RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 NOP10Q9NPE3 64 aaKnown RBP19.55■□□□□ 0.72
CHKB-208ENST00000479003 PRSS2P07478 247 aa19.54■□□□□ 0.72
CHKB-208ENST00000479003 HERVK_113P63121 156 aa19.54■□□□□ 0.72
CHKB-208ENST00000479003 COX6A2Q02221 97 aa19.54■□□□□ 0.72
CHKB-208ENST00000479003 TMEM101Q96IK0 257 aa19.54■□□□□ 0.72
CHKB-208ENST00000479003 H7C2G1 150 aa19.54■□□□□ 0.72
CHKB-208ENST00000479003 C16orf74Q96GX8 76 aa19.54■□□□□ 0.72
CHKB-208ENST00000479003 PLAC8L1A1L4L8 177 aa19.53■□□□□ 0.72
CHKB-208ENST00000479003 TMEM262E9PQX1 116 aa19.53■□□□□ 0.72
CHKB-208ENST00000479003 LINC00242Q5T6M2 205 aa19.53■□□□□ 0.72
CHKB-208ENST00000479003 NDUFA1O15239 70 aa19.52■□□□□ 0.72
CHKB-208ENST00000479003 SHISA2Q6UWI4 295 aa19.52■□□□□ 0.72
CHKB-208ENST00000479003 M0QXV9 152 aa19.51■□□□□ 0.71
CHKB-208ENST00000479003 RPL35AP18077 110 aaKnown RBP19.51■□□□□ 0.71
CHKB-208ENST00000479003 RNF183Q96D59 192 aa19.51■□□□□ 0.71
CHKB-208ENST00000479003 IGLV5-39A0A0G2JS06 123 aa19.51■□□□□ 0.71
CHKB-208ENST00000479003 GAGE12JA6NER3 117 aa19.51■□□□□ 0.71
CHKB-208ENST00000479003 GAGE4Q13068 117 aa19.51■□□□□ 0.71
CHKB-208ENST00000479003 GAGE5Q13069 117 aa19.51■□□□□ 0.71
CHKB-208ENST00000479003 Q1RN00 199 aa19.51■□□□□ 0.71
CHKB-208ENST00000479003 TRBV30A0A0K0K1B3 111 aa19.49■□□□□ 0.71
CHKB-208ENST00000479003 CSNK1G2-AS1Q8NCQ2 148 aa19.48■□□□□ 0.71
CHKB-208ENST00000479003 IFITM1P13164 125 aa19.48■□□□□ 0.71
CHKB-208ENST00000479003 CARD19Q96LW7 228 aa19.48■□□□□ 0.71
CHKB-208ENST00000479003 OVOL2Q9BRP0 275 aa19.47■□□□□ 0.71
CHKB-208ENST00000479003 CDC42SE2Q9NRR3 84 aa19.46■□□□□ 0.71
CHKB-208ENST00000479003 MT-ATP8P03928 68 aa19.46■□□□□ 0.71
CHKB-208ENST00000479003 WIPF1O43516 503 aa19.45■□□□□ 0.7
CHKB-208ENST00000479003 GAGE7O76087 117 aa19.45■□□□□ 0.7
CHKB-208ENST00000479003 GAGE12FP0CL80 117 aa19.45■□□□□ 0.7
CHKB-208ENST00000479003 GAGE12GP0CL81 117 aa19.45■□□□□ 0.7
CHKB-208ENST00000479003 GAGE12IP0CL82 117 aa19.45■□□□□ 0.7
CHKB-208ENST00000479003 SLC25A20O43772 301 aa19.45■□□□□ 0.7
CHKB-208ENST00000479003 XGP55808 180 aa19.45■□□□□ 0.7
CHKB-208ENST00000479003 PKD1L1Q8TDX9 2849 aa19.45■□□□□ 0.7
CHKB-208ENST00000479003 CMYA5Q8N3K9 4069 aa19.44■□□□□ 0.7
CHKB-208ENST00000479003 TRIAP1O43715 76 aa19.44■□□□□ 0.7
CHKB-208ENST00000479003 NPC2P61916 151 aa19.44■□□□□ 0.7
CHKB-208ENST00000479003 ATXN8Q156A1 80 aa19.44■□□□□ 0.7
CHKB-208ENST00000479003 TRGV2A0A075B6R0 118 aa19.43■□□□□ 0.7
CHKB-208ENST00000479003 C9JAW5 83 aa19.43■□□□□ 0.7
CHKB-208ENST00000479003 TRBV6-4A0A1B0GX49 114 aa19.43■□□□□ 0.7
CHKB-208ENST00000479003 SMIM1B2RUZ4 78 aa19.43■□□□□ 0.7
CHKB-208ENST00000479003 ANKRD29Q8N6D5 301 aa19.43■□□□□ 0.7
CHKB-208ENST00000479003 TRAV13-1A0A0B4J241 112 aa19.42■□□□□ 0.7
CHKB-208ENST00000479003 CIRBPQ14011 172 aaKnown RBP19.42■□□□□ 0.7
CHKB-208ENST00000479003 TMEM243Q9BU79 118 aa19.42■□□□□ 0.7
CHKB-208ENST00000479003 Q9H8V8 135 aa19.42■□□□□ 0.7
CHKB-208ENST00000479003 ICOSQ9Y6W8 199 aa19.42■□□□□ 0.7
CHKB-208ENST00000479003 OXLD1Q5BKU9 147 aa19.4■□□□□ 0.7
CHKB-208ENST00000479003 UBE2L6O14933 153 aa19.39■□□□□ 0.69
CHKB-208ENST00000479003 LINC01620Q4KN68 170 aa19.39■□□□□ 0.69
CHKB-208ENST00000479003 H7C423 109 aa19.39■□□□□ 0.69
CHKB-208ENST00000479003 DAND5Q8N907 189 aa19.39■□□□□ 0.69
CHKB-208ENST00000479003 LINC01600Q96MT4 127 aa19.39■□□□□ 0.69
CHKB-208ENST00000479003 LOC100131303A0A0U1RQF7 123 aa19.38■□□□□ 0.69
CHKB-208ENST00000479003 F5H768 121 aa19.38■□□□□ 0.69
CHKB-208ENST00000479003 ANK2Q01484 3957 aa19.38■□□□□ 0.69
CHKB-208ENST00000479003 ANAPC13Q9BS18 74 aa19.38■□□□□ 0.69
CHKB-208ENST00000479003 GAGE6Q13070 117 aa19.36■□□□□ 0.69
CHKB-208ENST00000479003 TRGV4A0A0C4DH28 118 aa19.36■□□□□ 0.69
CHKB-208ENST00000479003 LINC00308Q8TCZ7 52 aa19.35■□□□□ 0.69
CHKB-208ENST00000479003 ZNF625Q96I27 306 aaPredicted RBP19.34■□□□□ 0.69
CHKB-208ENST00000479003 FHL2Q14192 279 aa19.34■□□□□ 0.69
CHKB-208ENST00000479003 COX6CP09669 75 aa19.33■□□□□ 0.69
CHKB-208ENST00000479003 RPL13AP40429 203 aaKnown RBP19.33■□□□□ 0.68
CHKB-208ENST00000479003 TRBV10-2A0A0K0K1G8 114 aa19.32■□□□□ 0.68
CHKB-208ENST00000479003 KRTAP10-11P60412 298 aa19.3■□□□□ 0.68
CHKB-208ENST00000479003 HERV-K104P63124 156 aa19.3■□□□□ 0.68
CHKB-208ENST00000479003 Q6Q795 121 aa19.3■□□□□ 0.68
CHKB-208ENST00000479003 COPS9Q8WXC6 57 aa19.3■□□□□ 0.68
CHKB-208ENST00000479003 TRBV6-8A0A0A6YYG3 113 aa19.27■□□□□ 0.67
CHKB-208ENST00000479003 MEIG1Q5JSS6 88 aa19.27■□□□□ 0.67
CHKB-208ENST00000479003 SOSTDC1Q6X4U4 206 aa19.27■□□□□ 0.67
CHKB-208ENST00000479003 A0A0U1RRA0 63 aa19.26■□□□□ 0.67
CHKB-208ENST00000479003 MDFIQ99750 246 aa19.26■□□□□ 0.67
CHKB-208ENST00000479003 NBEAL2Q6ZNJ1 2754 aa19.26■□□□□ 0.67
CHKB-208ENST00000479003 NTN5Q8WTR8 489 aaPredicted RBP19.25■□□□□ 0.67
CHKB-208ENST00000479003 LST1O00453 97 aa19.25■□□□□ 0.67
CHKB-208ENST00000479003 IGHV4-30-4P0DP06 118 aa19.24■□□□□ 0.67
CHKB-208ENST00000479003 EGFEM1PQ0D2K5 195 aa19.24■□□□□ 0.67
CHKB-208ENST00000479003 KIR2DL5BQ8NHK3 375 aa19.24■□□□□ 0.67
CHKB-208ENST00000479003 PPDPFQ9H3Y8 114 aa19.24■□□□□ 0.67
CHKB-208ENST00000479003 CLEC2BQ92478 149 aa19.24■□□□□ 0.67
CHKB-208ENST00000479003 LINC00612Q8N6U2 182 aa19.23■□□□□ 0.67
CHKB-208ENST00000479003 GAGE2BQ13066 116 aa19.22■□□□□ 0.67
CHKB-208ENST00000479003 GAGE2EQ4V326 116 aa19.22■□□□□ 0.67
CHKB-208ENST00000479003 GAGE2DQ9UEU5 116 aa19.22■□□□□ 0.67
CHKB-208ENST00000479003 SNCGO76070 127 aa19.22■□□□□ 0.67
CHKB-208ENST00000479003 IGLV4-60A0A075B6I1 120 aa19.21■□□□□ 0.67
CHKB-208ENST00000479003 H3BT86 120 aa19.21■□□□□ 0.67
CHKB-208ENST00000479003 C2orf82Q6UX34 121 aa19.2■□□□□ 0.66
CHKB-208ENST00000479003 CHCHD5Q9BSY4 110 aa19.2■□□□□ 0.66
CHKB-208ENST00000479003 COX7B2Q8TF08 81 aa19.19■□□□□ 0.66
CHKB-208ENST00000479003 APOC4P55056 127 aa19.19■□□□□ 0.66
CHKB-208ENST00000479003 DEFB135Q30KP9 77 aa19.19■□□□□ 0.66
CHKB-208ENST00000479003 DEFB130BP0DP73 79 aa19.18■□□□□ 0.66
CHKB-208ENST00000479003 DEFB130AP0DP74 79 aa19.18■□□□□ 0.66
CHKB-208ENST00000479003 DNAH3Q8TD57 4116 aa19.18■□□□□ 0.66
CHKB-208ENST00000479003 NDUFV3P56181 108 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms