RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 IGKV2-24A0A0C4DH68 120 aa10.33□□□□□ -0.76
NPHP4-208ENST00000478423 IBA57-AS1B1ANH7 110 aa10.33□□□□□ -0.76
NPHP4-208ENST00000478423 SPANXB1Q9NS25 103 aaPredicted RBP10.33□□□□□ -0.76
NPHP4-208ENST00000478423 VPS13AQ96RL7 3174 aa10.33□□□□□ -0.76
NPHP4-208ENST00000478423 PTPRBP23467 1997 aa10.33□□□□□ -0.76
NPHP4-208ENST00000478423 IGIPA6NJ69 53 aa10.33□□□□□ -0.76
NPHP4-208ENST00000478423 IGHV4-30-4P0DP06 118 aa10.33□□□□□ -0.76
NPHP4-208ENST00000478423 XAGE1AQ9HD64 81 aa10.33□□□□□ -0.76
NPHP4-208ENST00000478423 FREM2Q5SZK8 3169 aa10.32□□□□□ -0.76
NPHP4-208ENST00000478423 WDFY4Q6ZS81 3184 aa10.32□□□□□ -0.76
NPHP4-208ENST00000478423 C1orf158Q8N1D5 194 aa10.32□□□□□ -0.76
NPHP4-208ENST00000478423 PRB2P02812 416 aaPredicted RBP10.32□□□□□ -0.76
NPHP4-208ENST00000478423 KPRPQ5T749 579 aaPredicted RBP10.32□□□□□ -0.76
NPHP4-208ENST00000478423 UBE2D3P61077 147 aa10.32□□□□□ -0.76
NPHP4-208ENST00000478423 UBE2D2P62837 147 aa10.32□□□□□ -0.76
NPHP4-208ENST00000478423 JMJD7-PLA2G4BH0Y9G9 81 aa10.31□□□□□ -0.76
NPHP4-208ENST00000478423 TRACP01848 142 aa10.31□□□□□ -0.76
NPHP4-208ENST00000478423 CELSR3Q9NYQ7 3312 aa10.31□□□□□ -0.76
NPHP4-208ENST00000478423 MGAQ8IWI9 3026 aa10.31□□□□□ -0.76
NPHP4-208ENST00000478423 ZNF292O60281 2723 aa10.31□□□□□ -0.76
NPHP4-208ENST00000478423 LINC00526Q96FQ7 95 aa10.3□□□□□ -0.76
NPHP4-208ENST00000478423 IGKV3D-7A0A0C4DH55 119 aa10.3□□□□□ -0.76
NPHP4-208ENST00000478423 MRPS36P82909 103 aaKnown RBP10.3□□□□□ -0.76
NPHP4-208ENST00000478423 CFAP46Q8IYW2 2715 aa10.3□□□□□ -0.76
NPHP4-208ENST00000478423 CITED1Q99966 193 aa10.29□□□□□ -0.76
NPHP4-208ENST00000478423 HELZ2Q9BYK8 2649 aaKnown RBP10.29□□□□□ -0.76
NPHP4-208ENST00000478423 LINC00959A0A1B0GUT2 108 aa10.29□□□□□ -0.76
NPHP4-208ENST00000478423 UBE2D1P51668 147 aa10.29□□□□□ -0.76
NPHP4-208ENST00000478423 CD164L2Q6UWJ8 174 aa10.29□□□□□ -0.76
NPHP4-208ENST00000478423 SPANXDQ9BXN6 97 aa10.29□□□□□ -0.76
NPHP4-208ENST00000478423 RBM3P98179 157 aaKnown RBP10.28□□□□□ -0.76
NPHP4-208ENST00000478423 CDC42SE2Q9NRR3 84 aa10.28□□□□□ -0.76
NPHP4-208ENST00000478423 VCANP13611 3396 aa10.28□□□□□ -0.76
NPHP4-208ENST00000478423 TMEM256-PLSCR3K7ERE1 68 aa10.28□□□□□ -0.76
NPHP4-208ENST00000478423 UBE2AP49459 152 aa10.28□□□□□ -0.76
NPHP4-208ENST00000478423 CLUHP3Q96NS8 147 aa10.28□□□□□ -0.76
NPHP4-208ENST00000478423 FLNAP21333 2647 aaKnown RBP10.28□□□□□ -0.76
NPHP4-208ENST00000478423 A0A096LNJ9 63 aa10.27□□□□□ -0.76
NPHP4-208ENST00000478423 TRIAP1O43715 76 aa10.27□□□□□ -0.76
NPHP4-208ENST00000478423 COX7BP24311 80 aa10.27□□□□□ -0.76
NPHP4-208ENST00000478423 LELP1Q5T871 98 aa10.27□□□□□ -0.76
NPHP4-208ENST00000478423 TRAV10A0A0B4J240 114 aa10.27□□□□□ -0.77
NPHP4-208ENST00000478423 IL17DQ8TAD2 202 aa10.27□□□□□ -0.77
NPHP4-208ENST00000478423 C16orf95Q9H693 158 aa10.27□□□□□ -0.77
NPHP4-208ENST00000478423 LINC00242Q5T6M2 205 aa10.26□□□□□ -0.77
NPHP4-208ENST00000478423 G3V4G9 280 aa10.25□□□□□ -0.77
NPHP4-208ENST00000478423 NREPQ16612 68 aa10.25□□□□□ -0.77
NPHP4-208ENST00000478423 C14orf132Q9NPU4 83 aa10.25□□□□□ -0.77
NPHP4-208ENST00000478423 SYCNQ0VAF6 134 aa10.25□□□□□ -0.77
NPHP4-208ENST00000478423 POM121L12Q8N7R1 296 aa10.25□□□□□ -0.77
NPHP4-208ENST00000478423 SPEGQ15772 3267 aa10.24□□□□□ -0.77
NPHP4-208ENST00000478423 TEX49A0A1B0GTD5 131 aa10.24□□□□□ -0.77
NPHP4-208ENST00000478423 H3BQ85 93 aa10.24□□□□□ -0.77
NPHP4-208ENST00000478423 HIGD2AQ9BW72 106 aa10.24□□□□□ -0.77
NPHP4-208ENST00000478423 TIMM17BO60830 172 aa10.24□□□□□ -0.77
NPHP4-208ENST00000478423 ITPR3Q14573 2671 aa10.24□□□□□ -0.77
NPHP4-208ENST00000478423 C6orf99Q4VX62 202 aa10.23□□□□□ -0.77
NPHP4-208ENST00000478423 TRBV30A0A0K0K1B3 111 aa10.23□□□□□ -0.77
NPHP4-208ENST00000478423 C14orf177Q52M58 125 aa10.23□□□□□ -0.77
NPHP4-208ENST00000478423 NANOS2P60321 138 aaKnown RBP10.22□□□□□ -0.77
NPHP4-208ENST00000478423 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.22□□□□□ -0.77
NPHP4-208ENST00000478423 IGLV2-18A0A075B6J9 118 aa10.22□□□□□ -0.77
NPHP4-208ENST00000478423 SLPIP03973 132 aa10.22□□□□□ -0.77
NPHP4-208ENST00000478423 LINC00694P0DN24 101 aa10.22□□□□□ -0.77
NPHP4-208ENST00000478423 FAM236AA0A1B0GUQ0 79 aa10.21□□□□□ -0.77
NPHP4-208ENST00000478423 FAM236BA0A1B0GV22 79 aa10.21□□□□□ -0.77
NPHP4-208ENST00000478423 A0A0J9YWU9 116 aa10.21□□□□□ -0.77
NPHP4-208ENST00000478423 CHCHD7Q9BUK0 85 aa10.21□□□□□ -0.78
NPHP4-208ENST00000478423 RETNQ9HD89 108 aa10.21□□□□□ -0.78
NPHP4-208ENST00000478423 BEAN1Q3B7T3 259 aa10.21□□□□□ -0.78
NPHP4-208ENST00000478423 Q6ZSN1 163 aa10.21□□□□□ -0.78
NPHP4-208ENST00000478423 IGLV4-69A0A075B6H9 119 aa10.2□□□□□ -0.78
NPHP4-208ENST00000478423 RNF183Q96D59 192 aa10.2□□□□□ -0.78
NPHP4-208ENST00000478423 B5MCH6 92 aa10.19□□□□□ -0.78
NPHP4-208ENST00000478423 FHL2Q14192 279 aa10.19□□□□□ -0.78
NPHP4-208ENST00000478423 Q8N2B8 174 aa10.19□□□□□ -0.78
NPHP4-208ENST00000478423 IGLV4-60A0A075B6I1 120 aa10.19□□□□□ -0.78
NPHP4-208ENST00000478423 MAP1AP78559 2803 aaPredicted RBP10.19□□□□□ -0.78
NPHP4-208ENST00000478423 A0A1B0GX51 115 aa10.18□□□□□ -0.78
NPHP4-208ENST00000478423 PDE6GP18545 87 aa10.18□□□□□ -0.78
NPHP4-208ENST00000478423 SZT2Q5T011 3432 aa10.18□□□□□ -0.78
NPHP4-208ENST00000478423 SMIM1B2RUZ4 78 aa10.17□□□□□ -0.78
NPHP4-208ENST00000478423 KIF25-AS1Q9Y6Z4 181 aa10.17□□□□□ -0.78
NPHP4-208ENST00000478423 NDUFS5O43920 106 aa10.16□□□□□ -0.78
NPHP4-208ENST00000478423 LINC00643Q86TS7 51 aa10.16□□□□□ -0.78
NPHP4-208ENST00000478423 LAMA1P25391 3075 aa10.16□□□□□ -0.78
NPHP4-208ENST00000478423 TSPEAR-AS2P59090 65 aa10.16□□□□□ -0.78
NPHP4-208ENST00000478423 FAM19A5Q7Z5A7 132 aaPredicted RBP10.16□□□□□ -0.78
NPHP4-208ENST00000478423 Q8IZM0 81 aa10.16□□□□□ -0.78
NPHP4-208ENST00000478423 CYSRT1A8MQ03 144 aa10.15□□□□□ -0.78
NPHP4-208ENST00000478423 Q6ZTC4 211 aa10.15□□□□□ -0.78
NPHP4-208ENST00000478423 AMELXQ99217 191 aa10.15□□□□□ -0.78
NPHP4-208ENST00000478423 COL27A1Q8IZC6 1860 aaPredicted RBP10.15□□□□□ -0.78
NPHP4-208ENST00000478423 A0A096LNI7 61 aa10.15□□□□□ -0.79
NPHP4-208ENST00000478423 COX6A2Q02221 97 aa10.15□□□□□ -0.79
NPHP4-208ENST00000478423 ATOX1O00244 68 aa10.14□□□□□ -0.79
NPHP4-208ENST00000478423 IGKV2-28A0A075B6P5 120 aa10.14□□□□□ -0.79
NPHP4-208ENST00000478423 NDUFB1O75438 58 aa10.14□□□□□ -0.79
NPHP4-208ENST00000478423 IGKV2D-28P01615 120 aa10.14□□□□□ -0.79
NPHP4-208ENST00000478423 A0A087WZ39 114 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms