RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 COA5Q86WW8 74 aa3.02□□□□□ -1.93
RC3H1-204ENST00000479099 C5orf56Q8N8D9 126 aa3.02□□□□□ -1.93
RC3H1-204ENST00000479099 TXNDC17Q9BRA2 123 aa3.02□□□□□ -1.93
RC3H1-204ENST00000479099 XRN1Q8IZH2 1706 aaKnown RBP3.02□□□□□ -1.93
RC3H1-204ENST00000479099 COL5A1P20908 1838 aaPredicted RBP3.01□□□□□ -1.93
RC3H1-204ENST00000479099 TRBV6-5A0A0K0K1A5 114 aa3.01□□□□□ -1.93
RC3H1-204ENST00000479099 D6R8Y8 96 aa3.01□□□□□ -1.93
RC3H1-204ENST00000479099 SPINT3P49223 89 aa3.01□□□□□ -1.93
RC3H1-204ENST00000479099 MUSTN1Q8IVN3 82 aa3.01□□□□□ -1.93
RC3H1-204ENST00000479099 LINC00304Q8N9R0 145 aa3.01□□□□□ -1.93
RC3H1-204ENST00000479099 WFDC6Q9BQY6 131 aa3.01□□□□□ -1.93
RC3H1-204ENST00000479099 UBE2D4Q9Y2X8 147 aa3.01□□□□□ -1.93
RC3H1-204ENST00000479099 CD163L1Q9NR16 1453 aa3.01□□□□□ -1.93
RC3H1-204ENST00000479099 FREM1Q5H8C1 2179 aa3.01□□□□□ -1.93
RC3H1-204ENST00000479099 PLCH1Q4KWH8 1693 aa3.01□□□□□ -1.93
RC3H1-204ENST00000479099 MDC1Q14676 2089 aaKnown RBP3□□□□□ -1.93
RC3H1-204ENST00000479099 CEP170BQ9Y4F5 1589 aaPredicted RBP3□□□□□ -1.93
RC3H1-204ENST00000479099 ANKRD36A6QL64 1941 aa3□□□□□ -1.93
RC3H1-204ENST00000479099 M0R135 149 aa3□□□□□ -1.93
RC3H1-204ENST00000479099 UQCR11O14957 56 aa3□□□□□ -1.93
RC3H1-204ENST00000479099 ATP5EP2Q5VTU8 51 aa3□□□□□ -1.93
RC3H1-204ENST00000479099 BAGE2Q86Y30 109 aa3□□□□□ -1.93
RC3H1-204ENST00000479099 CYYR1Q96J86 154 aa3□□□□□ -1.93
RC3H1-204ENST00000479099 NUP188Q5SRE5 1749 aa2.99□□□□□ -1.93
RC3H1-204ENST00000479099 SHPRHQ149N8 1683 aa2.99□□□□□ -1.93
RC3H1-204ENST00000479099 FN1P02751 2386 aaKnown RBP2.99□□□□□ -1.93
RC3H1-204ENST00000479099 FXYD4P59646 89 aa2.99□□□□□ -1.93
RC3H1-204ENST00000479099 Q6ZRN7 208 aaPredicted RBP2.99□□□□□ -1.93
RC3H1-204ENST00000479099 ZNF625Q96I27 306 aaPredicted RBP2.99□□□□□ -1.93
RC3H1-204ENST00000479099 DOCK10Q96BY6 2186 aa2.99□□□□□ -1.93
RC3H1-204ENST00000479099 RNF17Q9BXT8 1623 aaKnown RBP2.99□□□□□ -1.93
RC3H1-204ENST00000479099 CRYBG1Q9Y4K1 1723 aa2.99□□□□□ -1.93
RC3H1-204ENST00000479099 COL4A1P02462 1669 aa2.98□□□□□ -1.93
RC3H1-204ENST00000479099 ITSN2Q9NZM3 1697 aa2.98□□□□□ -1.93
RC3H1-204ENST00000479099 FANCD2Q9BXW9 1451 aa2.98□□□□□ -1.93
RC3H1-204ENST00000479099 C3orf79P0CE67 100 aa2.98□□□□□ -1.93
RC3H1-204ENST00000479099 IFI27P40305 119 aaPredicted RBP2.98□□□□□ -1.93
RC3H1-204ENST00000479099 SMIM5Q71RC9 77 aa2.98□□□□□ -1.93
RC3H1-204ENST00000479099 HILPDAQ9Y5L2 63 aa2.98□□□□□ -1.93
RC3H1-204ENST00000479099 CDC42BPGQ6DT37 1551 aa2.98□□□□□ -1.93
RC3H1-204ENST00000479099 NKTRP30414 1462 aaKnown RBP2.97□□□□□ -1.93
RC3H1-204ENST00000479099 M0R3E3 92 aa2.97□□□□□ -1.93
RC3H1-204ENST00000479099 ZNF137PP52743 207 aa2.97□□□□□ -1.93
RC3H1-204ENST00000479099 BAGE3Q86Y29 109 aa2.97□□□□□ -1.93
RC3H1-204ENST00000479099 LINC00846Q9NV44 126 aa2.97□□□□□ -1.93
RC3H1-204ENST00000479099 PLAC8Q9NZF1 115 aa2.97□□□□□ -1.93
RC3H1-204ENST00000479099 PREX1Q8TCU6 1659 aa2.97□□□□□ -1.93
RC3H1-204ENST00000479099 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
RC3H1-204ENST00000479099 PIK3C2BO00750 1634 aa2.97□□□□□ -1.93
RC3H1-204ENST00000479099 PHRF1Q9P1Y6 1649 aaKnown RBP2.97□□□□□ -1.93
RC3H1-204ENST00000479099 ALKQ9UM73 1620 aa2.97□□□□□ -1.93
RC3H1-204ENST00000479099 MGPP08493 103 aa2.96□□□□□ -1.94
RC3H1-204ENST00000479099 KRTAP10-8P60410 259 aa2.96□□□□□ -1.94
RC3H1-204ENST00000479099 LINC00208Q96KT6 92 aa2.96□□□□□ -1.94
RC3H1-204ENST00000479099 PRXQ9BXM0 1461 aa2.96□□□□□ -1.94
RC3H1-204ENST00000479099 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.95□□□□□ -1.94
RC3H1-204ENST00000479099 A0A087WVE0 104 aa2.95□□□□□ -1.94
RC3H1-204ENST00000479099 CTXND1A0A1B0GTU2 59 aa2.95□□□□□ -1.94
RC3H1-204ENST00000479099 FDCSPQ8NFU4 85 aa2.95□□□□□ -1.94
RC3H1-204ENST00000479099 Q96NJ1 140 aa2.95□□□□□ -1.94
RC3H1-204ENST00000479099 SPRR4Q96PI1 79 aa2.95□□□□□ -1.94
RC3H1-204ENST00000479099 ATP7BP35670 1465 aa2.95□□□□□ -1.94
RC3H1-204ENST00000479099 RALGAPBQ86X10 1494 aa2.95□□□□□ -1.94
RC3H1-204ENST00000479099 GLI2P10070 1586 aa2.95□□□□□ -1.94
RC3H1-204ENST00000479099 CFAP43Q8NDM7 1665 aa2.95□□□□□ -1.94
RC3H1-204ENST00000479099 PKD1L3Q7Z443 1732 aa2.94□□□□□ -1.94
RC3H1-204ENST00000479099 ZNF236Q9UL36 1845 aa2.94□□□□□ -1.94
RC3H1-204ENST00000479099 TRBV7-4A0A0J9YYF1 115 aa2.94□□□□□ -1.94
RC3H1-204ENST00000479099 KRTAP4-3Q9BYR4 195 aa2.94□□□□□ -1.94
RC3H1-204ENST00000479099 A0A1B0GUL6 1792 aa2.94□□□□□ -1.94
RC3H1-204ENST00000479099 PAPPAQ13219 1627 aa2.93□□□□□ -1.94
RC3H1-204ENST00000479099 CICQ96RK0 1608 aaPredicted RBP2.93□□□□□ -1.94
RC3H1-204ENST00000479099 WIZO95785 1651 aa2.92□□□□□ -1.94
RC3H1-204ENST00000479099 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
RC3H1-204ENST00000479099 SNURFQ9Y675 71 aa2.92□□□□□ -1.94
RC3H1-204ENST00000479099 NHSQ6T4R5 1651 aa2.92□□□□□ -1.94
RC3H1-204ENST00000479099 IFT172Q9UG01 1749 aa2.91□□□□□ -1.94
RC3H1-204ENST00000479099 GDF5OSQ5U4N7 250 aa2.91□□□□□ -1.94
RC3H1-204ENST00000479099 ALS2Q96Q42 1657 aa2.91□□□□□ -1.94
RC3H1-204ENST00000479099 MAST1Q9Y2H9 1570 aa2.91□□□□□ -1.94
RC3H1-204ENST00000479099 PARP4Q9UKK3 1724 aaKnown RBP2.9□□□□□ -1.94
RC3H1-204ENST00000479099 USP32Q8NFA0 1604 aa2.9□□□□□ -1.94
RC3H1-204ENST00000479099 C5P01031 1676 aa2.9□□□□□ -1.95
RC3H1-204ENST00000479099 TRGV1A0A0A0MS02 117 aa2.9□□□□□ -1.95
RC3H1-204ENST00000479099 H3BVH4 76 aa2.9□□□□□ -1.95
RC3H1-204ENST00000479099 HCRTO43612 131 aa2.9□□□□□ -1.95
RC3H1-204ENST00000479099 IGKV4-1P06312 121 aa2.9□□□□□ -1.95
RC3H1-204ENST00000479099 COX17Q14061 63 aa2.9□□□□□ -1.95
RC3H1-204ENST00000479099 NHSL1Q5SYE7 1610 aa2.9□□□□□ -1.95
RC3H1-204ENST00000479099 DNAJC13O75165 2243 aa2.89□□□□□ -1.95
RC3H1-204ENST00000479099 MYO7AQ13402 2215 aa2.89□□□□□ -1.95
RC3H1-204ENST00000479099 ZMYM4Q5VZL5 1548 aa2.89□□□□□ -1.95
RC3H1-204ENST00000479099 TRGV2A0A075B6R0 118 aa2.89□□□□□ -1.95
RC3H1-204ENST00000479099 FXYD6-FXYD2A0A087WZ82 144 aa2.89□□□□□ -1.95
RC3H1-204ENST00000479099 TRAV1-2A0A0B4J238 106 aa2.89□□□□□ -1.95
RC3H1-204ENST00000479099 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
RC3H1-204ENST00000479099 UBR3Q6ZT12 1888 aa2.89□□□□□ -1.95
RC3H1-204ENST00000479099 SMIM4Q8WVI0 70 aa2.89□□□□□ -1.95
RC3H1-204ENST00000479099 TSC2P49815 1807 aa2.89□□□□□ -1.95
RC3H1-204ENST00000479099 TIAM2Q8IVF5 1701 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms