN3 156 aaKnown RBP8.36□□□□□ -1.07
RAPGEF3-209ENST00000479866 LINC00643Q86TS7 51 aa8.36□□□□□ -1.07
RAPGEF3-209ENST00000479866 SPTSSBQ8NFR3 76 aa8.36□□□□□ -1.07
RAPGEF3-209ENST00000479866 TP53TG1Q9Y2A0 90 aa8.36□□□□□ -1.07
RAPGEF3-209ENST00000479866 UBE2L6O14933 153 aa8.36□□□□□ -1.07
RAPGEF3-209ENST00000479866 ZFHX3Q15911 3703 aa8.36□□□□□ -1.07
RAPGEF3-209ENST00000479866 CFC1BP0CG36 223 aa8.35□□□□□ -1.07
RAPGEF3-209ENST00000479866 CFC1P0CG37 223 aa8.35□□□□□ -1.07
RAPGEF3-209ENST00000479866 Q5XG85 94 aa8.35□□□□□ -1.07
RAPGEF3-209ENST00000479866 SERP2Q8N6R1 65 aa8.35□□□□□ -1.07
RAPGEF3-209ENST00000479866 IGHV3-64A0A075B6Q5 118 aa8.35□□□□□ -1.07
RAPGEF3-209ENST00000479866 KRTAP24-1Q3LI83 254 aa8.35□□□□□ -1.07
RAPGEF3-209ENST00000479866 NBEAL1Q6ZS30 2694 aa8.35□□□□□ -1.07
RAPGEF3-209ENST00000479866 RPL36AP83881 106 aaKnown RBP8.35□□□□□ -1.07
RAPGEF3-209ENST00000479866 RPL36ALQ969Q0 106 aaKnown RBP8.35□□□□□ -1.07
RAPGEF3-209ENST00000479866 DAZ4Q86SG3 579 aaKnown RBP8.35□□□□□ -1.07
RAPGEF3-209ENST00000479866 CRYGAP11844 174 aa8.34□□□□□ -1.07
RAPGEF3-209ENST00000479866 ZNF625Q96I27 306 aaPredicted RBP8.34□□□□□ -1.07
RAPGEF3-209ENST00000479866 A0A0J9YY99 117 aa8.34□□□□□ -1.07
RAPGEF3-209ENST00000479866 TRBV10-2A0A0K0K1G8 114 aa8.34□□□□□ -1.07
RAPGEF3-209ENST00000479866 RPL39P62891 51 aaKnown RBP8.34□□□□□ -1.07
RAPGEF3-209ENST00000479866 PAX4O43316 350 aa8.34□□□□□ -1.08
RAPGEF3-209ENST00000479866 APOC4P55056 127 aa8.34□□□□□ -1.08
RAPGEF3-209ENST00000479866 CD164Q04900 197 aa8.34□□□□□ -1.08
RAPGEF3-209ENST00000479866 COX8CQ7Z4L0 72 aa8.34□□□□□ -1.08
RAPGEF3-209ENST00000479866 MUC4Q99102 2169 aa8.33□□□□□ -1.08
RAPGEF3-209ENST00000479866 SPATA3Q8NHX4 192 aa8.32□□□□□ -1.08
RAPGEF3-209ENST00000479866 PLEKHB2Q96CS7 222 aa8.32□□□□□ -1.08
RAPGEF3-209ENST00000479866 GHRHP01286 108 aa8.32□□□□□ -1.08
RAPGEF3-209ENST00000479866 C1orf158Q8N1D5 194 aa8.32□□□□□ -1.08
RAPGEF3-209ENST00000479866 SLC25A29Q8N8R3 303 aa8.32□□□□□ -1.08
RAPGEF3-209ENST00000479866 IMUPQ9GZP8 106 aa8.32□□□□□ -1.08
RAPGEF3-209ENST00000479866 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.31□□□□□ -1.08
RAPGEF3-209ENST00000479866 IGKV2-29A2NJV5 120 aaPredicted RBP8.31□□□□□ -1.08
RAPGEF3-209ENST00000479866 TRAV23DV6A0A075B6W5 121 aa8.31□□□□□ -1.08
RAPGEF3-209ENST00000479866 A0A087WVE0 104 aa8.31□□□□□ -1.08
RAPGEF3-209ENST00000479866 A0A0B4J2C4 111 aa8.31□□□□□ -1.08
RAPGEF3-209ENST00000479866 MED14OSP0DP75 135 aa8.31□□□□□ -1.08
RAPGEF3-209ENST00000479866 RPL18AQ02543 176 aaKnown RBP8.31□□□□□ -1.08
RAPGEF3-209ENST00000479866 DAZ2Q13117 558 aaKnown RBP8.31□□□□□ -1.08
RAPGEF3-209ENST00000479866 TMEM263Q8WUH6 116 aaKnown RBP8.31□□□□□ -1.08
RAPGEF3-209ENST00000479866 DAZ3Q9NR90 486 aaKnown RBP8.31□□□□□ -1.08
RAPGEF3-209ENST00000479866 ADARB2-AS1A8MUL3 147 aa8.31□□□□□ -1.08
RAPGEF3-209ENST00000479866 I3L3M4 83 aa8.31□□□□□ -1.08
RAPGEF3-209ENST00000479866 PLNP26678 52 aa8.31□□□□□ -1.08
RAPGEF3-209ENST00000479866 PRIMA1Q86XR5 153 aa8.31□□□□□ -1.08
RAPGEF3-209ENST00000479866 CLEC2BQ92478 149 aa8.31□□□□□ -1.08
RAPGEF3-209ENST00000479866 CYSRT1A8MQ03 144 aa8.3□□□□□ -1.08
RAPGEF3-209ENST00000479866 CNFNQ9BYD5 112 aa8.3□□□□□ -1.08
RAPGEF3-209ENST00000479866 OPRPNQ99935 248 aaPredicted RBP8.3□□□□□ -1.08
RAPGEF3-209ENST00000479866 C16orf74Q96GX8 76 aa8.3□□□□□ -1.08
RAPGEF3-209ENST00000479866 SERP1Q9Y6X1 66 aa8.3□□□□□ -1.08
RAPGEF3-209ENST00000479866 ACYP1P07311 99 aa8.29□□□□□ -1.08
RAPGEF3-209ENST00000479866 TIMM17AQ99595 171 aa8.29□□□□□ -1.08
RAPGEF3-209ENST00000479866 OXTP01178 125 aa8.29□□□□□ -1.08
RAPGEF3-209ENST00000479866 C11orf45Q8TAV5 145 aa8.29□□□□□ -1.08
RAPGEF3-209ENST00000479866 SNURFQ9Y675 71 aa8.29□□□□□ -1.08
RAPGEF3-209ENST00000479866 USP17L23D6RBM5 183 aa8.28□□□□□ -1.08
RAPGEF3-209ENST00000479866 NRACQ8N912 160 aa8.28□□□□□ -1.08
RAPGEF3-209ENST00000479866 ZMAT4Q9H898 229 aa8.28□□□□□ -1.08
RAPGEF3-209ENST00000479866 TRAV12-1A0A0B4J245 112 aa8.27□□□□□ -1.08
RAPGEF3-209ENST00000479866 LINC00474Q9P2X8 69 aa8.27□□□□□ -1.08
RAPGEF3-209ENST00000479866 ZNF469Q96JG9 3925 aaPredicted RBP8.27□□□□□ -1.09
RAPGEF3-209ENST00000479866 TRBV7-7A0A0K0K1E9 115 aa8.27□□□□□ -1.09
RAPGEF3-209ENST00000479866 IGHV4-30-4P0DP06 118 aa8.27□□□□□ -1.09
RAPGEF3-209ENST00000479866 FAM222AQ5U5X8 452 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms