RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 KRTAP19-8Q3LI54 63 aa-0.44□□□□□ -2.48
SYCP3-205ENST00000478238 DEFB105AQ8NG35 78 aa-0.44□□□□□ -2.48
SYCP3-205ENST00000478238 SNRNP25Q9BV90 132 aaKnown RBP-0.44□□□□□ -2.48
SYCP3-205ENST00000478238 NAA60Q9H7X0 242 aa-0.44□□□□□ -2.48
SYCP3-205ENST00000478238 GAPVD1Q14C86 1478 aa-0.44□□□□□ -2.48
SYCP3-205ENST00000478238 DNAJC13O75165 2243 aa-0.44□□□□□ -2.48
SYCP3-205ENST00000478238 SETD2Q9BYW2 2564 aaPredicted RBP-0.45□□□□□ -2.48
SYCP3-205ENST00000478238 IQSEC2Q5JU85 1478 aa-0.45□□□□□ -2.48
SYCP3-205ENST00000478238 LINC00959A0A1B0GUT2 108 aa-0.45□□□□□ -2.48
SYCP3-205ENST00000478238 CATR1Q13166 79 aa-0.45□□□□□ -2.48
SYCP3-205ENST00000478238 MRPL54Q6P161 138 aaKnown RBP-0.45□□□□□ -2.48
SYCP3-205ENST00000478238 ARL11Q969Q4 196 aa-0.45□□□□□ -2.48
SYCP3-205ENST00000478238 PPP3R2Q96LZ3 170 aa-0.45□□□□□ -2.48
SYCP3-205ENST00000478238 SPANXDQ9BXN6 97 aa-0.45□□□□□ -2.48
SYCP3-205ENST00000478238 LINC00470Q9BZP3 86 aa-0.45□□□□□ -2.48
SYCP3-205ENST00000478238 LINC00474Q9P2X8 69 aa-0.45□□□□□ -2.48
SYCP3-205ENST00000478238 NUP188Q5SRE5 1749 aa-0.45□□□□□ -2.48
SYCP3-205ENST00000478238 HMGXB3Q12766 1538 aa-0.45□□□□□ -2.48
SYCP3-205ENST00000478238 TULP4Q9NRJ4 1543 aa-0.45□□□□□ -2.48
SYCP3-205ENST00000478238 KIAA0556O60303 1618 aa-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 USH2AO75445 5202 aa-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 CUL7Q14999 1698 aa-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 QRICH2Q9H0J4 1663 aa-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 ANKRD36A6QL64 1941 aa-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 MBD5Q9P267 1494 aa-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 TRBV7-4A0A0J9YYF1 115 aa-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 LOC100130705A0A1B0GUX0 176 aa-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 LOC285095A0A1B0GVY8 99 aa-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 CHKB-CPT1BH3BT56 60 aa-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 MGPP08493 103 aa-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 IGLC1P0CG04 106 aa-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 UBA52P62987 128 aaKnown RBP-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 SELENOWP63302 87 aa-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 Q56UQ5 140 aa-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 C10orf113Q5VZT2 155 aa-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 TMEM263Q8WUH6 116 aaKnown RBP-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 PAIP2BQ9ULR5 123 aaKnown RBP-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 PDCD11Q14690 1871 aaKnown RBP-0.46□□□□□ -2.48
SYCP3-205ENST00000478238 RYR3Q15413 4870 aa-0.47□□□□□ -2.48
SYCP3-205ENST00000478238 MARF1Q9Y4F3 1742 aaKnown RBP-0.47□□□□□ -2.48
SYCP3-205ENST00000478238 PAPPA2Q9BXP8 1791 aa-0.47□□□□□ -2.48
SYCP3-205ENST00000478238 APOC2P02655 101 aa-0.47□□□□□ -2.48
SYCP3-205ENST00000478238 KRTAP6-2Q3LI66 62 aa-0.47□□□□□ -2.48
SYCP3-205ENST00000478238 COMMD6Q7Z4G1 85 aa-0.47□□□□□ -2.48
SYCP3-205ENST00000478238 FAM223AQ8IWN6 122 aa-0.47□□□□□ -2.48
SYCP3-205ENST00000478238 C8orf59Q8N0T1 100 aaPredicted RBP-0.47□□□□□ -2.48
SYCP3-205ENST00000478238 FDCSPQ8NFU4 85 aa-0.47□□□□□ -2.48
SYCP3-205ENST00000478238 SPRR4Q96PI1 79 aa-0.47□□□□□ -2.48
SYCP3-205ENST00000478238 NXT2Q9NPJ8 142 aaKnown RBP-0.47□□□□□ -2.48
SYCP3-205ENST00000478238 FAIMQ9NVQ4 179 aa-0.47□□□□□ -2.48
SYCP3-205ENST00000478238 ARL2-SNX15V9GYD0 113 aa-0.47□□□□□ -2.48
SYCP3-205ENST00000478238 NBPF19A0A087WUL8 3843 aa-0.47□□□□□ -2.49
SYCP3-205ENST00000478238 HERC1Q15751 4861 aa-0.47□□□□□ -2.49
SYCP3-205ENST00000478238 MAGI1Q96QZ7 1491 aaPredicted RBP-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 PKHD1P08F94 4074 aa-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 OOSP1A8MZH6 123 aa-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 SYS1-DBNDD2H3BUS1 97 aa-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 NDUFA2O43678 99 aa-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 SSSCA1O60232 199 aa-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 IFNGP01579 166 aa-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 BTG2P78543 158 aa-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 CCDC58Q4VC31 144 aa-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 C5orf38Q86SI9 138 aa-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 MYOZ3Q8TDC0 251 aa-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 LCN9Q8WX39 176 aa-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 LINC01600Q96MT4 127 aa-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 CDC42SE2Q9NRR3 84 aa-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 APLNQ9ULZ1 77 aa-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 XRN1Q8IZH2 1706 aaKnown RBP-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 PCNX1Q96RV3 2341 aa-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 MXRA5Q9NR99 2828 aa-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 SMG6Q86US8 1419 aaKnown RBP-0.48□□□□□ -2.49
SYCP3-205ENST00000478238 SETBP1Q9Y6X0 1596 aa-0.49□□□□□ -2.49
SYCP3-205ENST00000478238 TOP2BQ02880 1626 aa-0.49□□□□□ -2.49
SYCP3-205ENST00000478238 SFTA2Q6UW10 78 aa-0.49□□□□□ -2.49
SYCP3-205ENST00000478238 UQCR10Q9UDW1 63 aa-0.49□□□□□ -2.49
SYCP3-205ENST00000478238 NAIPQ13075 1403 aa-0.49□□□□□ -2.49
SYCP3-205ENST00000478238 C1orf167Q5SNV9 1468 aa-0.49□□□□□ -2.49
SYCP3-205ENST00000478238 A0A0G2JMZ2 1700 aa-0.5□□□□□ -2.49
SYCP3-205ENST00000478238 UBR4Q5T4S7 5183 aa-0.5□□□□□ -2.49
SYCP3-205ENST00000478238 CPSF4LA6NMK7 179 aaKnown RBP-0.5□□□□□ -2.49
SYCP3-205ENST00000478238 COX8AP10176 69 aa-0.5□□□□□ -2.49
SYCP3-205ENST00000478238 FGF7P21781 194 aa-0.5□□□□□ -2.49
SYCP3-205ENST00000478238 SPRR2AP35326 72 aa-0.5□□□□□ -2.49
SYCP3-205ENST00000478238 WHAMMP3Q1A5X7 153 aa-0.5□□□□□ -2.49
SYCP3-205ENST00000478238 KRTAP20-2Q3LI61 65 aa-0.5□□□□□ -2.49
SYCP3-205ENST00000478238 USMG5Q96IX5 58 aa-0.5□□□□□ -2.49
SYCP3-205ENST00000478238 FAM167A-AS1Q96KT0 104 aa-0.5□□□□□ -2.49
SYCP3-205ENST00000478238 FAM107BQ9H098 131 aa-0.5□□□□□ -2.49
SYCP3-205ENST00000478238 EHBP1L1Q8N3D4 1523 aa-0.5□□□□□ -2.49
SYCP3-205ENST00000478238 KIAA1109Q2LD37 5005 aa-0.51□□□□□ -2.49
SYCP3-205ENST00000478238 UBE2L5PA0A1B0GUS4 154 aa-0.51□□□□□ -2.49
SYCP3-205ENST00000478238 AKAIN1P0CW23 69 aa-0.51□□□□□ -2.49
SYCP3-205ENST00000478238 GNG11P61952 73 aa-0.51□□□□□ -2.49
SYCP3-205ENST00000478238 UBE2L3P68036 154 aaKnown RBP-0.51□□□□□ -2.49
SYCP3-205ENST00000478238 COL14A1Q05707 1796 aaKnown RBP-0.51□□□□□ -2.49
SYCP3-205ENST00000478238 DEFB135Q30KP9 77 aa-0.51□□□□□ -2.49
SYCP3-205ENST00000478238 DOPEY1Q5JWR5 2465 aa-0.51□□□□□ -2.49
SYCP3-205ENST00000478238 C9orf153Q5TBE3 101 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms